RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 IGHV3-66A0A0C4DH42 116 aa11.61□□□□□ -0.55
LINC00339-209ENST00000635450 C5orf51A6NDU8 294 aa11.61□□□□□ -0.55
LINC00339-209ENST00000635450 H3BP45 60 aa11.61□□□□□ -0.55
LINC00339-209ENST00000635450 CCSO14618 274 aa11.61□□□□□ -0.55
LINC00339-209ENST00000635450 FABP1P07148 127 aa11.61□□□□□ -0.55
LINC00339-209ENST00000635450 RD3LP0DJH9 198 aa11.61□□□□□ -0.55
LINC00339-209ENST00000635450 IFITM3Q01628 133 aa11.61□□□□□ -0.55
LINC00339-209ENST00000635450 GRAMD2BQ96HH9 432 aa11.61□□□□□ -0.55
LINC00339-209ENST00000635450 APOHP02749 345 aaPredicted RBP11.6□□□□□ -0.55
LINC00339-209ENST00000635450 IL4P05112 153 aa11.6□□□□□ -0.55
LINC00339-209ENST00000635450 IL5P05113 134 aa11.6□□□□□ -0.55
LINC00339-209ENST00000635450 HNRNPCP07910 306 aaKnown RBP eCLIP11.6□□□□□ -0.55
LINC00339-209ENST00000635450 CRYBB3P26998 211 aa11.6□□□□□ -0.55
LINC00339-209ENST00000635450 RPL11P62913 178 aaKnown RBP11.6□□□□□ -0.55
LINC00339-209ENST00000635450 SMIM8Q96KF7 97 aa11.6□□□□□ -0.55
LINC00339-209ENST00000635450 RAB40CQ96S21 281 aa11.6□□□□□ -0.55
LINC00339-209ENST00000635450 DNASE2O00115 360 aaPredicted RBP11.59□□□□□ -0.55
LINC00339-209ENST00000635450 PSG1P11464 419 aa11.59□□□□□ -0.55
LINC00339-209ENST00000635450 TFPI2P48307 235 aa11.59□□□□□ -0.55
LINC00339-209ENST00000635450 EIF2B2P49770 351 aaKnown RBP11.59□□□□□ -0.55
LINC00339-209ENST00000635450 CMC4P56277 68 aaPredicted RBP11.59□□□□□ -0.55
LINC00339-209ENST00000635450 FAM90A2PQ658T7 463 aa11.59□□□□□ -0.55
LINC00339-209ENST00000635450 GSG1LQ6UXU4 331 aa11.59□□□□□ -0.55
LINC00339-209ENST00000635450 NRARPQ7Z6K4 114 aa11.59□□□□□ -0.55
LINC00339-209ENST00000635450 OR51G1Q8NGK1 321 aa11.59□□□□□ -0.55
LINC00339-209ENST00000635450 UBQLN2Q9UHD9 624 aa11.59□□□□□ -0.55
LINC00339-209ENST00000635450 RABAC1Q9UI14 185 aa11.59□□□□□ -0.55
LINC00339-209ENST00000635450 LCE6AA0A183 80 aa11.58□□□□□ -0.56
LINC00339-209ENST00000635450 L7N2F9 121 aa11.58□□□□□ -0.56
LINC00339-209ENST00000635450 PRAF2O60831 178 aa11.58□□□□□ -0.56
LINC00339-209ENST00000635450 DFFBO76075 338 aa11.58□□□□□ -0.56
LINC00339-209ENST00000635450 P2RY1P47900 373 aa11.58□□□□□ -0.56
LINC00339-209ENST00000635450 TAS2R30P59541 319 aa11.58□□□□□ -0.56
LINC00339-209ENST00000635450 VAMP2P63027 116 aa11.58□□□□□ -0.56
LINC00339-209ENST00000635450 AKR1C1Q04828 323 aa11.58□□□□□ -0.56
LINC00339-209ENST00000635450 OR8G2PQ6IF36 304 aa11.58□□□□□ -0.56
LINC00339-209ENST00000635450 GBGT1Q8N5D6 347 aa11.58□□□□□ -0.56
LINC00339-209ENST00000635450 C2orf50Q96LR7 162 aa11.58□□□□□ -0.56
LINC00339-209ENST00000635450 TRGV9Q99603 122 aa11.58□□□□□ -0.56
LINC00339-209ENST00000635450 PFDN2Q9UHV9 154 aa11.58□□□□□ -0.56
LINC00339-209ENST00000635450 ALMS1Q8TCU4 4167 aa11.58□□□□□ -0.56
LINC00339-209ENST00000635450 PLECQ15149 4684 aaKnown RBP11.57□□□□□ -0.56
LINC00339-209ENST00000635450 SNRPGP15A8MWD9 76 aa11.57□□□□□ -0.56
LINC00339-209ENST00000635450 PRSS46E5RG02 174 aa11.57□□□□□ -0.56
LINC00339-209ENST00000635450 INMT-MINDY4F8WBC2 141 aa11.57□□□□□ -0.56
LINC00339-209ENST00000635450 MBPP02686 304 aaPredicted RBP11.57□□□□□ -0.56
LINC00339-209ENST00000635450 ZNF90Q03938 601 aa11.57□□□□□ -0.56
LINC00339-209ENST00000635450 USF2Q15853 346 aaPredicted RBP11.57□□□□□ -0.56
LINC00339-209ENST00000635450 WFDC3Q8IUB2 231 aa11.57□□□□□ -0.56
LINC00339-209ENST00000635450 LILRB2Q8N423 598 aa11.57□□□□□ -0.56
LINC00339-209ENST00000635450 RNF125Q96EQ8 232 aa11.57□□□□□ -0.56
LINC00339-209ENST00000635450 PBDC1Q9BVG4 233 aa11.57□□□□□ -0.56
LINC00339-209ENST00000635450 RCL1Q9Y2P8 373 aaKnown RBP11.57□□□□□ -0.56
LINC00339-209ENST00000635450 LSM5Q9Y4Y9 91 aaKnown RBP11.57□□□□□ -0.56
LINC00339-209ENST00000635450 IGKV1D-37A0A075B6S9 117 aa11.56□□□□□ -0.56
LINC00339-209ENST00000635450 LOC102724200A0A096LPH7 203 aaPredicted RBP11.56□□□□□ -0.56
LINC00339-209ENST00000635450 SMCO3A2RU48 225 aa11.56□□□□□ -0.56
LINC00339-209ENST00000635450 HELTA6NFD8 242 aa11.56□□□□□ -0.56
LINC00339-209ENST00000635450 TSC22D2O75157 780 aa11.56□□□□□ -0.56
LINC00339-209ENST00000635450 CFDP00746 253 aaPredicted RBP11.56□□□□□ -0.56
LINC00339-209ENST00000635450 PVALBP20472 110 aaPredicted RBP11.56□□□□□ -0.56
LINC00339-209ENST00000635450 NUP62P37198 522 aaPredicted RBP11.56□□□□□ -0.56
LINC00339-209ENST00000635450 PAX9P55771 341 aa11.56□□□□□ -0.56
LINC00339-209ENST00000635450 ODF3L2Q3SX64 289 aa11.56□□□□□ -0.56
LINC00339-209ENST00000635450 ACOT7LQ6ZUV0 252 aa11.56□□□□□ -0.56
LINC00339-209ENST00000635450 THAP8Q8NA92 274 aa11.56□□□□□ -0.56
LINC00339-209ENST00000635450 OR10P1Q8NGE3 313 aa11.56□□□□□ -0.56
LINC00339-209ENST00000635450 MS4A6AQ9H2W1 248 aa11.56□□□□□ -0.56
LINC00339-209ENST00000635450 U3KQE9 123 aa11.56□□□□□ -0.56
LINC00339-209ENST00000635450 HYDINQ4G0P3 5121 aa11.56□□□□□ -0.56
LINC00339-209ENST00000635450 TRAV2A0A0B4J234 112 aa11.55□□□□□ -0.56
LINC00339-209ENST00000635450 METTL15P1P0C7V9 234 aa11.55□□□□□ -0.56
LINC00339-209ENST00000635450 AP2S1P53680 142 aaPredicted RBP11.55□□□□□ -0.56
LINC00339-209ENST00000635450 LYZP61626 148 aa11.55□□□□□ -0.56
LINC00339-209ENST00000635450 OR2F1Q13607 317 aa11.55□□□□□ -0.56
LINC00339-209ENST00000635450 C16orf54Q6UWD8 224 aa11.55□□□□□ -0.56
LINC00339-209ENST00000635450 TMEM14EPQ6UXP3 125 aa11.55□□□□□ -0.56
LINC00339-209ENST00000635450 STXBP6Q8NFX7 210 aa11.55□□□□□ -0.56
LINC00339-209ENST00000635450 GGTLC1Q9BX51 225 aa11.55□□□□□ -0.56
LINC00339-209ENST00000635450 MGAT4CQ9UBM8 478 aa11.55□□□□□ -0.56
LINC00339-209ENST00000635450 IGKV1OR2-108A0A075B7D4 117 aa11.54□□□□□ -0.56
LINC00339-209ENST00000635450 C7orf66A4D0T2 115 aa11.54□□□□□ -0.56
LINC00339-209ENST00000635450 K7EPK0 472 aa11.54□□□□□ -0.56
LINC00339-209ENST00000635450 BCAP31P51572 246 aa11.54□□□□□ -0.56
LINC00339-209ENST00000635450 S100A10P60903 97 aa11.54□□□□□ -0.56
LINC00339-209ENST00000635450 DLK1P80370 383 aa11.54□□□□□ -0.56
LINC00339-209ENST00000635450 TMEM144Q7Z5S9 345 aa11.54□□□□□ -0.56
LINC00339-209ENST00000635450 PPP1R14BQ96C90 147 aa11.54□□□□□ -0.56
LINC00339-209ENST00000635450 MARVELD1Q9BSK0 173 aa11.54□□□□□ -0.56
LINC00339-209ENST00000635450 EPPK1P58107 5090 aaKnown RBP11.53□□□□□ -0.56
LINC00339-209ENST00000635450 PMS2P5A8MQ11 134 aa11.53□□□□□ -0.56
LINC00339-209ENST00000635450 BUB3O43684 328 aa11.53□□□□□ -0.56
LINC00339-209ENST00000635450 APOC4P55056 127 aa11.53□□□□□ -0.56
LINC00339-209ENST00000635450 RRAS2P62070 204 aaPredicted RBP11.53□□□□□ -0.56
LINC00339-209ENST00000635450 BPIFCQ8NFQ6 507 aa11.53□□□□□ -0.56
LINC00339-209ENST00000635450 MAP6D1Q9H9H5 199 aa11.53□□□□□ -0.56
LINC00339-209ENST00000635450 NPVFQ9HCQ7 196 aa11.53□□□□□ -0.56
LINC00339-209ENST00000635450 FNDC10F2Z333 226 aa11.52□□□□□ -0.57
LINC00339-209ENST00000635450 GOSR2O14653 212 aa11.52□□□□□ -0.57
LINC00339-209ENST00000635450 CCNKO75909 580 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms