RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 TMEM238LA0A1B0GVL6 79 aa13.24□□□□□ -0.29
GABRB3-215ENST00000622697 A6NJY4 79 aa13.24□□□□□ -0.29
GABRB3-215ENST00000622697 TMEM178BH3BS89 294 aa13.24□□□□□ -0.29
GABRB3-215ENST00000622697 LY6HO94772 140 aa13.24□□□□□ -0.29
GABRB3-215ENST00000622697 PSG1P11464 419 aa13.24□□□□□ -0.29
GABRB3-215ENST00000622697 PAX9P55771 341 aa13.24□□□□□ -0.29
GABRB3-215ENST00000622697 LYPD2Q6UXB3 125 aa13.23□□□□□ -0.29
GABRB3-215ENST00000622697 LINC00469Q8N7U9 141 aa13.23□□□□□ -0.29
GABRB3-215ENST00000622697 ZNF257Q9Y2Q1 563 aa13.23□□□□□ -0.29
GABRB3-215ENST00000622697 LINC00614P0C842 121 aa13.23□□□□□ -0.29
GABRB3-215ENST00000622697 SOX21Q9Y651 276 aaPredicted RBP13.23□□□□□ -0.29
GABRB3-215ENST00000622697 LGALS3P17931 250 aaKnown RBP13.23□□□□□ -0.29
GABRB3-215ENST00000622697 RPRMLQ8N4K4 120 aa13.23□□□□□ -0.29
GABRB3-215ENST00000622697 C8orf46Q8TAG6 207 aa13.23□□□□□ -0.29
GABRB3-215ENST00000622697 LINC00479Q96M42 142 aa13.23□□□□□ -0.29
GABRB3-215ENST00000622697 KIR2DL4Q99706 377 aa13.23□□□□□ -0.29
GABRB3-215ENST00000622697 A0A0G2JNJ9 132 aa13.23□□□□□ -0.29
GABRB3-215ENST00000622697 FOXL1Q12952 345 aa13.23□□□□□ -0.29
GABRB3-215ENST00000622697 NEUROG1Q92886 237 aa13.23□□□□□ -0.29
GABRB3-215ENST00000622697 C7orf69Q9H7B7 122 aa13.23□□□□□ -0.29
GABRB3-215ENST00000622697 Q9UFV3 132 aa13.23□□□□□ -0.29
GABRB3-215ENST00000622697 RHOGP84095 191 aa13.23□□□□□ -0.29
GABRB3-215ENST00000622697 ZNF672Q499Z4 452 aaPredicted RBP13.23□□□□□ -0.29
GABRB3-215ENST00000622697 TMEM170BQ5T4T1 132 aa13.23□□□□□ -0.29
GABRB3-215ENST00000622697 TSKUQ8WUA8 353 aa13.23□□□□□ -0.29
GABRB3-215ENST00000622697 PCNX1Q96RV3 2341 aa13.22□□□□□ -0.29
GABRB3-215ENST00000622697 EVI2AP22794 236 aa13.22□□□□□ -0.29
GABRB3-215ENST00000622697 WDR86Q86TI4 376 aa13.22□□□□□ -0.29
GABRB3-215ENST00000622697 NPIPB5A8MRT5 1133 aa13.22□□□□□ -0.29
GABRB3-215ENST00000622697 H0YJW9 148 aa13.22□□□□□ -0.29
GABRB3-215ENST00000622697 NDUFA3O95167 84 aa13.22□□□□□ -0.29
GABRB3-215ENST00000622697 WNT2P09544 360 aa13.22□□□□□ -0.29
GABRB3-215ENST00000622697 LEPP41159 167 aa13.22□□□□□ -0.29
GABRB3-215ENST00000622697 PRSS8Q16651 343 aa13.22□□□□□ -0.29
GABRB3-215ENST00000622697 ASIPP42127 132 aa13.22□□□□□ -0.29
GABRB3-215ENST00000622697 LY6DQ14210 128 aa13.22□□□□□ -0.29
GABRB3-215ENST00000622697 WFDC12Q8WWY7 111 aa13.22□□□□□ -0.29
GABRB3-215ENST00000622697 ACTL10Q5JWF8 245 aa13.22□□□□□ -0.29
GABRB3-215ENST00000622697 SMIM12Q96EX1 92 aa13.22□□□□□ -0.29
GABRB3-215ENST00000622697 IGKV3OR2-268A0A0C4DH90 116 aa13.21□□□□□ -0.29
GABRB3-215ENST00000622697 OR11H12B2RN74 326 aa13.21□□□□□ -0.29
GABRB3-215ENST00000622697 RPL15P61313 204 aaKnown RBP13.21□□□□□ -0.29
GABRB3-215ENST00000622697 SNRPD3P62318 126 aaKnown RBP13.21□□□□□ -0.29
GABRB3-215ENST00000622697 OR11H1Q8NG94 326 aa13.21□□□□□ -0.29
GABRB3-215ENST00000622697 OR11H2Q8NH07 326 aa13.21□□□□□ -0.29
GABRB3-215ENST00000622697 RNF166Q96A37 237 aaPredicted RBP13.21□□□□□ -0.29
GABRB3-215ENST00000622697 IGKV1-39P01597 117 aa13.21□□□□□ -0.29
GABRB3-215ENST00000622697 IGKV1D-39P04432 117 aa13.21□□□□□ -0.29
GABRB3-215ENST00000622697 FBLN7Q53RD9 439 aa13.21□□□□□ -0.29
GABRB3-215ENST00000622697 TRAV8-1A0A0A6YYK1 113 aa13.21□□□□□ -0.29
GABRB3-215ENST00000622697 A0A1B0GUS0 222 aa13.21□□□□□ -0.29
GABRB3-215ENST00000622697 PVRIGQ6DKI7 326 aa13.21□□□□□ -0.29
GABRB3-215ENST00000622697 FAM168AQ92567 244 aa13.21□□□□□ -0.29
GABRB3-215ENST00000622697 BEX4Q9NWD9 120 aaPredicted RBP13.21□□□□□ -0.29
GABRB3-215ENST00000622697 IGKV2-40A0A087WW87 121 aaPredicted RBP13.21□□□□□ -0.3
GABRB3-215ENST00000622697 NPIPB6E9PJ23 425 aa13.21□□□□□ -0.3
GABRB3-215ENST00000622697 IGKV2D-40P01614 121 aaPredicted RBP13.21□□□□□ -0.3
GABRB3-215ENST00000622697 SCGB3A1Q96QR1 104 aa13.21□□□□□ -0.3
GABRB3-215ENST00000622697 YLPM1P49750 1951 aaKnown RBP13.21□□□□□ -0.3
GABRB3-215ENST00000622697 WNK2Q9Y3S1 2297 aa13.21□□□□□ -0.3
GABRB3-215ENST00000622697 CACNA1HO95180 2353 aa13.21□□□□□ -0.3
GABRB3-215ENST00000622697 IGHV1-3A0A0C4DH29 117 aa13.21□□□□□ -0.3
GABRB3-215ENST00000622697 CEACAM4O75871 244 aa13.21□□□□□ -0.3
GABRB3-215ENST00000622697 SMIM13P0DJ93 91 aa13.21□□□□□ -0.3
GABRB3-215ENST00000622697 CSRP1P21291 193 aaKnown RBP13.21□□□□□ -0.3
GABRB3-215ENST00000622697 MBNL3Q9NUK0 354 aaKnown RBP13.21□□□□□ -0.3
GABRB3-215ENST00000622697 PCP4P48539 62 aa13.2□□□□□ -0.3
GABRB3-215ENST00000622697 FXYD7P58549 80 aa13.2□□□□□ -0.3
GABRB3-215ENST00000622697 OR10J3Q5JRS4 329 aa13.2□□□□□ -0.3
GABRB3-215ENST00000622697 DUX4L9Q6RFH8 374 aaPredicted RBP13.2□□□□□ -0.3
GABRB3-215ENST00000622697 SLC25A48Q6ZT89 311 aaKnown RBP13.2□□□□□ -0.3
GABRB3-215ENST00000622697 PLXNB3Q9ULL4 1909 aa13.2□□□□□ -0.3
GABRB3-215ENST00000622697 FABP5P3A8MUU1 101 aa13.2□□□□□ -0.3
GABRB3-215ENST00000622697 THBDP07204 575 aa13.2□□□□□ -0.3
GABRB3-215ENST00000622697 AMMECR1LQ6DCA0 310 aa13.2□□□□□ -0.3
GABRB3-215ENST00000622697 DMRTC2Q8IXT2 367 aaPredicted RBP13.2□□□□□ -0.3
GABRB3-215ENST00000622697 PEF1Q9UBV8 284 aaKnown RBP13.2□□□□□ -0.3
GABRB3-215ENST00000622697 LCN12Q6JVE5 192 aa13.2□□□□□ -0.3
GABRB3-215ENST00000622697 SRD5A1P18405 259 aa13.2□□□□□ -0.3
GABRB3-215ENST00000622697 AREGP15514 252 aa13.19□□□□□ -0.3
GABRB3-215ENST00000622697 USF3Q68DE3 2245 aa13.19□□□□□ -0.3
GABRB3-215ENST00000622697 TANC1Q9C0D5 1861 aa13.19□□□□□ -0.3
GABRB3-215ENST00000622697 CADP27708 2225 aa13.19□□□□□ -0.3
GABRB3-215ENST00000622697 ZNF726P1Q15940 193 aa13.19□□□□□ -0.3
GABRB3-215ENST00000622697 Q6AWC8 147 aa13.19□□□□□ -0.3
GABRB3-215ENST00000622697 IGFL4Q6B9Z1 124 aa13.19□□□□□ -0.3
GABRB3-215ENST00000622697 Q6ZR03 302 aa13.19□□□□□ -0.3
GABRB3-215ENST00000622697 SLC25A39Q9BZJ4 359 aaPredicted RBP13.19□□□□□ -0.3
GABRB3-215ENST00000622697 DOCK10Q96BY6 2186 aa13.19□□□□□ -0.3
GABRB3-215ENST00000622697 TRAV9-2A0A087WT02 112 aa13.19□□□□□ -0.3
GABRB3-215ENST00000622697 IGHG3P01860 377 aa13.19□□□□□ -0.3
GABRB3-215ENST00000622697 DOCK11Q5JSL3 2073 aa13.19□□□□□ -0.3
GABRB3-215ENST00000622697 NDUFS6O75380 124 aaKnown RBP13.19□□□□□ -0.3
GABRB3-215ENST00000622697 VKORC1Q9BQB6 163 aa13.19□□□□□ -0.3
GABRB3-215ENST00000622697 MBD3L4A6NDZ8 208 aaPredicted RBP13.18□□□□□ -0.3
GABRB3-215ENST00000622697 MBD3L3A6NE82 208 aaPredicted RBP13.18□□□□□ -0.3
GABRB3-215ENST00000622697 MBD3L5A6NJ08 208 aaPredicted RBP13.18□□□□□ -0.3
GABRB3-215ENST00000622697 RRN3P1Q2M238 152 aa13.18□□□□□ -0.3
GABRB3-215ENST00000622697 MBD3L2Q8NHZ7 208 aaPredicted RBP13.18□□□□□ -0.3
GABRB3-215ENST00000622697 SMAD7O15105 426 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms