RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 METTL26Q96S19 204 aa14.49□□□□□ -0.09
SQSTM1-216ENST00000626660 UQCC1Q9NVA1 299 aa14.49□□□□□ -0.09
SQSTM1-216ENST00000626660 IGKV1OR2-108A0A075B7D4 117 aa14.48□□□□□ -0.09
SQSTM1-216ENST00000626660 IGHV7-4-1A0A0J9YVY3 117 aa14.48□□□□□ -0.09
SQSTM1-216ENST00000626660 CFDP00746 253 aaPredicted RBP14.48□□□□□ -0.09
SQSTM1-216ENST00000626660 NPPCP23582 126 aa14.48□□□□□ -0.09
SQSTM1-216ENST00000626660 ZNF90Q03938 601 aa14.48□□□□□ -0.09
SQSTM1-216ENST00000626660 OR2F1Q13607 317 aa14.48□□□□□ -0.09
SQSTM1-216ENST00000626660 LCN12Q6JVE5 192 aa14.48□□□□□ -0.09
SQSTM1-216ENST00000626660 TEPPQ6URK8 271 aa14.48□□□□□ -0.09
SQSTM1-216ENST00000626660 TMEM147Q9BVK8 224 aa14.48□□□□□ -0.09
SQSTM1-216ENST00000626660 SMPXQ9UHP9 88 aa14.48□□□□□ -0.09
SQSTM1-216ENST00000626660 LYL1P12980 280 aa14.47□□□□□ -0.09
SQSTM1-216ENST00000626660 NHLH2Q02577 135 aa14.47□□□□□ -0.09
SQSTM1-216ENST00000626660 DEFB114Q30KQ6 69 aa14.47□□□□□ -0.09
SQSTM1-216ENST00000626660 BTNL8Q6UX41 500 aa14.47□□□□□ -0.09
SQSTM1-216ENST00000626660 Q6ZNX1 250 aa14.47□□□□□ -0.09
SQSTM1-216ENST00000626660 BPIFCQ8NFQ6 507 aa14.47□□□□□ -0.09
SQSTM1-216ENST00000626660 TMEM231Q9H6L2 316 aa14.47□□□□□ -0.09
SQSTM1-216ENST00000626660 ZNF256Q9Y2P7 627 aaPredicted RBP14.47□□□□□ -0.09
SQSTM1-216ENST00000626660 A0A1W2PS18 150 aa14.46□□□□□ -0.09
SQSTM1-216ENST00000626660 RPL12P30050 165 aaKnown RBP14.46□□□□□ -0.09
SQSTM1-216ENST00000626660 NUP62P37198 522 aaPredicted RBP14.46□□□□□ -0.09
SQSTM1-216ENST00000626660 KRTAP10-11P60412 298 aa14.46□□□□□ -0.09
SQSTM1-216ENST00000626660 SELENOTP62341 195 aa14.46□□□□□ -0.09
SQSTM1-216ENST00000626660 RAB31Q13636 194 aa14.46□□□□□ -0.09
SQSTM1-216ENST00000626660 CD300EQ496F6 205 aaPredicted RBP14.46□□□□□ -0.09
SQSTM1-216ENST00000626660 CYP2G1PQ6ZSU1 146 aa14.46□□□□□ -0.09
SQSTM1-216ENST00000626660 OR5C1Q8NGR4 320 aa14.46□□□□□ -0.09
SQSTM1-216ENST00000626660 OR2T35Q8NGX2 323 aa14.46□□□□□ -0.09
SQSTM1-216ENST00000626660 RNF125Q96EQ8 232 aa14.46□□□□□ -0.09
SQSTM1-216ENST00000626660 PBDC1Q9BVG4 233 aa14.46□□□□□ -0.09
SQSTM1-216ENST00000626660 RHPN1-AS1Q9BWJ2 59 aa14.46□□□□□ -0.09
SQSTM1-216ENST00000626660 MLXQ9UH92 298 aa14.46□□□□□ -0.09
SQSTM1-216ENST00000626660 PFDN2Q9UHV9 154 aa14.46□□□□□ -0.09
SQSTM1-216ENST00000626660 IGHV3-49A0A0A0MS15 119 aa14.45□□□□□ -0.1
SQSTM1-216ENST00000626660 WI2-2373I1.2A0A1W2PRP0 233 aa14.45□□□□□ -0.1
SQSTM1-216ENST00000626660 HNRNPCP07910 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
SQSTM1-216ENST00000626660 LYZP61626 148 aa14.45□□□□□ -0.1
SQSTM1-216ENST00000626660 VWC2Q2TAL6 325 aa14.45□□□□□ -0.1
SQSTM1-216ENST00000626660 LAMTOR1Q6IAA8 161 aa14.45□□□□□ -0.1
SQSTM1-216ENST00000626660 RABAC1Q9UI14 185 aa14.45□□□□□ -0.1
SQSTM1-216ENST00000626660 HSPB11Q9Y547 144 aa14.45□□□□□ -0.1
SQSTM1-216ENST00000626660 UBE2L5PA0A1B0GUS4 154 aa14.44□□□□□ -0.1
SQSTM1-216ENST00000626660 CHEK1O14757 476 aa14.44□□□□□ -0.1
SQSTM1-216ENST00000626660 CRYBB3P26998 211 aa14.44□□□□□ -0.1
SQSTM1-216ENST00000626660 USF2Q15853 346 aaPredicted RBP14.44□□□□□ -0.1
SQSTM1-216ENST00000626660 RBPMS2Q6ZRY4 209 aaKnown RBP14.44□□□□□ -0.1
SQSTM1-216ENST00000626660 GRAMD2BQ96HH9 432 aa14.44□□□□□ -0.1
SQSTM1-216ENST00000626660 LSM4Q9Y4Z0 139 aaKnown RBP14.44□□□□□ -0.1
SQSTM1-216ENST00000626660 IGHV3OR16-13A0A075B7E8 117 aa14.43□□□□□ -0.1
SQSTM1-216ENST00000626660 IGHV3-74A0A0B4J1X5 117 aa14.43□□□□□ -0.1
SQSTM1-216ENST00000626660 TRAV25A0A0B4J276 109 aa14.43□□□□□ -0.1
SQSTM1-216ENST00000626660 GP9P14770 177 aa14.43□□□□□ -0.1
SQSTM1-216ENST00000626660 EIF2B2P49770 351 aaKnown RBP14.43□□□□□ -0.1
SQSTM1-216ENST00000626660 CLINT1Q14677 625 aa14.43□□□□□ -0.1
SQSTM1-216ENST00000626660 ZNF546Q86UE3 836 aa14.43□□□□□ -0.1
SQSTM1-216ENST00000626660 CHAC2Q8WUX2 184 aa14.43□□□□□ -0.1
SQSTM1-216ENST00000626660 WDR83OSQ9Y284 106 aa14.43□□□□□ -0.1
SQSTM1-216ENST00000626660 SELENOKQ9Y6D0 94 aa14.43□□□□□ -0.1
SQSTM1-216ENST00000626660 FXYD6-FXYD2A0A087WZ82 144 aa14.42□□□□□ -0.1
SQSTM1-216ENST00000626660 IZUMO1RA6ND01 250 aa14.42□□□□□ -0.1
SQSTM1-216ENST00000626660 AGPAT2O15120 278 aa14.42□□□□□ -0.1
SQSTM1-216ENST00000626660 PRB2P02812 416 aaPredicted RBP14.42□□□□□ -0.1
SQSTM1-216ENST00000626660 CD5P06127 495 aa14.42□□□□□ -0.1
SQSTM1-216ENST00000626660 GATA2P23769 480 aaPredicted RBP14.42□□□□□ -0.1
SQSTM1-216ENST00000626660 S100A7P31151 101 aa14.42□□□□□ -0.1
SQSTM1-216ENST00000626660 CAMLGP49069 296 aa14.42□□□□□ -0.1
SQSTM1-216ENST00000626660 GUCA2BQ16661 112 aa14.42□□□□□ -0.1
SQSTM1-216ENST00000626660 Q5BKY6 102 aa14.42□□□□□ -0.1
SQSTM1-216ENST00000626660 TMEM61Q8N0U2 210 aa14.42□□□□□ -0.1
SQSTM1-216ENST00000626660 ST8SIA2Q92186 375 aa14.42□□□□□ -0.1
SQSTM1-216ENST00000626660 PRR25Q96S07 402 aa14.42□□□□□ -0.1
SQSTM1-216ENST00000626660 VSIRQ9H7M9 311 aa14.42□□□□□ -0.1
SQSTM1-216ENST00000626660 AURKAIP1Q9NWT8 199 aaPredicted RBP14.42□□□□□ -0.1
SQSTM1-216ENST00000626660 IGHV3-66A0A0C4DH42 116 aa14.41□□□□□ -0.1
SQSTM1-216ENST00000626660 MPDU1O75352 247 aa14.41□□□□□ -0.1
SQSTM1-216ENST00000626660 DFFBO76075 338 aa14.41□□□□□ -0.1
SQSTM1-216ENST00000626660 APOHP02749 345 aaPredicted RBP14.41□□□□□ -0.1
SQSTM1-216ENST00000626660 LINC00869P0C866 280 aa14.41□□□□□ -0.1
SQSTM1-216ENST00000626660 FGF7P21781 194 aa14.41□□□□□ -0.1
SQSTM1-216ENST00000626660 INO80EQ8NBZ0 244 aaPredicted RBP14.41□□□□□ -0.1
SQSTM1-216ENST00000626660 PPP1R14BQ96C90 147 aa14.41□□□□□ -0.1
SQSTM1-216ENST00000626660 RNF2Q99496 336 aa14.41□□□□□ -0.1
SQSTM1-216ENST00000626660 MGST2Q99735 147 aa14.41□□□□□ -0.1
SQSTM1-216ENST00000626660 ATP5SQ99766 215 aa14.41□□□□□ -0.1
SQSTM1-216ENST00000626660 ORM2P19652 201 aa14.4□□□□□ -0.1
SQSTM1-216ENST00000626660 TMEM182Q6ZP80 229 aaPredicted RBP14.4□□□□□ -0.1
SQSTM1-216ENST00000626660 S100A7AQ86SG5 101 aa14.4□□□□□ -0.1
SQSTM1-216ENST00000626660 OR1B1Q8NGR6 318 aa14.4□□□□□ -0.1
SQSTM1-216ENST00000626660 AQP10Q96PS8 301 aa14.4□□□□□ -0.1
SQSTM1-216ENST00000626660 SLC45A2Q9UMX9 530 aa14.4□□□□□ -0.1
SQSTM1-216ENST00000626660 U3KQE9 123 aa14.4□□□□□ -0.1
SQSTM1-216ENST00000626660 TSPAN4O14817 238 aa14.39□□□□□ -0.11
SQSTM1-216ENST00000626660 IFNA5P01569 189 aa14.39□□□□□ -0.11
SQSTM1-216ENST00000626660 PXDC1Q5TGL8 231 aa14.39□□□□□ -0.11
SQSTM1-216ENST00000626660 TCF24Q7RTU0 167 aa14.39□□□□□ -0.11
SQSTM1-216ENST00000626660 GTSCR1Q86UQ5 136 aa14.39□□□□□ -0.11
SQSTM1-216ENST00000626660 SMIM3Q9BZL3 60 aa14.39□□□□□ -0.11
SQSTM1-216ENST00000626660 hCG_2014768A0A024R1R8 64 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms