RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 TREM1Q9NP99 234 aa5.95□□□□□ -1.46
PNKP-229ENST00000637897 ENY2Q9NPA8 101 aa5.95□□□□□ -1.46
PNKP-229ENST00000637897 HEYLQ9NQ87 328 aaPredicted RBP5.95□□□□□ -1.46
PNKP-229ENST00000637897 UQCC1Q9NVA1 299 aa5.95□□□□□ -1.46
PNKP-229ENST00000637897 GAR1Q9NY12 217 aaKnown RBP5.95□□□□□ -1.46
PNKP-229ENST00000637897 KLK9Q9UKQ9 250 aa5.95□□□□□ -1.46
PNKP-229ENST00000637897 SMAD5-AS1Q9Y6J3 95 aa5.95□□□□□ -1.46
PNKP-229ENST00000637897 PLECQ15149 4684 aaKnown RBP5.94□□□□□ -1.46
PNKP-229ENST00000637897 TRAV1-1A0A0B4J248 108 aa5.94□□□□□ -1.46
PNKP-229ENST00000637897 UBE2L5PA0A1B0GUS4 154 aa5.94□□□□□ -1.46
PNKP-229ENST00000637897 C15orf62A8K5M9 175 aa5.94□□□□□ -1.46
PNKP-229ENST00000637897 PMS2P5A8MQ11 134 aa5.94□□□□□ -1.46
PNKP-229ENST00000637897 MPDU1O75352 247 aa5.94□□□□□ -1.46
PNKP-229ENST00000637897 KBTBD11O94819 623 aa5.94□□□□□ -1.46
PNKP-229ENST00000637897 IFNA10P01566 189 aa5.94□□□□□ -1.46
PNKP-229ENST00000637897 CD5P06127 495 aa5.94□□□□□ -1.46
PNKP-229ENST00000637897 H2AFB1P0C5Y9 115 aa5.94□□□□□ -1.46
PNKP-229ENST00000637897 SNCAP37840 140 aa5.94□□□□□ -1.46
PNKP-229ENST00000637897 SYNJ2BPP57105 145 aa5.94□□□□□ -1.46
PNKP-229ENST00000637897 DLK1P80370 383 aa5.94□□□□□ -1.46
PNKP-229ENST00000637897 PEA15Q15121 130 aa5.94□□□□□ -1.46
PNKP-229ENST00000637897 VWC2Q2TAL6 325 aa5.94□□□□□ -1.46
PNKP-229ENST00000637897 TTC9CQ8N5M4 171 aa5.94□□□□□ -1.46
PNKP-229ENST00000637897 ZNF709Q8N972 641 aa5.94□□□□□ -1.46
PNKP-229ENST00000637897 OR5B3Q8NH48 314 aa5.94□□□□□ -1.46
PNKP-229ENST00000637897 SEC11CQ9BY50 192 aa5.94□□□□□ -1.46
PNKP-229ENST00000637897 SMDT1Q9H4I9 107 aa5.94□□□□□ -1.46
PNKP-229ENST00000637897 OR51B2Q9Y5P1 312 aa5.94□□□□□ -1.46
PNKP-229ENST00000637897 C17orf112F2Z3M2 114 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 NDUFB8O95169 186 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 CNIH1O95406 144 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 MBP02144 154 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 APOC3P02656 99 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 IGHV4-30-4P0DP06 118 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 AREGP15514 252 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 M6PRP20645 277 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 FGF7P21781 194 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 FHITP49789 147 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 PRCDQ00LT1 54 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 TNXAQ16473 311 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 VMA21Q3ZAQ7 101 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 TMEM41BQ5BJD5 291 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 SPINK9Q5DT21 86 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 C10orf91Q5T1B1 145 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 LINC00322Q6ZN03 302 aaPredicted RBP5.93□□□□□ -1.46
PNKP-229ENST00000637897 SVBPQ8N300 66 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 OR9G4Q8NGQ1 327 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 TMEM167AQ8TBQ9 72 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 CCDC140Q96MF4 163 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 TMEM68Q96MH6 324 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 TM2D3Q9BRN9 247 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 RSG1Q9BU20 258 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 PLEKHA3Q9HB20 300 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 KCNIP2Q9NS61 270 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 ZNF355PQ9NSJ1 428 aa5.93□□□□□ -1.46
PNKP-229ENST00000637897 PEF1Q9UBV8 284 aaKnown RBP5.93□□□□□ -1.46
PNKP-229ENST00000637897 CARHSP1Q9Y2V2 147 aaKnown RBP5.93□□□□□ -1.46
PNKP-229ENST00000637897 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.92□□□□□ -1.46
PNKP-229ENST00000637897 ZNF785A8K8V0 405 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 A8MZ25 164 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 PPP5D1E7EU14 171 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 FNDC10F2Z333 226 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 F8W036 122 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 INS-IGF2F8WCM5 200 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 AGPAT2O15120 278 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 OR2J3O76001 311 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 IFNA4P05014 189 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 CRYGCP07315 174 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 NPY1RP25929 384 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 RPL8P62917 257 aaKnown RBP5.92□□□□□ -1.46
PNKP-229ENST00000637897 RHOGP84095 191 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 GUK1Q16774 197 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 SLC24A4Q8NFF2 622 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 OR1L8Q8NGR8 309 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 SFT2D1Q8WV19 159 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 MBD3L1Q8WWY6 194 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 RCHY1Q96PM5 261 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 COMMD5Q9GZQ3 224 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 EIF5A2Q9GZV4 153 aaKnown RBP5.92□□□□□ -1.46
PNKP-229ENST00000637897 EDA2RQ9HAV5 297 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 SIGLEC8Q9NYZ4 499 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 ZMAT5Q9UDW3 170 aaKnown RBP5.92□□□□□ -1.46
PNKP-229ENST00000637897 WDR83OSQ9Y284 106 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 SELENOKQ9Y6D0 94 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 S4R3C0 116 aa5.92□□□□□ -1.46
PNKP-229ENST00000637897 TEX50A0A1B0GTY4 177 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 IGLC7A0M8Q6 106 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 PRSS46E5RG02 174 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 SNAPINO95295 136 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 IGHV3-23P01764 117 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 SFTA3P0C7M3 94 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 CTRB1P17538 263 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 MAS1LP35410 378 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 MFAP2P55001 183 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 ERHP84090 104 aaKnown RBP5.91□□□□□ -1.46
PNKP-229ENST00000637897 SRSF3P84103 164 aaKnown RBP5.91□□□□□ -1.46
PNKP-229ENST00000637897 AKR1C1Q04828 323 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 RAB31Q13636 194 aa5.91□□□□□ -1.46
PNKP-229ENST00000637897 ACOT6Q3I5F7 207 aaPredicted RBP5.91□□□□□ -1.46
PNKP-229ENST00000637897 C2orf83Q53S99 150 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms