RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 WNK2Q9Y3S1 2297 aa12.46□□□□□ -0.41
CLN8-209ENST00000635970 NKX6-3A6NJ46 265 aa12.46□□□□□ -0.41
CLN8-209ENST00000635970 HNF1AP20823 631 aa12.46□□□□□ -0.41
CLN8-209ENST00000635970 PRDX2P32119 198 aa12.46□□□□□ -0.41
CLN8-209ENST00000635970 CTRLP40313 264 aa12.46□□□□□ -0.41
CLN8-209ENST00000635970 ARSJQ5FYB0 599 aaPredicted RBP12.46□□□□□ -0.41
CLN8-209ENST00000635970 OR8I2Q8N0Y5 310 aa12.46□□□□□ -0.41
CLN8-209ENST00000635970 ZNRF1Q8ND25 227 aa12.46□□□□□ -0.41
CLN8-209ENST00000635970 OR4P4Q8NGL7 312 aa12.46□□□□□ -0.41
CLN8-209ENST00000635970 TMEM186Q96B77 213 aa12.46□□□□□ -0.41
CLN8-209ENST00000635970 GNB4Q9HAV0 340 aa12.46□□□□□ -0.41
CLN8-209ENST00000635970 TECRQ9NZ01 308 aaKnown RBP12.46□□□□□ -0.41
CLN8-209ENST00000635970 MGST3O14880 152 aa12.45□□□□□ -0.42
CLN8-209ENST00000635970 FOXH1O75593 365 aa12.45□□□□□ -0.42
CLN8-209ENST00000635970 LINC00205P59089 165 aa12.45□□□□□ -0.42
CLN8-209ENST00000635970 TAS2R45P59539 299 aa12.45□□□□□ -0.42
CLN8-209ENST00000635970 SSMEM1Q8WWF3 244 aa12.45□□□□□ -0.42
CLN8-209ENST00000635970 DDB2Q92466 427 aa12.45□□□□□ -0.42
CLN8-209ENST00000635970 ADTRPQ96IZ2 230 aa12.45□□□□□ -0.42
CLN8-209ENST00000635970 TMEM14BQ9NUH8 114 aa12.45□□□□□ -0.42
CLN8-209ENST00000635970 C22orf46C9J442 243 aa12.45□□□□□ -0.42
CLN8-209ENST00000635970 INAFM1C9JVW0 142 aa12.45□□□□□ -0.42
CLN8-209ENST00000635970 AMY1AP04745 511 aa12.45□□□□□ -0.42
CLN8-209ENST00000635970 CENPWQ5EE01 88 aa12.45□□□□□ -0.42
CLN8-209ENST00000635970 TMEM136Q6ZRR5 245 aa12.45□□□□□ -0.42
CLN8-209ENST00000635970 NRN1Q9NPD7 142 aa12.45□□□□□ -0.42
CLN8-209ENST00000635970 MRPL27Q9P0M9 148 aaKnown RBP12.45□□□□□ -0.42
CLN8-209ENST00000635970 FBXL7Q9UJT9 491 aa12.45□□□□□ -0.42
CLN8-209ENST00000635970 TBL2Q9Y4P3 447 aaKnown RBP12.45□□□□□ -0.42
CLN8-209ENST00000635970 CD33P20138 364 aa12.44□□□□□ -0.42
CLN8-209ENST00000635970 PRRX1P54821 245 aa12.44□□□□□ -0.42
CLN8-209ENST00000635970 POU2AF1Q16633 256 aa12.44□□□□□ -0.42
CLN8-209ENST00000635970 COMMD5Q9GZQ3 224 aa12.44□□□□□ -0.42
CLN8-209ENST00000635970 A0A1W2PRE2 83 aa12.43□□□□□ -0.42
CLN8-209ENST00000635970 SMIM27A0A1W2PRY6 76 aa12.43□□□□□ -0.42
CLN8-209ENST00000635970 ZNF324O75467 553 aaPredicted RBP12.43□□□□□ -0.42
CLN8-209ENST00000635970 AMTP48728 403 aa12.43□□□□□ -0.42
CLN8-209ENST00000635970 KRTDAPP60985 99 aa12.43□□□□□ -0.42
CLN8-209ENST00000635970 IL17RELQ6ZVW7 336 aa12.43□□□□□ -0.42
CLN8-209ENST00000635970 Q8N976 141 aa12.43□□□□□ -0.42
CLN8-209ENST00000635970 IFI27L2Q9H2X8 130 aa12.43□□□□□ -0.42
CLN8-209ENST00000635970 ZNF257Q9Y2Q1 563 aa12.43□□□□□ -0.42
CLN8-209ENST00000635970 HIVEP2P31629 2446 aa12.43□□□□□ -0.42
CLN8-209ENST00000635970 FN1P02751 2386 aaKnown RBP12.43□□□□□ -0.42
CLN8-209ENST00000635970 C20orf202A1L168 122 aa12.43□□□□□ -0.42
CLN8-209ENST00000635970 NDUFB3O43676 98 aa12.43□□□□□ -0.42
CLN8-209ENST00000635970 NPSP0C0P6 89 aa12.43□□□□□ -0.42
CLN8-209ENST00000635970 LINC00869P0C866 280 aa12.43□□□□□ -0.42
CLN8-209ENST00000635970 LOXL3P58215 753 aa12.43□□□□□ -0.42
CLN8-209ENST00000635970 PAX2Q02962 417 aa12.43□□□□□ -0.42
CLN8-209ENST00000635970 PSG5Q15238 335 aa12.43□□□□□ -0.42
CLN8-209ENST00000635970 PMCHL1Q16048 86 aa12.43□□□□□ -0.42
CLN8-209ENST00000635970 SPATA45Q537H7 98 aa12.43□□□□□ -0.42
CLN8-209ENST00000635970 TPRX1Q8N7U7 411 aa12.43□□□□□ -0.42
CLN8-209ENST00000635970 WIPF2Q8TF74 440 aaPredicted RBP12.43□□□□□ -0.42
CLN8-209ENST00000635970 PRNDQ9UKY0 176 aa12.43□□□□□ -0.42
CLN8-209ENST00000635970 A0A1W2PS18 150 aa12.42□□□□□ -0.42
CLN8-209ENST00000635970 OR5I1Q13606 314 aa12.42□□□□□ -0.42
CLN8-209ENST00000635970 LRRC10Q5BKY1 277 aa12.42□□□□□ -0.42
CLN8-209ENST00000635970 SPATA31B1PQ5VZV4 182 aa12.42□□□□□ -0.42
CLN8-209ENST00000635970 DSCAML1Q8TD84 2053 aa12.42□□□□□ -0.42
CLN8-209ENST00000635970 LOC105371242A0A075B767 164 aa12.41□□□□□ -0.42
CLN8-209ENST00000635970 TRAV3A0A0B4J244 114 aa12.41□□□□□ -0.42
CLN8-209ENST00000635970 IZUMO1RA6ND01 250 aa12.41□□□□□ -0.42
CLN8-209ENST00000635970 CRYBB3P26998 211 aa12.41□□□□□ -0.42
CLN8-209ENST00000635970 VKORC1L1Q8N0U8 176 aa12.41□□□□□ -0.42
CLN8-209ENST00000635970 H1FXQ92522 213 aaKnown RBP12.41□□□□□ -0.42
CLN8-209ENST00000635970 BORCS7Q96B45 105 aa12.41□□□□□ -0.42
CLN8-209ENST00000635970 NABP2Q9BQ15 211 aa12.41□□□□□ -0.42
CLN8-209ENST00000635970 CHRDL1Q9BU40 450 aa12.41□□□□□ -0.42
CLN8-209ENST00000635970 NIPBLQ6KC79 2804 aaeCLIP12.41□□□□□ -0.42
CLN8-209ENST00000635970 IGHV2-70DA0A0C4DH43 119 aa12.41□□□□□ -0.42
CLN8-209ENST00000635970 CA2P00918 260 aa12.41□□□□□ -0.42
CLN8-209ENST00000635970 AVPP01185 164 aa12.41□□□□□ -0.42
CLN8-209ENST00000635970 IGLC2P0DOY2 106 aa12.41□□□□□ -0.42
CLN8-209ENST00000635970 IGLC3P0DOY3 106 aa12.41□□□□□ -0.42
CLN8-209ENST00000635970 EDDM3AQ14507 147 aa12.41□□□□□ -0.42
CLN8-209ENST00000635970 RPL39P5Q59GN2 51 aa12.41□□□□□ -0.42
CLN8-209ENST00000635970 IBA57Q5T440 356 aaKnown RBP12.41□□□□□ -0.42
CLN8-209ENST00000635970 OR4A47Q6IF82 309 aa12.41□□□□□ -0.42
CLN8-209ENST00000635970 MIR17HGQ75NE6 70 aa12.41□□□□□ -0.42
CLN8-209ENST00000635970 OR5B3Q8NH48 314 aa12.41□□□□□ -0.42
CLN8-209ENST00000635970 MRPL32Q9BYC8 188 aaKnown RBP12.41□□□□□ -0.42
CLN8-209ENST00000635970 PLEKHA3Q9HB20 300 aa12.41□□□□□ -0.42
CLN8-209ENST00000635970 INSIG2Q9Y5U4 225 aa12.41□□□□□ -0.42
CLN8-209ENST00000635970 F2Z2F3 143 aa12.4□□□□□ -0.42
CLN8-209ENST00000635970 TMEM30BQ3MIR4 351 aa12.4□□□□□ -0.42
CLN8-209ENST00000635970 FAM120AOSQ5T036 256 aa12.4□□□□□ -0.42
CLN8-209ENST00000635970 C1orf229Q6ZS94 237 aaPredicted RBP12.4□□□□□ -0.42
CLN8-209ENST00000635970 ORAOV1Q8WV07 137 aa12.4□□□□□ -0.42
CLN8-209ENST00000635970 FAM103A1Q9BTL3 118 aaKnown RBP12.4□□□□□ -0.42
CLN8-209ENST00000635970 ZNF331Q9NQX6 463 aaPredicted RBP12.4□□□□□ -0.42
CLN8-209ENST00000635970 SLC35D1Q9NTN3 355 aa12.4□□□□□ -0.42
CLN8-209ENST00000635970 RPUSD1Q9UJJ7 312 aaKnown RBP12.4□□□□□ -0.42
CLN8-209ENST00000635970 MRPS16Q9Y3D3 137 aaKnown RBP12.4□□□□□ -0.42
CLN8-209ENST00000635970 APCSP02743 223 aa12.39□□□□□ -0.43
CLN8-209ENST00000635970 LTC4SQ16873 150 aa12.39□□□□□ -0.43
CLN8-209ENST00000635970 FAM231DQ6ZW35 169 aa12.39□□□□□ -0.43
CLN8-209ENST00000635970 DCTN5Q9BTE1 182 aa12.39□□□□□ -0.43
CLN8-209ENST00000635970 CDC42EP3Q9UKI2 254 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms