RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 BLNKQ8WV28 456 aa11.93□□□□□ -0.5
CACNA1A-220ENST00000635988 MRPL20Q9BYC9 149 aaKnown RBP11.93□□□□□ -0.5
CACNA1A-220ENST00000635988 PEF1Q9UBV8 284 aaKnown RBP11.93□□□□□ -0.5
CACNA1A-220ENST00000635988 LINC00312Q9Y6C7 94 aa11.93□□□□□ -0.5
CACNA1A-220ENST00000635988 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.93□□□□□ -0.5
CACNA1A-220ENST00000635988 PSG1P11464 419 aa11.93□□□□□ -0.5
CACNA1A-220ENST00000635988 DUX4L9Q6RFH8 374 aaPredicted RBP11.93□□□□□ -0.5
CACNA1A-220ENST00000635988 OR4C13Q8NGP0 309 aa11.93□□□□□ -0.5
CACNA1A-220ENST00000635988 IGLV3-9A0A075B6K5 115 aa11.92□□□□□ -0.5
CACNA1A-220ENST00000635988 HAX1O00165 279 aa11.92□□□□□ -0.5
CACNA1A-220ENST00000635988 AMMECR1LQ6DCA0 310 aa11.92□□□□□ -0.5
CACNA1A-220ENST00000635988 CFAP161Q6P656 301 aa11.92□□□□□ -0.5
CACNA1A-220ENST00000635988 LINC00322Q6ZN03 302 aaPredicted RBP11.92□□□□□ -0.5
CACNA1A-220ENST00000635988 OR10X1Q8NGY0 326 aa11.92□□□□□ -0.5
CACNA1A-220ENST00000635988 CCL13Q99616 98 aa11.92□□□□□ -0.5
CACNA1A-220ENST00000635988 DSCAML1Q8TD84 2053 aa11.92□□□□□ -0.5
CACNA1A-220ENST00000635988 CBY3A6NI87 242 aa11.92□□□□□ -0.5
CACNA1A-220ENST00000635988 NPIPB6E9PJ23 425 aa11.92□□□□□ -0.5
CACNA1A-220ENST00000635988 K7ERU9 68 aa11.92□□□□□ -0.5
CACNA1A-220ENST00000635988 TCRAP04437 139 aa11.92□□□□□ -0.5
CACNA1A-220ENST00000635988 FAM71F2Q6NXP2 309 aa11.92□□□□□ -0.5
CACNA1A-220ENST00000635988 RPH3ALQ9UNE2 315 aa11.92□□□□□ -0.5
CACNA1A-220ENST00000635988 TNCP24821 2201 aa11.92□□□□□ -0.5
CACNA1A-220ENST00000635988 PLAUP00749 431 aa11.91□□□□□ -0.5
CACNA1A-220ENST00000635988 ORM2P19652 201 aa11.91□□□□□ -0.5
CACNA1A-220ENST00000635988 GPR183P32249 361 aa11.91□□□□□ -0.5
CACNA1A-220ENST00000635988 LINC01545Q5VT33 79 aa11.91□□□□□ -0.5
CACNA1A-220ENST00000635988 DEFB108BQ8NET1 73 aa11.91□□□□□ -0.5
CACNA1A-220ENST00000635988 ZNF835Q9Y2P0 537 aa11.91□□□□□ -0.5
CACNA1A-220ENST00000635988 CHTOPQ9Y3Y2 248 aaKnown RBP11.91□□□□□ -0.5
CACNA1A-220ENST00000635988 TANC2Q9HCD6 1990 aa11.91□□□□□ -0.5
CACNA1A-220ENST00000635988 E7EUB6 86 aa11.91□□□□□ -0.5
CACNA1A-220ENST00000635988 M0R1B8 84 aa11.91□□□□□ -0.5
CACNA1A-220ENST00000635988 M0R296 226 aa11.91□□□□□ -0.5
CACNA1A-220ENST00000635988 TNFAIP6P98066 277 aaPredicted RBP11.91□□□□□ -0.5
CACNA1A-220ENST00000635988 PSG9Q00887 426 aa11.91□□□□□ -0.5
CACNA1A-220ENST00000635988 C3orf36Q3SXR2 165 aa11.91□□□□□ -0.5
CACNA1A-220ENST00000635988 ATP1A1-AS1Q5TC04 95 aa11.91□□□□□ -0.5
CACNA1A-220ENST00000635988 C1orf210Q8IVY1 113 aa11.91□□□□□ -0.5
CACNA1A-220ENST00000635988 FAM216BQ8N7L0 139 aa11.91□□□□□ -0.5
CACNA1A-220ENST00000635988 OR1B1Q8NGR6 318 aa11.91□□□□□ -0.5
CACNA1A-220ENST00000635988 TMEM190Q8WZ59 177 aa11.91□□□□□ -0.5
CACNA1A-220ENST00000635988 SGK494Q96LW2 274 aa11.91□□□□□ -0.5
CACNA1A-220ENST00000635988 TRGV9Q99603 122 aa11.91□□□□□ -0.5
CACNA1A-220ENST00000635988 COX8AP10176 69 aa11.9□□□□□ -0.5
CACNA1A-220ENST00000635988 SEC11AP67812 179 aa11.9□□□□□ -0.5
CACNA1A-220ENST00000635988 MEF2CQ06413 473 aaPredicted RBP11.9□□□□□ -0.5
CACNA1A-220ENST00000635988 ZNRD1Q9P1U0 126 aa11.9□□□□□ -0.5
CACNA1A-220ENST00000635988 TP73-AS1Q9UF72 201 aa11.9□□□□□ -0.5
CACNA1A-220ENST00000635988 RNF24Q9Y225 148 aa11.9□□□□□ -0.5
CACNA1A-220ENST00000635988 CGB1A6NKQ9 187 aa11.9□□□□□ -0.5
CACNA1A-220ENST00000635988 COL8A1P27658 744 aa11.9□□□□□ -0.5
CACNA1A-220ENST00000635988 ZNF137PP52743 207 aa11.9□□□□□ -0.5
CACNA1A-220ENST00000635988 LPAL2Q16609 132 aa11.9□□□□□ -0.5
CACNA1A-220ENST00000635988 TIMM23BQ5SRD1 257 aa11.9□□□□□ -0.5
CACNA1A-220ENST00000635988 ERASQ7Z444 233 aa11.9□□□□□ -0.5
CACNA1A-220ENST00000635988 FREM2Q5SZK8 3169 aa11.89□□□□□ -0.51
CACNA1A-220ENST00000635988 HTR1DP28221 377 aa11.89□□□□□ -0.51
CACNA1A-220ENST00000635988 VHLLQ6RSH7 139 aa11.89□□□□□ -0.51
CACNA1A-220ENST00000635988 Q9H3A6 140 aa11.89□□□□□ -0.51
CACNA1A-220ENST00000635988 DSCAMO60469 2012 aa11.89□□□□□ -0.51
CACNA1A-220ENST00000635988 GAGE12BA1L429 117 aa11.89□□□□□ -0.51
CACNA1A-220ENST00000635988 CRYGCP07315 174 aa11.89□□□□□ -0.51
CACNA1A-220ENST00000635988 GP9P14770 177 aa11.89□□□□□ -0.51
CACNA1A-220ENST00000635988 CD24P25063 80 aa11.89□□□□□ -0.51
CACNA1A-220ENST00000635988 CSN1S1P47710 185 aa11.89□□□□□ -0.51
CACNA1A-220ENST00000635988 TEX36Q5VZQ5 186 aa11.89□□□□□ -0.51
CACNA1A-220ENST00000635988 BPIFA4PQ86YQ2 179 aa11.89□□□□□ -0.51
CACNA1A-220ENST00000635988 DPF1Q92782 380 aa11.89□□□□□ -0.51
CACNA1A-220ENST00000635988 MRPL36Q9P0J6 103 aaKnown RBP11.89□□□□□ -0.51
CACNA1A-220ENST00000635988 HEATR1Q9H583 2144 aaKnown RBP11.88□□□□□ -0.51
CACNA1A-220ENST00000635988 IGHV3-48P01763 117 aa11.88□□□□□ -0.51
CACNA1A-220ENST00000635988 ARF6P62330 175 aa11.88□□□□□ -0.51
CACNA1A-220ENST00000635988 VMA21Q3ZAQ7 101 aa11.88□□□□□ -0.51
CACNA1A-220ENST00000635988 NEU4Q8WWR8 484 aaPredicted RBP11.88□□□□□ -0.51
CACNA1A-220ENST00000635988 TMUB1Q9BVT8 246 aa11.88□□□□□ -0.51
CACNA1A-220ENST00000635988 OTORQ9NRC9 128 aa11.88□□□□□ -0.51
CACNA1A-220ENST00000635988 AP5S1Q9NUS5 200 aa11.88□□□□□ -0.51
CACNA1A-220ENST00000635988 FRYLO94915 3013 aa11.88□□□□□ -0.51
CACNA1A-220ENST00000635988 A0A087X0K7 114 aa11.88□□□□□ -0.51
CACNA1A-220ENST00000635988 A0A1B0GW15 77 aa11.88□□□□□ -0.51
CACNA1A-220ENST00000635988 IGHV1-46P01743 117 aa11.88□□□□□ -0.51
CACNA1A-220ENST00000635988 APOHP02749 345 aaPredicted RBP11.88□□□□□ -0.51
CACNA1A-220ENST00000635988 PLP1P60201 277 aa11.88□□□□□ -0.51
CACNA1A-220ENST00000635988 C10orf55Q5SWW7 151 aa11.88□□□□□ -0.51
CACNA1A-220ENST00000635988 Q86TA4 180 aa11.88□□□□□ -0.51
CACNA1A-220ENST00000635988 TMEM186Q96B77 213 aa11.88□□□□□ -0.51
CACNA1A-220ENST00000635988 RIGQ13278 110 aa11.87□□□□□ -0.51
CACNA1A-220ENST00000635988 PVRIGQ6DKI7 326 aa11.87□□□□□ -0.51
CACNA1A-220ENST00000635988 C8orf46Q8TAG6 207 aa11.87□□□□□ -0.51
CACNA1A-220ENST00000635988 TRBV6-1A0A0K0K1D8 114 aa11.87□□□□□ -0.51
CACNA1A-220ENST00000635988 A0A1B0GUT8 65 aa11.87□□□□□ -0.51
CACNA1A-220ENST00000635988 C7orf71A4D174 169 aa11.87□□□□□ -0.51
CACNA1A-220ENST00000635988 C22orf46C9J442 243 aa11.87□□□□□ -0.51
CACNA1A-220ENST00000635988 PRR31Q5SQ13 230 aa11.87□□□□□ -0.51
CACNA1A-220ENST00000635988 GATD1Q8NB37 220 aa11.87□□□□□ -0.51
CACNA1A-220ENST00000635988 TMEM116Q8NCL8 245 aa11.87□□□□□ -0.51
CACNA1A-220ENST00000635988 ZNF747Q9BV97 191 aa11.87□□□□□ -0.51
CACNA1A-220ENST00000635988 CACNA1GO43497 2377 aa11.86□□□□□ -0.51
CACNA1A-220ENST00000635988 TRAV17A0A0B4J275 112 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms