RNA–Protein interactions for RNA: ENST00000629089.1

SPTAN1-217, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-217ENST00000629089 SHISA2Q6UWI4 295 aa13.57□□□□□ -0.24
SPTAN1-217ENST00000629089 PUS1Q9Y606 427 aaKnown RBP eCLIP13.57□□□□□ -0.24
SPTAN1-217ENST00000629089 ATP6V0CP27449 155 aa13.56□□□□□ -0.24
SPTAN1-217ENST00000629089 MIC13Q5XKP0 118 aa13.56□□□□□ -0.24
SPTAN1-217ENST00000629089 TMEM182Q6ZP80 229 aaPredicted RBP13.56□□□□□ -0.24
SPTAN1-217ENST00000629089 SLC51BQ86UW2 128 aa13.56□□□□□ -0.24
SPTAN1-217ENST00000629089 OR51G1Q8NGK1 321 aa13.56□□□□□ -0.24
SPTAN1-217ENST00000629089 MDFIQ99750 246 aa13.56□□□□□ -0.24
SPTAN1-217ENST00000629089 KCNIP2Q9NS61 270 aa13.56□□□□□ -0.24
SPTAN1-217ENST00000629089 SLC45A2Q9UMX9 530 aa13.56□□□□□ -0.24
SPTAN1-217ENST00000629089 NDUFA4O00483 81 aa13.55□□□□□ -0.24
SPTAN1-217ENST00000629089 IL4P05112 153 aa13.55□□□□□ -0.24
SPTAN1-217ENST00000629089 TPT1P13693 172 aaKnown RBP13.55□□□□□ -0.24
SPTAN1-217ENST00000629089 RPL29P47914 159 aaKnown RBP13.55□□□□□ -0.24
SPTAN1-217ENST00000629089 SLURP1P55000 103 aa13.55□□□□□ -0.24
SPTAN1-217ENST00000629089 FAM106AQ4KMX7 169 aa13.55□□□□□ -0.24
SPTAN1-217ENST00000629089 STPG3Q8N7X2 389 aa13.55□□□□□ -0.24
SPTAN1-217ENST00000629089 GNPNAT1Q96EK6 184 aaPredicted RBP13.55□□□□□ -0.24
SPTAN1-217ENST00000629089 PXMP4Q9Y6I8 212 aa13.55□□□□□ -0.24
SPTAN1-217ENST00000629089 ZNF320A2RRD8 509 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 LINC00869P0C866 280 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 LYZP61626 148 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 B2MP61769 119 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 TOMM20LQ6UXN7 152 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 Q6ZRG5 221 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 GPHB5Q86YW7 130 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 OR4F17Q8NGA8 305 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 OR4F4Q96R69 305 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 GINS3Q9BRX5 216 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 C20orf24Q9BUV8 137 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 PBDC1Q9BVG4 233 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 IGHV3OR16-8A0A075B7F1 116 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 TSPAN15O95858 294 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 CFDP00746 253 aaPredicted RBP13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 PF4P02776 101 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 MYCNOSP40205 109 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 FHL3Q13643 280 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 BAP18Q8IXM2 172 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 STOML3Q8TAV4 291 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 RCC1LQ96I51 464 aaKnown RBP13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 SH3BGRL3Q9H299 93 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 ARV1Q9H2C2 271 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 SLC25A32Q9H2D1 315 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 SLC39A9Q9NUM3 307 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 TIMM9Q9Y5J7 89 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 RFNGQ9Y644 331 aa13.54□□□□□ -0.24
SPTAN1-217ENST00000629089 ORM2P19652 201 aa13.53□□□□□ -0.24
SPTAN1-217ENST00000629089 SYNJ2BPP57105 145 aa13.53□□□□□ -0.24
SPTAN1-217ENST00000629089 PRR20EP86478 221 aa13.53□□□□□ -0.24
SPTAN1-217ENST00000629089 PRR20CP86479 221 aa13.53□□□□□ -0.24
SPTAN1-217ENST00000629089 PRR20DP86480 221 aa13.53□□□□□ -0.24
SPTAN1-217ENST00000629089 PRR20BP86481 221 aa13.53□□□□□ -0.24
SPTAN1-217ENST00000629089 PRR20AP86496 221 aa13.53□□□□□ -0.24
SPTAN1-217ENST00000629089 UNQ9165/PRO28630Q6UXU0 137 aa13.53□□□□□ -0.24
SPTAN1-217ENST00000629089 C1QL4Q86Z23 238 aa13.53□□□□□ -0.24
SPTAN1-217ENST00000629089 OR1B1Q8NGR6 318 aa13.53□□□□□ -0.24
SPTAN1-217ENST00000629089 ST8SIA2Q92186 375 aa13.53□□□□□ -0.24
SPTAN1-217ENST00000629089 RNF125Q96EQ8 232 aa13.53□□□□□ -0.24
SPTAN1-217ENST00000629089 ZNF414Q96IQ9 312 aa13.53□□□□□ -0.24
SPTAN1-217ENST00000629089 PSMG3Q9BT73 122 aaPredicted RBP13.53□□□□□ -0.24
SPTAN1-217ENST00000629089 ZFAND3Q9H8U3 227 aa13.53□□□□□ -0.24
SPTAN1-217ENST00000629089 ELLP55199 621 aaPredicted RBP13.52□□□□□ -0.25
SPTAN1-217ENST00000629089 KLF5Q13887 457 aaPredicted RBP13.52□□□□□ -0.25
SPTAN1-217ENST00000629089 FFAR4Q5NUL3 377 aa13.52□□□□□ -0.25
SPTAN1-217ENST00000629089 OR2G3Q8NGZ4 309 aa13.52□□□□□ -0.25
SPTAN1-217ENST00000629089 TMEM190Q8WZ59 177 aa13.52□□□□□ -0.25
SPTAN1-217ENST00000629089 DOK5Q9P104 306 aa13.52□□□□□ -0.25
SPTAN1-217ENST00000629089 WI2-2373I1.2A0A1W2PRP0 233 aa13.51□□□□□ -0.25
SPTAN1-217ENST00000629089 SPP1P10451 314 aa13.51□□□□□ -0.25
SPTAN1-217ENST00000629089 DLX4Q92988 240 aaPredicted RBP13.51□□□□□ -0.25
SPTAN1-217ENST00000629089 LGALS9O00182 355 aa13.5□□□□□ -0.25
SPTAN1-217ENST00000629089 ZNF207O43670 478 aaKnown RBP13.5□□□□□ -0.25
SPTAN1-217ENST00000629089 OR5G3P0C626 314 aa13.5□□□□□ -0.25
SPTAN1-217ENST00000629089 SERF2P84101 59 aa13.5□□□□□ -0.25
SPTAN1-217ENST00000629089 USF2Q15853 346 aaPredicted RBP13.5□□□□□ -0.25
SPTAN1-217ENST00000629089 PXDC1Q5TGL8 231 aa13.5□□□□□ -0.25
SPTAN1-217ENST00000629089 REC114Q7Z4M0 266 aa13.5□□□□□ -0.25
SPTAN1-217ENST00000629089 RABAC1Q9UI14 185 aa13.5□□□□□ -0.25
SPTAN1-217ENST00000629089 UFC1Q9Y3C8 167 aa13.5□□□□□ -0.25
SPTAN1-217ENST00000629089 M0QZ24 198 aa13.49□□□□□ -0.25
SPTAN1-217ENST00000629089 COX7A2P2O60397 106 aa13.49□□□□□ -0.25
SPTAN1-217ENST00000629089 HYPMO75409 117 aa13.49□□□□□ -0.25
SPTAN1-217ENST00000629089 SEC11BP0C7V7 166 aa13.49□□□□□ -0.25
SPTAN1-217ENST00000629089 PLP1P60201 277 aa13.49□□□□□ -0.25
SPTAN1-217ENST00000629089 EIF5AL1Q6IS14 154 aaKnown RBP13.49□□□□□ -0.25
SPTAN1-217ENST00000629089 OR1L4Q8NGR5 311 aa13.49□□□□□ -0.25
SPTAN1-217ENST00000629089 METTL26Q96S19 204 aa13.49□□□□□ -0.25
SPTAN1-217ENST00000629089 ACOT6Q3I5F7 207 aaPredicted RBP13.49□□□□□ -0.25
SPTAN1-217ENST00000629089 TMED6Q8WW62 240 aa13.49□□□□□ -0.25
SPTAN1-217ENST00000629089 PFDN5Q99471 154 aa13.49□□□□□ -0.25
SPTAN1-217ENST00000629089 DAZ1Q9NQZ3 744 aaKnown RBP13.49□□□□□ -0.25
SPTAN1-217ENST00000629089 PEMTQ9UBM1 199 aa13.49□□□□□ -0.25
SPTAN1-217ENST00000629089 TENM1Q9UKZ4 2725 aa13.48□□□□□ -0.25
SPTAN1-217ENST00000629089 ELOA3CA0A087WX78 387 aaPredicted RBP13.48□□□□□ -0.25
SPTAN1-217ENST00000629089 OVOL1O14753 267 aa13.48□□□□□ -0.25
SPTAN1-217ENST00000629089 NPPCP23582 126 aa13.48□□□□□ -0.25
SPTAN1-217ENST00000629089 TM4SF20Q53R12 229 aa13.48□□□□□ -0.25
SPTAN1-217ENST00000629089 GCSAMLQ5JQS6 135 aa13.48□□□□□ -0.25
SPTAN1-217ENST00000629089 AKR1C8PQ5T2L2 129 aa13.48□□□□□ -0.25
SPTAN1-217ENST00000629089 C10orf113Q5VZT2 155 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms