RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 YPEL4Q96NS1 127 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 HSPB8Q9UJY1 196 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 MOB4Q9Y3A3 225 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 LINC01549A6NIU2 74 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 FAM223BA6NKX1 122 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 IGLV2-23P01705 113 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 PSG1P11464 419 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 NPPCP23582 126 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 FAM223AQ8IWN6 122 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 FAM168AQ92567 244 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 SLC25A39Q9BZJ4 359 aaPredicted RBP3.66□□□□□ -1.82
SCN1A-210ENST00000635776 TMEM75Q8N9X5 138 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 NAGKQ9UJ70 344 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 FBXL7Q9UJT9 491 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 TRBV7-1A0A0A6YYK4 115 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 TMEM189A5PLL7 270 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 MRPL54Q6P161 138 aaKnown RBP3.66□□□□□ -1.82
SCN1A-210ENST00000635776 ZNF329Q86UD4 541 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 IGHV2-70DA0A0C4DH43 119 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 FCGR2BP31994 310 aaPredicted RBP3.66□□□□□ -1.82
SCN1A-210ENST00000635776 DUX4L9Q6RFH8 374 aaPredicted RBP3.66□□□□□ -1.82
SCN1A-210ENST00000635776 M0R143 59 aa3.65□□□□□ -1.82
SCN1A-210ENST00000635776 PPBPP02775 128 aa3.65□□□□□ -1.82
SCN1A-210ENST00000635776 ID1P41134 155 aa3.65□□□□□ -1.82
SCN1A-210ENST00000635776 OR5I1Q13606 314 aa3.65□□□□□ -1.82
SCN1A-210ENST00000635776 TMEM78Q5T7P6 136 aa3.65□□□□□ -1.82
SCN1A-210ENST00000635776 CHCHD1Q96BP2 118 aaKnown RBP3.65□□□□□ -1.82
SCN1A-210ENST00000635776 IGLC1P0CG04 106 aa3.65□□□□□ -1.82
SCN1A-210ENST00000635776 DDTP30046 118 aa3.65□□□□□ -1.82
SCN1A-210ENST00000635776 SPATA31B1PQ5VZV4 182 aa3.65□□□□□ -1.82
SCN1A-210ENST00000635776 ASCL2Q99929 193 aa3.65□□□□□ -1.82
SCN1A-210ENST00000635776 GNB4Q9HAV0 340 aa3.65□□□□□ -1.82
SCN1A-210ENST00000635776 KLF12Q9Y4X4 402 aa3.65□□□□□ -1.82
SCN1A-210ENST00000635776 KMT2EQ8IZD2 1858 aa3.65□□□□□ -1.82
SCN1A-210ENST00000635776 A0A1B0GUT8 65 aa3.65□□□□□ -1.82
SCN1A-210ENST00000635776 LINC00205P59089 165 aa3.65□□□□□ -1.82
SCN1A-210ENST00000635776 SLC35B1P78383 322 aa3.65□□□□□ -1.82
SCN1A-210ENST00000635776 USMG5Q96IX5 58 aa3.65□□□□□ -1.82
SCN1A-210ENST00000635776 NOTCH3Q9UM47 2321 aa3.65□□□□□ -1.82
SCN1A-210ENST00000635776 A6NNC1 897 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 KCNS1Q96KK3 526 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 DCAF16Q9NXF7 216 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 PPP1R17O96001 155 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 EBI3Q14213 229 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 FAM53AQ6NSI3 398 aaPredicted RBP3.65□□□□□ -1.83
SCN1A-210ENST00000635776 NHLRC2Q8NBF2 726 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 CCL19Q99731 98 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 SLC25A2Q9BXI2 301 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 LAMTOR2Q9Y2Q5 125 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 V9GYV3 84 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 H3BRN7 92 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 COX6B1P14854 86 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 GATA2P23769 480 aaPredicted RBP3.65□□□□□ -1.83
SCN1A-210ENST00000635776 PRR30Q53SZ7 412 aaPredicted RBP3.65□□□□□ -1.83
SCN1A-210ENST00000635776 PPP1R14DQ9NXH3 145 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 OR2T8A6NH00 312 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 M0R2Z0 102 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 CAMPP49913 170 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 SPRNQ5BIV9 151 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 C9orf152Q5JTZ5 239 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 C10orf55Q5SWW7 151 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 ZNF841Q6ZN19 808 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 C2orf88Q9BSF0 95 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 PSG8Q9UQ74 426 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 KIAA1549Q9HCM3 1950 aa3.65□□□□□ -1.83
SCN1A-210ENST00000635776 SMIM27A0A1W2PRY6 76 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 ESDP10768 282 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 KRTDAPP60985 99 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 ADORA2A-AS1P86434 159 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 FAM106AQ4KMX7 169 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 REC114Q7Z4M0 266 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 PRSS3P2Q8NHM4 247 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 CACNA1GO43497 2377 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 NCOA6Q14686 2063 aaPredicted RBP3.64□□□□□ -1.83
SCN1A-210ENST00000635776 GGTLC3B5MD39 225 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 NPFFO15130 113 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 PYYP10082 97 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 SRIP30626 198 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 HOXA4Q00056 320 aaPredicted RBP3.64□□□□□ -1.83
SCN1A-210ENST00000635776 C9orf139Q6ZV77 190 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 GOLT1AQ6ZVE7 132 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 TCF24Q7RTU0 167 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 NUDT10Q8NFP7 164 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 NUDT11Q96G61 164 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 MAP1LC3CQ9BXW4 147 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 FNDC4Q9H6D8 234 aaPredicted RBP3.64□□□□□ -1.83
SCN1A-210ENST00000635776 EML6Q6ZMW3 1958 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 FREM1Q5H8C1 2179 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 TRAV20A0A0B4J274 112 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 ODF3BA8MYP8 253 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 B4DSR2 109 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 J3QLI3 93 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 TCL1AP56279 114 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 AURKAIP1Q9NWT8 199 aaPredicted RBP3.64□□□□□ -1.83
SCN1A-210ENST00000635776 CHD9Q3L8U1 2897 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 PTPRQQ9UMZ3 2332 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 TRBV19A0A075B6N1 114 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 IFITM10A6NMD0 228 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 NTF3P20783 257 aa3.64□□□□□ -1.83
SCN1A-210ENST00000635776 ZNF705AQ6ZN79 300 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms