RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 H3BMM0 161 aa13.32□□□□□ -0.28
CLN6-220ENST00000637450 GSTZ1O43708 216 aaPredicted RBP13.32□□□□□ -0.28
CLN6-220ENST00000637450 PSG1P11464 419 aa13.32□□□□□ -0.28
CLN6-220ENST00000637450 CCR6P51684 374 aa13.32□□□□□ -0.28
CLN6-220ENST00000637450 NUTF2P61970 127 aaKnown RBP13.32□□□□□ -0.28
CLN6-220ENST00000637450 CENPSQ8N2Z9 138 aa13.32□□□□□ -0.28
CLN6-220ENST00000637450 SCGB3A2Q96PL1 93 aa13.32□□□□□ -0.28
CLN6-220ENST00000637450 HSPB7Q9UBY9 170 aa13.32□□□□□ -0.28
CLN6-220ENST00000637450 SCP2D1Q9UJQ7 156 aa13.32□□□□□ -0.28
CLN6-220ENST00000637450 A0A0B4J2A0 478 aa13.31□□□□□ -0.28
CLN6-220ENST00000637450 SMCO1Q147U7 214 aa13.31□□□□□ -0.28
CLN6-220ENST00000637450 LYZL2Q7Z4W2 148 aa13.31□□□□□ -0.28
CLN6-220ENST00000637450 LGI3Q8N145 548 aa13.31□□□□□ -0.28
CLN6-220ENST00000637450 OR51G1Q8NGK1 321 aa13.31□□□□□ -0.28
CLN6-220ENST00000637450 DYNC2LI1Q8TCX1 351 aa13.31□□□□□ -0.28
CLN6-220ENST00000637450 DTD1Q8TEA8 209 aa13.31□□□□□ -0.28
CLN6-220ENST00000637450 C1QTNF4Q9BXJ3 329 aa13.31□□□□□ -0.28
CLN6-220ENST00000637450 RBKSQ9H477 322 aa13.31□□□□□ -0.28
CLN6-220ENST00000637450 SHPKQ9UHJ6 478 aa13.31□□□□□ -0.28
CLN6-220ENST00000637450 DNAH2Q9P225 4427 aa13.3□□□□□ -0.28
CLN6-220ENST00000637450 IGHV4-4A0A075B6R2 117 aa13.3□□□□□ -0.28
CLN6-220ENST00000637450 SUPT4H1P63272 117 aaKnown RBP13.3□□□□□ -0.28
CLN6-220ENST00000637450 KLF9Q13886 244 aaPredicted RBP13.3□□□□□ -0.28
CLN6-220ENST00000637450 C12orf74Q32Q52 190 aa13.3□□□□□ -0.28
CLN6-220ENST00000637450 RNF125Q96EQ8 232 aa13.3□□□□□ -0.28
CLN6-220ENST00000637450 RNF126Q9BV68 326 aa13.3□□□□□ -0.28
CLN6-220ENST00000637450 CCDC59Q9P031 241 aaKnown RBP13.3□□□□□ -0.28
CLN6-220ENST00000637450 XCL2Q9UBD3 114 aa13.3□□□□□ -0.28
CLN6-220ENST00000637450 CELA1Q9UNI1 258 aa13.3□□□□□ -0.28
CLN6-220ENST00000637450 DNAH17Q9UFH2 4485 aa13.3□□□□□ -0.28
CLN6-220ENST00000637450 AKR1C4P17516 323 aa13.29□□□□□ -0.28
CLN6-220ENST00000637450 NKX2-1P43699 371 aaPredicted RBP13.29□□□□□ -0.28
CLN6-220ENST00000637450 ATP5IP56385 69 aaPredicted RBP13.29□□□□□ -0.28
CLN6-220ENST00000637450 RAB2BQ8WUD1 216 aa13.29□□□□□ -0.28
CLN6-220ENST00000637450 SOSTQ9BQB4 213 aa13.29□□□□□ -0.28
CLN6-220ENST00000637450 RSL24D1Q9UHA3 163 aaKnown RBP13.29□□□□□ -0.28
CLN6-220ENST00000637450 FAT2Q9NYQ8 4349 aa13.29□□□□□ -0.28
CLN6-220ENST00000637450 KIAA1109Q2LD37 5005 aa13.28□□□□□ -0.28
CLN6-220ENST00000637450 IGKV1D-37A0A075B6S9 117 aa13.28□□□□□ -0.28
CLN6-220ENST00000637450 HLA-DRB4P13762 266 aa13.28□□□□□ -0.28
CLN6-220ENST00000637450 GPX4P36969 197 aaPredicted RBP13.28□□□□□ -0.28
CLN6-220ENST00000637450 NUP62P37198 522 aaPredicted RBP13.28□□□□□ -0.28
CLN6-220ENST00000637450 GAMTQ14353 236 aa13.28□□□□□ -0.28
CLN6-220ENST00000637450 OR8G2PQ6IF36 304 aa13.28□□□□□ -0.28
CLN6-220ENST00000637450 KRTAP17-1Q9BYP8 105 aa13.28□□□□□ -0.28
CLN6-220ENST00000637450 MCUBQ9NWR8 336 aa13.28□□□□□ -0.28
CLN6-220ENST00000637450 HLA-DRB4X5D2U9 266 aa13.28□□□□□ -0.28
CLN6-220ENST00000637450 DEFB131BA0A096LNP1 70 aa13.27□□□□□ -0.29
CLN6-220ENST00000637450 TMBIM6P55061 237 aa13.27□□□□□ -0.29
CLN6-220ENST00000637450 ZNF90Q03938 601 aa13.27□□□□□ -0.29
CLN6-220ENST00000637450 ZNF767PQ75MW2 155 aa13.27□□□□□ -0.29
CLN6-220ENST00000637450 BCL7BQ9BQE9 202 aa13.27□□□□□ -0.29
CLN6-220ENST00000637450 PBDC1Q9BVG4 233 aa13.27□□□□□ -0.29
CLN6-220ENST00000637450 PFDN2Q9UHV9 154 aa13.27□□□□□ -0.29
CLN6-220ENST00000637450 ZFP92A6NM28 416 aa13.26□□□□□ -0.29
CLN6-220ENST00000637450 ANXA3P12429 323 aa13.26□□□□□ -0.29
CLN6-220ENST00000637450 SRPXP78539 464 aa13.26□□□□□ -0.29
CLN6-220ENST00000637450 ZNF705AQ6ZN79 300 aaPredicted RBP13.26□□□□□ -0.29
CLN6-220ENST00000637450 NEU1Q99519 415 aa13.26□□□□□ -0.29
CLN6-220ENST00000637450 AMBPP02760 352 aa13.25□□□□□ -0.29
CLN6-220ENST00000637450 TNFSF8P32971 234 aa13.25□□□□□ -0.29
CLN6-220ENST00000637450 DEFB1P60022 68 aa13.25□□□□□ -0.29
CLN6-220ENST00000637450 C1orf194Q5T5A4 169 aa13.25□□□□□ -0.29
CLN6-220ENST00000637450 GDF5OSQ5U4N7 250 aa13.25□□□□□ -0.29
CLN6-220ENST00000637450 OR1S1Q8NH92 325 aa13.25□□□□□ -0.29
CLN6-220ENST00000637450 SLC35E1Q96K37 410 aa13.25□□□□□ -0.29
CLN6-220ENST00000637450 WDR12Q9GZL7 423 aaKnown RBP13.25□□□□□ -0.29
CLN6-220ENST00000637450 SLIRPQ9GZT3 109 aaKnown RBP13.25□□□□□ -0.29
CLN6-220ENST00000637450 FABP12A6NFH5 140 aa13.24□□□□□ -0.29
CLN6-220ENST00000637450 ZNF705FA8MVS1 300 aaPredicted RBP13.24□□□□□ -0.29
CLN6-220ENST00000637450 PITX3O75364 302 aa13.24□□□□□ -0.29
CLN6-220ENST00000637450 ZNF705DP0CH99 300 aaPredicted RBP13.24□□□□□ -0.29
CLN6-220ENST00000637450 ZNF705BP0CI00 300 aaPredicted RBP13.24□□□□□ -0.29
CLN6-220ENST00000637450 ID1P41134 155 aa13.24□□□□□ -0.29
CLN6-220ENST00000637450 LINC00052Q96N35 136 aa13.24□□□□□ -0.29
CLN6-220ENST00000637450 CLUHP3Q96NS8 147 aa13.24□□□□□ -0.29
CLN6-220ENST00000637450 SAV1Q9H4B6 383 aaPredicted RBP13.24□□□□□ -0.29
CLN6-220ENST00000637450 PIGBOS1A0A0B4J2F0 54 aa13.23□□□□□ -0.29
CLN6-220ENST00000637450 DUXBA0A1W2PPF3 345 aa13.23□□□□□ -0.29
CLN6-220ENST00000637450 SMIM9A6NGZ8 99 aa13.23□□□□□ -0.29
CLN6-220ENST00000637450 SNRPGP15A8MWD9 76 aa13.23□□□□□ -0.29
CLN6-220ENST00000637450 SOCS3O14543 225 aa13.23□□□□□ -0.29
CLN6-220ENST00000637450 FABP1P07148 127 aa13.23□□□□□ -0.29
CLN6-220ENST00000637450 PSMB3P49720 205 aa13.23□□□□□ -0.29
CLN6-220ENST00000637450 FOXI2Q6ZQN5 318 aa13.23□□□□□ -0.29
CLN6-220ENST00000637450 TRGV9Q99603 122 aa13.23□□□□□ -0.29
CLN6-220ENST00000637450 SCRT1Q9BWW7 348 aa13.23□□□□□ -0.29
CLN6-220ENST00000637450 TMEM189A5PLL7 270 aa13.22□□□□□ -0.29
CLN6-220ENST00000637450 IGKV3-20P01619 116 aa13.22□□□□□ -0.29
CLN6-220ENST00000637450 FXYD7P58549 80 aa13.22□□□□□ -0.29
CLN6-220ENST00000637450 LYZP61626 148 aa13.22□□□□□ -0.29
CLN6-220ENST00000637450 TMEM128Q5BJH2 165 aa13.22□□□□□ -0.29
CLN6-220ENST00000637450 NDUFAF3Q9BU61 184 aa13.22□□□□□ -0.29
CLN6-220ENST00000637450 PCLOQ9Y6V0 5065 aa13.22□□□□□ -0.29
CLN6-220ENST00000637450 SPART-AS1P0CW21 52 aa13.21□□□□□ -0.29
CLN6-220ENST00000637450 P0DMU3 169 aa13.21□□□□□ -0.29
CLN6-220ENST00000637450 FAM231AP0DMU4 169 aa13.21□□□□□ -0.29
CLN6-220ENST00000637450 FAM231CP0DMU5 169 aa13.21□□□□□ -0.29
CLN6-220ENST00000637450 RAB11AP62491 216 aa13.21□□□□□ -0.29
CLN6-220ENST00000637450 OR2F1Q13607 317 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms