RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 CITED4Q96RK1 184 aa11.97□□□□□ -0.49
CLN6-219ENST00000637329 FUT9Q9Y231 359 aa11.97□□□□□ -0.49
CLN6-219ENST00000637329 ATRQ13535 2644 aa11.97□□□□□ -0.49
CLN6-219ENST00000637329 IFNA1P01562 189 aa11.96□□□□□ -0.49
CLN6-219ENST00000637329 IGHG4P01861 327 aa11.96□□□□□ -0.49
CLN6-219ENST00000637329 TRGV3P03979 118 aa11.96□□□□□ -0.49
CLN6-219ENST00000637329 STAG3L2P0CL84 134 aa11.96□□□□□ -0.49
CLN6-219ENST00000637329 STAG3L3P0CL85 134 aa11.96□□□□□ -0.49
CLN6-219ENST00000637329 TAGLN2P37802 199 aaKnown RBP11.96□□□□□ -0.49
CLN6-219ENST00000637329 TAS2R45P59539 299 aa11.96□□□□□ -0.49
CLN6-219ENST00000637329 Q6ZS46 218 aa11.96□□□□□ -0.49
CLN6-219ENST00000637329 ZNF418Q8TF45 676 aaPredicted RBP11.96□□□□□ -0.49
CLN6-219ENST00000637329 NOL4LQ96MY1 436 aaPredicted RBP11.96□□□□□ -0.49
CLN6-219ENST00000637329 SMDT1Q9H4I9 107 aa11.96□□□□□ -0.49
CLN6-219ENST00000637329 LINC00527Q9UJ94 153 aa11.96□□□□□ -0.49
CLN6-219ENST00000637329 CXorf1O96002 111 aa11.95□□□□□ -0.5
CLN6-219ENST00000637329 RD3LP0DJH9 198 aa11.95□□□□□ -0.5
CLN6-219ENST00000637329 GATA2P23769 480 aaPredicted RBP11.95□□□□□ -0.5
CLN6-219ENST00000637329 PSMB3P49720 205 aa11.95□□□□□ -0.5
CLN6-219ENST00000637329 TPPP2P59282 170 aa11.95□□□□□ -0.5
CLN6-219ENST00000637329 SLC35B1P78383 322 aa11.95□□□□□ -0.5
CLN6-219ENST00000637329 ATP5G2Q06055 141 aa11.95□□□□□ -0.5
CLN6-219ENST00000637329 TIGITQ495A1 244 aa11.95□□□□□ -0.5
CLN6-219ENST00000637329 KHDC3LQ587J8 217 aa11.95□□□□□ -0.5
CLN6-219ENST00000637329 C10orf113Q5VZT2 155 aa11.95□□□□□ -0.5
CLN6-219ENST00000637329 S100A7AQ86SG5 101 aa11.95□□□□□ -0.5
CLN6-219ENST00000637329 OR51G1Q8NGK1 321 aa11.95□□□□□ -0.5
CLN6-219ENST00000637329 TMEM158Q8WZ71 300 aa11.95□□□□□ -0.5
CLN6-219ENST00000637329 DNAJC4Q9NNZ3 241 aa11.95□□□□□ -0.5
CLN6-219ENST00000637329 MANBALQ9NQG1 85 aa11.95□□□□□ -0.5
CLN6-219ENST00000637329 HIVEP2P31629 2446 aa11.95□□□□□ -0.5
CLN6-219ENST00000637329 A0A0G2JLM5 398 aa11.94□□□□□ -0.5
CLN6-219ENST00000637329 NUPL2O15504 423 aaKnown RBP11.94□□□□□ -0.5
CLN6-219ENST00000637329 OR2C1O95371 312 aa11.94□□□□□ -0.5
CLN6-219ENST00000637329 RNASE1P07998 156 aaKnown RBP11.94□□□□□ -0.5
CLN6-219ENST00000637329 PSG1P11464 419 aa11.94□□□□□ -0.5
CLN6-219ENST00000637329 FAM78BQ5VT40 261 aa11.94□□□□□ -0.5
CLN6-219ENST00000637329 TMEM37Q8WXS4 190 aa11.94□□□□□ -0.5
CLN6-219ENST00000637329 CCDC140Q96MF4 163 aa11.94□□□□□ -0.5
CLN6-219ENST00000637329 JMJD8Q96S16 334 aa11.94□□□□□ -0.5
CLN6-219ENST00000637329 SEPSECSQ9HD40 501 aaKnown RBP11.94□□□□□ -0.5
CLN6-219ENST00000637329 TECRQ9NZ01 308 aaKnown RBP11.94□□□□□ -0.5
CLN6-219ENST00000637329 A0A1B0GV50 99 aa11.93□□□□□ -0.5
CLN6-219ENST00000637329 KRBOX1C9JBD0 128 aa11.93□□□□□ -0.5
CLN6-219ENST00000637329 INAFM1C9JVW0 142 aa11.93□□□□□ -0.5
CLN6-219ENST00000637329 NDUFS6O75380 124 aaKnown RBP11.93□□□□□ -0.5
CLN6-219ENST00000637329 HYPMO75409 117 aa11.93□□□□□ -0.5
CLN6-219ENST00000637329 CD5P06127 495 aa11.93□□□□□ -0.5
CLN6-219ENST00000637329 PSMB8P28062 276 aa11.93□□□□□ -0.5
CLN6-219ENST00000637329 HILS1P60008 231 aa11.93□□□□□ -0.5
CLN6-219ENST00000637329 DEFA5Q01523 94 aa11.93□□□□□ -0.5
CLN6-219ENST00000637329 PEA15Q15121 130 aa11.93□□□□□ -0.5
CLN6-219ENST00000637329 GUK1Q16774 197 aa11.93□□□□□ -0.5
CLN6-219ENST00000637329 TMEM95Q3KNT9 176 aa11.93□□□□□ -0.5
CLN6-219ENST00000637329 TOR2AQ5JU69 321 aa11.93□□□□□ -0.5
CLN6-219ENST00000637329 PQLC2Q6ZP29 291 aa11.93□□□□□ -0.5
CLN6-219ENST00000637329 MS4A10Q96PG2 267 aa11.93□□□□□ -0.5
CLN6-219ENST00000637329 ARL2-SNX15V9GYD0 113 aa11.93□□□□□ -0.5
CLN6-219ENST00000637329 TLN2Q9Y4G6 2542 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 WI2-2373I1.2A0A1W2PRP0 233 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 RBFOX3A6NFN3 312 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 OR2T8A6NH00 312 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 I3L521 148 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 TGOLN2O43493 480 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 ELANEP08246 267 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 CTSGP08311 255 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 ARL14EPLP0DKL9 152 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 C8orf88P0DMB2 117 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 BCL2P10415 239 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 PF4V1P10720 104 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 ZP3P21754 424 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 GPR183P32249 361 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 FGF8P55075 233 aaPredicted RBP11.92□□□□□ -0.5
CLN6-219ENST00000637329 CCL20P78556 96 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 RELQ04864 619 aaPredicted RBP11.92□□□□□ -0.5
CLN6-219ENST00000637329 FOXE3Q13461 319 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 ZNF506Q5JVG8 444 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 ZNF600Q6ZNG1 722 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 STXBP6Q8NFX7 210 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 OR1B1Q8NGR6 318 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 Q8WTZ3 238 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 RNF125Q96EQ8 232 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 SCRT1Q9BWW7 348 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 EIF5A2Q9GZV4 153 aaKnown RBP11.92□□□□□ -0.5
CLN6-219ENST00000637329 ESM1Q9NQ30 184 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 GNG13Q9P2W3 67 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 RNF24Q9Y225 148 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 HIGD1AQ9Y241 93 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 S4R3C0 116 aa11.92□□□□□ -0.5
CLN6-219ENST00000637329 ANK3Q12955 4377 aaKnown RBP11.92□□□□□ -0.5
CLN6-219ENST00000637329 LOC102723971A0A1B0GUV8 181 aa11.91□□□□□ -0.5
CLN6-219ENST00000637329 S100A7P31151 101 aa11.91□□□□□ -0.5
CLN6-219ENST00000637329 ADMP35318 185 aa11.91□□□□□ -0.5
CLN6-219ENST00000637329 LYZP61626 148 aa11.91□□□□□ -0.5
CLN6-219ENST00000637329 SPATA31B1PQ5VZV4 182 aa11.91□□□□□ -0.5
CLN6-219ENST00000637329 TEX38Q6PEX7 206 aa11.91□□□□□ -0.5
CLN6-219ENST00000637329 PATE2Q6UY27 113 aa11.91□□□□□ -0.5
CLN6-219ENST00000637329 MIR17HGQ75NE6 70 aa11.91□□□□□ -0.5
CLN6-219ENST00000637329 LINC00305Q7Z4B0 112 aa11.91□□□□□ -0.5
CLN6-219ENST00000637329 RNF152Q8N8N0 203 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms