RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 GGTLC1Q9BX51 225 aa9.68□□□□□ -0.86
PNKP-217ENST00000625216 NPCDR1Q9BY65 106 aa9.68□□□□□ -0.86
PNKP-217ENST00000625216 OR2J3O76001 311 aa9.67□□□□□ -0.86
PNKP-217ENST00000625216 NDUFB8O95169 186 aa9.67□□□□□ -0.86
PNKP-217ENST00000625216 RND2P52198 227 aa9.67□□□□□ -0.86
PNKP-217ENST00000625216 ZNF343Q6P1L6 599 aa9.67□□□□□ -0.86
PNKP-217ENST00000625216 TMEM182Q6ZP80 229 aaPredicted RBP9.67□□□□□ -0.86
PNKP-217ENST00000625216 GNPNAT1Q96EK6 184 aaPredicted RBP9.67□□□□□ -0.86
PNKP-217ENST00000625216 ACY3Q96HD9 319 aa9.67□□□□□ -0.86
PNKP-217ENST00000625216 PSMG3Q9BT73 122 aaPredicted RBP9.67□□□□□ -0.86
PNKP-217ENST00000625216 NPVFQ9HCQ7 196 aa9.67□□□□□ -0.86
PNKP-217ENST00000625216 PEF1Q9UBV8 284 aaKnown RBP9.67□□□□□ -0.86
PNKP-217ENST00000625216 TIMM9Q9Y5J7 89 aa9.67□□□□□ -0.86
PNKP-217ENST00000625216 IGKV1D-37A0A075B6S9 117 aa9.66□□□□□ -0.86
PNKP-217ENST00000625216 TRBV9A0A0B4J1U6 114 aa9.66□□□□□ -0.86
PNKP-217ENST00000625216 MFSD2BA6NFX1 497 aa9.66□□□□□ -0.86
PNKP-217ENST00000625216 FAM223BA6NKX1 122 aa9.66□□□□□ -0.86
PNKP-217ENST00000625216 SULT1A2P50226 295 aa9.66□□□□□ -0.86
PNKP-217ENST00000625216 KLF5Q13887 457 aaPredicted RBP9.66□□□□□ -0.86
PNKP-217ENST00000625216 FAM209BQ5JX69 171 aa9.66□□□□□ -0.86
PNKP-217ENST00000625216 ETFRF1Q6IPR1 90 aa9.66□□□□□ -0.86
PNKP-217ENST00000625216 FAM223AQ8IWN6 122 aa9.66□□□□□ -0.86
PNKP-217ENST00000625216 THAP8Q8NA92 274 aa9.66□□□□□ -0.86
PNKP-217ENST00000625216 OR2G3Q8NGZ4 309 aa9.66□□□□□ -0.86
PNKP-217ENST00000625216 NPIPB3Q92617 1050 aa9.66□□□□□ -0.86
PNKP-217ENST00000625216 SMAD5-AS1Q9Y6J3 95 aa9.66□□□□□ -0.86
PNKP-217ENST00000625216 S4R3C0 116 aa9.66□□□□□ -0.86
PNKP-217ENST00000625216 ANKRD34BA5PLL1 514 aa9.65□□□□□ -0.86
PNKP-217ENST00000625216 F8W735 103 aaPredicted RBP9.65□□□□□ -0.86
PNKP-217ENST00000625216 AGPAT2O15120 278 aa9.65□□□□□ -0.86
PNKP-217ENST00000625216 MPDU1O75352 247 aa9.65□□□□□ -0.86
PNKP-217ENST00000625216 NMBP08949 121 aa9.65□□□□□ -0.86
PNKP-217ENST00000625216 HIST1H1BP16401 226 aaKnown RBP9.65□□□□□ -0.86
PNKP-217ENST00000625216 OR10J1P30954 320 aa9.65□□□□□ -0.86
PNKP-217ENST00000625216 RHOGP84095 191 aa9.65□□□□□ -0.86
PNKP-217ENST00000625216 EIF5AL1Q6IS14 154 aaKnown RBP9.65□□□□□ -0.86
PNKP-217ENST00000625216 TEPPQ6URK8 271 aa9.65□□□□□ -0.86
PNKP-217ENST00000625216 TMEM116Q8NCL8 245 aa9.65□□□□□ -0.86
PNKP-217ENST00000625216 VSIRQ9H7M9 311 aa9.65□□□□□ -0.86
PNKP-217ENST00000625216 FBXL7Q9UJT9 491 aa9.65□□□□□ -0.86
PNKP-217ENST00000625216 CAMLGP49069 296 aa9.64□□□□□ -0.87
PNKP-217ENST00000625216 ELLP55199 621 aaPredicted RBP9.64□□□□□ -0.87
PNKP-217ENST00000625216 ATP5G2Q06055 141 aa9.64□□□□□ -0.87
PNKP-217ENST00000625216 MIC13Q5XKP0 118 aa9.64□□□□□ -0.87
PNKP-217ENST00000625216 NECAP1Q8NC96 275 aa9.64□□□□□ -0.87
PNKP-217ENST00000625216 OR4X1Q8NH49 305 aa9.64□□□□□ -0.87
PNKP-217ENST00000625216 SIGLEC8Q9NYZ4 499 aa9.64□□□□□ -0.87
PNKP-217ENST00000625216 PXMP4Q9Y6I8 212 aa9.64□□□□□ -0.87
PNKP-217ENST00000625216 COL7A1Q02388 2944 aa9.63□□□□□ -0.87
PNKP-217ENST00000625216 C17orf112F2Z3M2 114 aa9.63□□□□□ -0.87
PNKP-217ENST00000625216 CYB5BO43169 146 aa9.63□□□□□ -0.87
PNKP-217ENST00000625216 YIF1AO95070 293 aa9.63□□□□□ -0.87
PNKP-217ENST00000625216 IGLV1-51P01701 117 aa9.63□□□□□ -0.87
PNKP-217ENST00000625216 IGHV3-23P01764 117 aa9.63□□□□□ -0.87
PNKP-217ENST00000625216 GP9P14770 177 aa9.63□□□□□ -0.87
PNKP-217ENST00000625216 RAB2AP61019 212 aa9.63□□□□□ -0.87
PNKP-217ENST00000625216 PRR20EP86478 221 aa9.63□□□□□ -0.87
PNKP-217ENST00000625216 PRR20CP86479 221 aa9.63□□□□□ -0.87
PNKP-217ENST00000625216 PRR20DP86480 221 aa9.63□□□□□ -0.87
PNKP-217ENST00000625216 PRR20BP86481 221 aa9.63□□□□□ -0.87
PNKP-217ENST00000625216 PRR20AP86496 221 aa9.63□□□□□ -0.87
PNKP-217ENST00000625216 FFAR4Q5NUL3 377 aa9.63□□□□□ -0.87
PNKP-217ENST00000625216 CYP2G1PQ6ZSU1 146 aa9.63□□□□□ -0.87
PNKP-217ENST00000625216 STPG3Q8N7X2 389 aa9.63□□□□□ -0.87
PNKP-217ENST00000625216 OR9G4Q8NGQ1 327 aa9.63□□□□□ -0.87
PNKP-217ENST00000625216 CXorf58Q96LI9 332 aa9.63□□□□□ -0.87
PNKP-217ENST00000625216 WWC2-AS2Q96NR7 200 aa9.63□□□□□ -0.87
PNKP-217ENST00000625216 THYN1Q9P016 225 aa9.63□□□□□ -0.87
PNKP-217ENST00000625216 SLC45A2Q9UMX9 530 aa9.63□□□□□ -0.87
PNKP-217ENST00000625216 SORL1Q92673 2214 aa9.63□□□□□ -0.87
PNKP-217ENST00000625216 ZFP92A6NM28 416 aa9.62□□□□□ -0.87
PNKP-217ENST00000625216 CLN5O75503 358 aa9.62□□□□□ -0.87
PNKP-217ENST00000625216 LINC00869P0C866 280 aa9.62□□□□□ -0.87
PNKP-217ENST00000625216 IGLC1P0CG04 106 aa9.62□□□□□ -0.87
PNKP-217ENST00000625216 GATA2P23769 480 aaPredicted RBP9.62□□□□□ -0.87
PNKP-217ENST00000625216 RPL29P47914 159 aaKnown RBP9.62□□□□□ -0.87
PNKP-217ENST00000625216 FHITP49789 147 aa9.62□□□□□ -0.87
PNKP-217ENST00000625216 SYNJ2BPP57105 145 aa9.62□□□□□ -0.87
PNKP-217ENST00000625216 B2MP61769 119 aa9.62□□□□□ -0.87
PNKP-217ENST00000625216 ZNF90Q03938 601 aa9.62□□□□□ -0.87
PNKP-217ENST00000625216 RPEL1Q2QD12 228 aa9.62□□□□□ -0.87
PNKP-217ENST00000625216 C15orf32Q32M92 178 aa9.62□□□□□ -0.87
PNKP-217ENST00000625216 TIGITQ495A1 244 aa9.62□□□□□ -0.87
PNKP-217ENST00000625216 CLLU1Q5K131 121 aa9.62□□□□□ -0.87
PNKP-217ENST00000625216 AKR1C8PQ5T2L2 129 aa9.62□□□□□ -0.87
PNKP-217ENST00000625216 Q6ZRG5 221 aa9.62□□□□□ -0.87
PNKP-217ENST00000625216 ZNF709Q8N972 641 aa9.62□□□□□ -0.87
PNKP-217ENST00000625216 ZNF502Q8TBZ5 544 aa9.62□□□□□ -0.87
PNKP-217ENST00000625216 VN1R17PQ8TDU5 208 aa9.62□□□□□ -0.87
PNKP-217ENST00000625216 RNF141Q8WVD5 230 aa9.62□□□□□ -0.87
PNKP-217ENST00000625216 CCDC140Q96MF4 163 aa9.62□□□□□ -0.87
PNKP-217ENST00000625216 TRGV9Q99603 122 aa9.62□□□□□ -0.87
PNKP-217ENST00000625216 C21orf62Q9NYP8 219 aa9.62□□□□□ -0.87
PNKP-217ENST00000625216 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.61□□□□□ -0.87
PNKP-217ENST00000625216 ZNF705EA8MWA4 302 aaPredicted RBP9.61□□□□□ -0.87
PNKP-217ENST00000625216 UMAD1C9J7I0 102 aa9.61□□□□□ -0.87
PNKP-217ENST00000625216 IGKV1-17P01599 117 aa9.61□□□□□ -0.87
PNKP-217ENST00000625216 MFAP4P55083 255 aa9.61□□□□□ -0.87
PNKP-217ENST00000625216 SERF2P84101 59 aa9.61□□□□□ -0.87
PNKP-217ENST00000625216 ZNF726P1Q15940 193 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms