RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 YPEL1O60688 119 aa3.79□□□□□ -1.8
LINC00550-201ENST00000629293 IFNA17P01571 189 aa3.79□□□□□ -1.8
LINC00550-201ENST00000629293 IGHV3-43DP0DP04 118 aa3.79□□□□□ -1.8
LINC00550-201ENST00000629293 ELLP55199 621 aaPredicted RBP3.79□□□□□ -1.8
LINC00550-201ENST00000629293 LINC00205P59089 165 aa3.79□□□□□ -1.8
LINC00550-201ENST00000629293 CD81P60033 236 aa3.79□□□□□ -1.8
LINC00550-201ENST00000629293 FABP9Q0Z7S8 132 aa3.79□□□□□ -1.8
LINC00550-201ENST00000629293 LTC4SQ16873 150 aa3.79□□□□□ -1.8
LINC00550-201ENST00000629293 TCTEX1D4Q5JR98 221 aa3.79□□□□□ -1.8
LINC00550-201ENST00000629293 OR8G2PQ6IF36 304 aa3.79□□□□□ -1.8
LINC00550-201ENST00000629293 ZNF343Q6P1L6 599 aa3.79□□□□□ -1.8
LINC00550-201ENST00000629293 TEX38Q6PEX7 206 aa3.79□□□□□ -1.8
LINC00550-201ENST00000629293 C11orf42Q8N5U0 333 aa3.79□□□□□ -1.8
LINC00550-201ENST00000629293 DDB2Q92466 427 aa3.79□□□□□ -1.8
LINC00550-201ENST00000629293 NOL4LQ96MY1 436 aaPredicted RBP3.79□□□□□ -1.8
LINC00550-201ENST00000629293 ZNF714Q96N38 554 aa3.79□□□□□ -1.8
LINC00550-201ENST00000629293 YPEL2Q96QA6 119 aa3.79□□□□□ -1.8
LINC00550-201ENST00000629293 SLC25A33Q9BSK2 321 aa3.79□□□□□ -1.8
LINC00550-201ENST00000629293 IFI27L2Q9H2X8 130 aa3.79□□□□□ -1.8
LINC00550-201ENST00000629293 SDF2L1Q9HCN8 221 aa3.79□□□□□ -1.8
LINC00550-201ENST00000629293 PSG11Q9UQ72 335 aa3.79□□□□□ -1.8
LINC00550-201ENST00000629293 GAB2Q9UQC2 676 aa3.79□□□□□ -1.8
LINC00550-201ENST00000629293 CTXND1A0A1B0GTU2 59 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 PRSS46E5RG02 174 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 PHOX2AO14813 284 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 IFNA1P01562 189 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 S100A6P06703 90 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 OR9G9P0C7N8 305 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 IGHV1-8P0DP01 117 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 FGF7P21781 194 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 HTR1DP28221 377 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 OR2B8PP59922 312 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 RAB11AP62491 216 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 MORN2Q502X0 79 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 PRAMEF5Q5TYX0 476 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 C18orf65Q6ZTR6 163 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 H2BFWTQ7Z2G1 175 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 FAM110AQ9BQ89 295 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 NPCDR1Q9BY65 106 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 DNAH9Q9NYC9 4486 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 DSCAML1Q8TD84 2053 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 TGIF2-C20orf24A0A0A6YYL0 155 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 SEC14L6B5MCN3 397 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 NPIPB6E9PJ23 425 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 TMEM250H0YL14 139 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 CLN5O75503 358 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 MBP02144 154 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 GZMHP20718 246 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 CEBPGP53567 150 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 DEFB136Q30KP8 78 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 LCNL1Q6ZST4 164 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 CYP2G1PQ6ZSU1 146 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 OR10P1Q8NGE3 313 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 OR52E5Q8NH55 327 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 RFESDQ8TAC1 157 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 TCEAL7Q9BRU2 100 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 QTRT1Q9BXR0 403 aaKnown RBP3.78□□□□□ -1.8
LINC00550-201ENST00000629293 OR6C3Q9NZP0 311 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 WDR83OSQ9Y284 106 aa3.78□□□□□ -1.8
LINC00550-201ENST00000629293 IGHV2-26A0A0B4J1V2 119 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 hADV38S2A0JD32 116 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 PSMB11A5LHX3 300 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 IFITM10A6NMD0 228 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 CEBPZOSA8MTT3 80 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 MMP23AO75900 390 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 KBTBD11O94819 623 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 HPRT1P00492 218 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 NQO2P16083 231 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 HOXA5P20719 270 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 BRS3P32247 399 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 GPR12P47775 334 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 MEF2BQ02080 365 aaPredicted RBP3.77□□□□□ -1.81
LINC00550-201ENST00000629293 C17orf58Q2M2W7 97 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 TCF23Q7RTU1 214 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 KLHL30-AS1Q8NEE0 82 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 WFDC9Q8NEX5 89 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 CLEC7AQ9BXN2 247 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 LINC00574Q9H8X3 128 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 SLC25A22Q9H936 323 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 MANBALQ9NQG1 85 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 TRBV24-1A0A075B6N3 115 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 PCP4L1A6NKN8 68 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 CGB1A6NKQ9 187 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 KIR2DS2P43631 304 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 RPS10P46783 165 aaKnown RBP3.77□□□□□ -1.81
LINC00550-201ENST00000629293 SPCS3P61009 180 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 B2MP61769 119 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 FFAR4Q5NUL3 377 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 ABHD12Q8N2K0 398 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.77□□□□□ -1.81
LINC00550-201ENST00000629293 OR10G9Q8NGN4 311 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 OR10G7Q8NGN6 311 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 LEAP2Q969E1 77 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 ZNF251Q9BRH9 671 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 TM2D2Q9BX73 214 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 SLC39A9Q9NUM3 307 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 CALYQ9NYX4 217 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 TBL2Q9Y4P3 447 aaKnown RBP3.77□□□□□ -1.81
LINC00550-201ENST00000629293 SLC31A2O15432 143 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 SOX15O60248 233 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms