RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 NUP62P37198 522 aaPredicted RBP11.17□□□□□ -0.62
PNKP-221ENST00000627317 NHLH2Q02577 135 aa11.17□□□□□ -0.62
PNKP-221ENST00000627317 ZNF90Q03938 601 aa11.17□□□□□ -0.62
PNKP-221ENST00000627317 OR2F1Q13607 317 aa11.17□□□□□ -0.62
PNKP-221ENST00000627317 ATP6V1FQ16864 119 aa11.17□□□□□ -0.62
PNKP-221ENST00000627317 IL34Q6ZMJ4 242 aa11.17□□□□□ -0.62
PNKP-221ENST00000627317 OR51G1Q8NGK1 321 aa11.17□□□□□ -0.62
PNKP-221ENST00000627317 OR5C1Q8NGR4 320 aa11.17□□□□□ -0.62
PNKP-221ENST00000627317 CHAC2Q8WUX2 184 aa11.17□□□□□ -0.62
PNKP-221ENST00000627317 ZNF414Q96IQ9 312 aa11.17□□□□□ -0.62
PNKP-221ENST00000627317 ZFAND3Q9H8U3 227 aa11.17□□□□□ -0.62
PNKP-221ENST00000627317 SIGLEC8Q9NYZ4 499 aa11.17□□□□□ -0.62
PNKP-221ENST00000627317 HSPB11Q9Y547 144 aa11.17□□□□□ -0.62
PNKP-221ENST00000627317 FXYD6-FXYD2A0A087WZ82 144 aa11.16□□□□□ -0.62
PNKP-221ENST00000627317 UBE2L5PA0A1B0GUS4 154 aa11.16□□□□□ -0.62
PNKP-221ENST00000627317 PSG1P11464 419 aa11.16□□□□□ -0.62
PNKP-221ENST00000627317 EDN2P20800 178 aa11.16□□□□□ -0.62
PNKP-221ENST00000627317 CBLN1P23435 193 aa11.16□□□□□ -0.62
PNKP-221ENST00000627317 CLINT1Q14677 625 aa11.16□□□□□ -0.62
PNKP-221ENST00000627317 TEPPQ6URK8 271 aa11.16□□□□□ -0.62
PNKP-221ENST00000627317 METTL26Q96S19 204 aa11.16□□□□□ -0.62
PNKP-221ENST00000627317 MRPL27Q9P0M9 148 aaKnown RBP11.16□□□□□ -0.62
PNKP-221ENST00000627317 BMI1P35226 326 aa11.15□□□□□ -0.62
PNKP-221ENST00000627317 LYZP61626 148 aa11.15□□□□□ -0.62
PNKP-221ENST00000627317 RAB31Q13636 194 aa11.15□□□□□ -0.62
PNKP-221ENST00000627317 VWC2Q2TAL6 325 aa11.15□□□□□ -0.62
PNKP-221ENST00000627317 Q5BKY6 102 aa11.15□□□□□ -0.62
PNKP-221ENST00000627317 CYP2G1PQ6ZSU1 146 aa11.15□□□□□ -0.62
PNKP-221ENST00000627317 BPIFCQ8NFQ6 507 aa11.15□□□□□ -0.62
PNKP-221ENST00000627317 RNF125Q96EQ8 232 aa11.15□□□□□ -0.62
PNKP-221ENST00000627317 NARS2Q96I59 477 aaKnown RBP11.15□□□□□ -0.62
PNKP-221ENST00000627317 PBDC1Q9BVG4 233 aa11.15□□□□□ -0.62
PNKP-221ENST00000627317 ZMAT5Q9UDW3 170 aaKnown RBP11.15□□□□□ -0.62
PNKP-221ENST00000627317 IGHV3-49A0A0A0MS15 119 aa11.14□□□□□ -0.63
PNKP-221ENST00000627317 IGHV7-4-1A0A0J9YVY3 117 aa11.14□□□□□ -0.63
PNKP-221ENST00000627317 CFDP00746 253 aaPredicted RBP11.14□□□□□ -0.63
PNKP-221ENST00000627317 IGLV1-51P01701 117 aa11.14□□□□□ -0.63
PNKP-221ENST00000627317 NPPCP23582 126 aa11.14□□□□□ -0.63
PNKP-221ENST00000627317 SELENOTP62341 195 aa11.14□□□□□ -0.63
PNKP-221ENST00000627317 BTNL8Q6UX41 500 aa11.14□□□□□ -0.63
PNKP-221ENST00000627317 ADAMTSL5Q6ZMM2 481 aa11.14□□□□□ -0.63
PNKP-221ENST00000627317 ZNF546Q86UE3 836 aa11.14□□□□□ -0.63
PNKP-221ENST00000627317 INO80EQ8NBZ0 244 aaPredicted RBP11.14□□□□□ -0.63
PNKP-221ENST00000627317 TECRQ9NZ01 308 aaKnown RBP11.14□□□□□ -0.63
PNKP-221ENST00000627317 SMPXQ9UHP9 88 aa11.14□□□□□ -0.63
PNKP-221ENST00000627317 WDR83OSQ9Y284 106 aa11.14□□□□□ -0.63
PNKP-221ENST00000627317 LSM4Q9Y4Z0 139 aaKnown RBP11.14□□□□□ -0.63
PNKP-221ENST00000627317 SMLR1H3BR10 107 aa11.13□□□□□ -0.63
PNKP-221ENST00000627317 C8orf88P0DMB2 117 aa11.13□□□□□ -0.63
PNKP-221ENST00000627317 FGF7P21781 194 aa11.13□□□□□ -0.63
PNKP-221ENST00000627317 USF2Q15853 346 aaPredicted RBP11.13□□□□□ -0.63
PNKP-221ENST00000627317 LCN12Q6JVE5 192 aa11.13□□□□□ -0.63
PNKP-221ENST00000627317 AQP10Q96PS8 301 aa11.13□□□□□ -0.63
PNKP-221ENST00000627317 ATP5SQ99766 215 aa11.13□□□□□ -0.63
PNKP-221ENST00000627317 SMIM3Q9BZL3 60 aa11.13□□□□□ -0.63
PNKP-221ENST00000627317 TMEM231Q9H6L2 316 aa11.13□□□□□ -0.63
PNKP-221ENST00000627317 MLXQ9UH92 298 aa11.13□□□□□ -0.63
PNKP-221ENST00000627317 RABAC1Q9UI14 185 aa11.13□□□□□ -0.63
PNKP-221ENST00000627317 DNAH9Q9NYC9 4486 aa11.13□□□□□ -0.63
PNKP-221ENST00000627317 IGHV3OR16-13A0A075B7E8 117 aa11.12□□□□□ -0.63
PNKP-221ENST00000627317 IGHV3-74A0A0B4J1X5 117 aa11.12□□□□□ -0.63
PNKP-221ENST00000627317 G3V3Q6 166 aa11.12□□□□□ -0.63
PNKP-221ENST00000627317 AGPAT2O15120 278 aa11.12□□□□□ -0.63
PNKP-221ENST00000627317 DFFBO76075 338 aa11.12□□□□□ -0.63
PNKP-221ENST00000627317 HNRNPCP07910 306 aaKnown RBP eCLIP11.12□□□□□ -0.63
PNKP-221ENST00000627317 LINC00869P0C866 280 aa11.12□□□□□ -0.63
PNKP-221ENST00000627317 GATA2P23769 480 aaPredicted RBP11.12□□□□□ -0.63
PNKP-221ENST00000627317 CAMLGP49069 296 aa11.12□□□□□ -0.63
PNKP-221ENST00000627317 DEFB114Q30KQ6 69 aa11.12□□□□□ -0.63
PNKP-221ENST00000627317 OR2K2Q8NGT1 345 aa11.12□□□□□ -0.63
PNKP-221ENST00000627317 MGST2Q99735 147 aa11.12□□□□□ -0.63
PNKP-221ENST00000627317 RHPN1-AS1Q9BWJ2 59 aa11.12□□□□□ -0.63
PNKP-221ENST00000627317 PFDN2Q9UHV9 154 aa11.12□□□□□ -0.63
PNKP-221ENST00000627317 SELENOKQ9Y6D0 94 aa11.12□□□□□ -0.63
PNKP-221ENST00000627317 A0A1W2PS18 150 aa11.11□□□□□ -0.63
PNKP-221ENST00000627317 CHEK1O14757 476 aa11.11□□□□□ -0.63
PNKP-221ENST00000627317 MPDU1O75352 247 aa11.11□□□□□ -0.63
PNKP-221ENST00000627317 IFNA5P01569 189 aa11.11□□□□□ -0.63
PNKP-221ENST00000627317 CRYBB3P26998 211 aa11.11□□□□□ -0.63
PNKP-221ENST00000627317 EIF2B2P49770 351 aaKnown RBP11.11□□□□□ -0.63
PNKP-221ENST00000627317 CD300EQ496F6 205 aaPredicted RBP11.11□□□□□ -0.63
PNKP-221ENST00000627317 ST8SIA2Q92186 375 aa11.11□□□□□ -0.63
PNKP-221ENST00000627317 PPP1R14BQ96C90 147 aa11.11□□□□□ -0.63
PNKP-221ENST00000627317 GRAMD2BQ96HH9 432 aa11.11□□□□□ -0.63
PNKP-221ENST00000627317 GGTLC1Q9BX51 225 aa11.11□□□□□ -0.63
PNKP-221ENST00000627317 FBXL17Q9UF56 701 aa11.11□□□□□ -0.63
PNKP-221ENST00000627317 SLC45A2Q9UMX9 530 aa11.11□□□□□ -0.63
PNKP-221ENST00000627317 TNFSF18Q9UNG2 199 aa11.11□□□□□ -0.63
PNKP-221ENST00000627317 IGHV3-66A0A0C4DH42 116 aa11.1□□□□□ -0.63
PNKP-221ENST00000627317 A0A1B0GVG6 124 aa11.1□□□□□ -0.63
PNKP-221ENST00000627317 ARPC5O15511 151 aa11.1□□□□□ -0.63
PNKP-221ENST00000627317 APOHP02749 345 aaPredicted RBP11.1□□□□□ -0.63
PNKP-221ENST00000627317 ORM2P19652 201 aa11.1□□□□□ -0.63
PNKP-221ENST00000627317 AP2S1P53680 142 aaPredicted RBP11.1□□□□□ -0.63
PNKP-221ENST00000627317 LAMTOR1Q6IAA8 161 aa11.1□□□□□ -0.63
PNKP-221ENST00000627317 TMEM182Q6ZP80 229 aaPredicted RBP11.1□□□□□ -0.63
PNKP-221ENST00000627317 RBPMS2Q6ZRY4 209 aaKnown RBP11.1□□□□□ -0.63
PNKP-221ENST00000627317 AKAP14Q86UN6 197 aa11.1□□□□□ -0.63
PNKP-221ENST00000627317 ZNF709Q8N972 641 aa11.1□□□□□ -0.63
PNKP-221ENST00000627317 OR1B1Q8NGR6 318 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms