RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 ACTL10Q5JWF8 245 aa10.48□□□□□ -0.73
MSH6-215ENST00000622629 RNASE2P10153 161 aaKnown RBP10.48□□□□□ -0.73
MSH6-215ENST00000622629 SPRNQ5BIV9 151 aa10.48□□□□□ -0.73
MSH6-215ENST00000622629 HSPB8Q9UJY1 196 aa10.48□□□□□ -0.73
MSH6-215ENST00000622629 EPDR1Q9UM22 224 aa10.48□□□□□ -0.73
MSH6-215ENST00000622629 ATRXP46100 2492 aa10.48□□□□□ -0.73
MSH6-215ENST00000622629 TRAV9-1A0A075B6T8 112 aa10.48□□□□□ -0.73
MSH6-215ENST00000622629 IGHV3-49A0A0A0MS15 119 aa10.48□□□□□ -0.73
MSH6-215ENST00000622629 IZUMO1RA6ND01 250 aa10.48□□□□□ -0.73
MSH6-215ENST00000622629 LY6HO94772 140 aa10.47□□□□□ -0.73
MSH6-215ENST00000622629 PMCHL1Q16048 86 aa10.47□□□□□ -0.73
MSH6-215ENST00000622629 PIP4P1Q86T03 277 aa10.47□□□□□ -0.73
MSH6-215ENST00000622629 TWIST1Q15672 202 aa10.47□□□□□ -0.73
MSH6-215ENST00000622629 CDPF1Q6NVV7 123 aa10.47□□□□□ -0.73
MSH6-215ENST00000622629 TMEM14BQ9NUH8 114 aa10.47□□□□□ -0.73
MSH6-215ENST00000622629 FAM215AQ9Y5M1 114 aa10.47□□□□□ -0.73
MSH6-215ENST00000622629 KLF2Q9Y5W3 355 aaPredicted RBP10.47□□□□□ -0.73
MSH6-215ENST00000622629 IGHV1-8P0DP01 117 aa10.47□□□□□ -0.73
MSH6-215ENST00000622629 ZNF664Q8N3J9 261 aa10.47□□□□□ -0.73
MSH6-215ENST00000622629 TCF21O43680 179 aa10.47□□□□□ -0.73
MSH6-215ENST00000622629 FAM169BQ8N8A8 192 aa10.47□□□□□ -0.73
MSH6-215ENST00000622629 TIMM23O14925 209 aa10.46□□□□□ -0.73
MSH6-215ENST00000622629 IGLV2-14P01704 120 aa10.46□□□□□ -0.73
MSH6-215ENST00000622629 FAM106CPP0CH98 169 aa10.46□□□□□ -0.73
MSH6-215ENST00000622629 C19orf35Q6ZS72 473 aa10.46□□□□□ -0.73
MSH6-215ENST00000622629 RPP21Q9H633 154 aaKnown RBP10.46□□□□□ -0.73
MSH6-215ENST00000622629 IGHV3OR16-10A0A075B7F0 116 aa10.46□□□□□ -0.74
MSH6-215ENST00000622629 IFITM10A6NMD0 228 aa10.46□□□□□ -0.74
MSH6-215ENST00000622629 C9JCJ5 164 aa10.46□□□□□ -0.74
MSH6-215ENST00000622629 TMEM167AQ8TBQ9 72 aa10.46□□□□□ -0.74
MSH6-215ENST00000622629 ST6GALNAC6Q969X2 333 aa10.46□□□□□ -0.74
MSH6-215ENST00000622629 CKS2P33552 79 aa10.46□□□□□ -0.74
MSH6-215ENST00000622629 LOXL3P58215 753 aa10.46□□□□□ -0.74
MSH6-215ENST00000622629 RPL7P18124 248 aaKnown RBP10.45□□□□□ -0.74
MSH6-215ENST00000622629 LY6DQ14210 128 aa10.45□□□□□ -0.74
MSH6-215ENST00000622629 TEX45Q8NA69 505 aa10.45□□□□□ -0.74
MSH6-215ENST00000622629 NUDT10Q8NFP7 164 aa10.45□□□□□ -0.74
MSH6-215ENST00000622629 NUDT11Q96G61 164 aa10.45□□□□□ -0.74
MSH6-215ENST00000622629 GNB1LQ9BYB4 327 aa10.45□□□□□ -0.74
MSH6-215ENST00000622629 CHD8Q9HCK8 2581 aa10.45□□□□□ -0.74
MSH6-215ENST00000622629 PRSS8Q16651 343 aa10.45□□□□□ -0.74
MSH6-215ENST00000622629 KLF17Q5JT82 389 aaPredicted RBP10.45□□□□□ -0.74
MSH6-215ENST00000622629 C11orf1Q9H5F2 150 aa10.45□□□□□ -0.74
MSH6-215ENST00000622629 IGHV2-26A0A0B4J1V2 119 aa10.45□□□□□ -0.74
MSH6-215ENST00000622629 IGHV3-66A0A0C4DH42 116 aa10.45□□□□□ -0.74
MSH6-215ENST00000622629 SRRM4A7MD48 611 aaKnown RBP10.45□□□□□ -0.74
MSH6-215ENST00000622629 PRR30Q53SZ7 412 aaPredicted RBP10.45□□□□□ -0.74
MSH6-215ENST00000622629 ST6GALNAC3Q8NDV1 305 aa10.45□□□□□ -0.74
MSH6-215ENST00000622629 KCNS1Q96KK3 526 aa10.45□□□□□ -0.74
MSH6-215ENST00000622629 IGHV2-70P01814 119 aa10.44□□□□□ -0.74
MSH6-215ENST00000622629 CHD3Q12873 2000 aaKnown RBP10.44□□□□□ -0.74
MSH6-215ENST00000622629 ZNF324O75467 553 aaPredicted RBP10.44□□□□□ -0.74
MSH6-215ENST00000622629 CFHR2P36980 270 aa10.44□□□□□ -0.74
MSH6-215ENST00000622629 DKK4Q9UBT3 224 aa10.44□□□□□ -0.74
MSH6-215ENST00000622629 TRAV8-1A0A0A6YYK1 113 aa10.44□□□□□ -0.74
MSH6-215ENST00000622629 PSG1P11464 419 aa10.44□□□□□ -0.74
MSH6-215ENST00000622629 CDKN1AP38936 164 aa10.44□□□□□ -0.74
MSH6-215ENST00000622629 ODF3L1Q8IXM7 274 aa10.44□□□□□ -0.74
MSH6-215ENST00000622629 C5orf30Q96GV9 206 aa10.44□□□□□ -0.74
MSH6-215ENST00000622629 AP5S1Q9NUS5 200 aa10.44□□□□□ -0.74
MSH6-215ENST00000622629 C21orf62Q9NYP8 219 aa10.44□□□□□ -0.74
MSH6-215ENST00000622629 CDC42EP3Q9UKI2 254 aa10.44□□□□□ -0.74
MSH6-215ENST00000622629 TRAV30A0A087WSZ9 112 aa10.44□□□□□ -0.74
MSH6-215ENST00000622629 K7EM74 188 aa10.44□□□□□ -0.74
MSH6-215ENST00000622629 ZNF207O43670 478 aaKnown RBP10.44□□□□□ -0.74
MSH6-215ENST00000622629 BTF3P20290 206 aaKnown RBP10.44□□□□□ -0.74
MSH6-215ENST00000622629 ZNF672Q499Z4 452 aaPredicted RBP10.44□□□□□ -0.74
MSH6-215ENST00000622629 ASPHD1Q5U4P2 390 aa10.44□□□□□ -0.74
MSH6-215ENST00000622629 EXOC3-AS1Q8N2X6 119 aa10.44□□□□□ -0.74
MSH6-215ENST00000622629 SVIPQ8NHG7 77 aa10.44□□□□□ -0.74
MSH6-215ENST00000622629 TMEM70Q9BUB7 260 aa10.44□□□□□ -0.74
MSH6-215ENST00000622629 RABAC1Q9UI14 185 aa10.44□□□□□ -0.74
MSH6-215ENST00000622629 A0A1B0GUT8 65 aa10.43□□□□□ -0.74
MSH6-215ENST00000622629 SIAH2O43255 324 aa10.43□□□□□ -0.74
MSH6-215ENST00000622629 DIAPH2-AS1Q14236 149 aa10.43□□□□□ -0.74
MSH6-215ENST00000622629 SCRT1Q9BWW7 348 aa10.43□□□□□ -0.74
MSH6-215ENST00000622629 CSPG4Q6UVK1 2322 aa10.43□□□□□ -0.74
MSH6-215ENST00000622629 ITGB1BP1O14713 200 aa10.43□□□□□ -0.74
MSH6-215ENST00000622629 NBR2O15453 112 aa10.43□□□□□ -0.74
MSH6-215ENST00000622629 HLA-DRB1P01911 266 aa10.43□□□□□ -0.74
MSH6-215ENST00000622629 SMIM17P0DL12 118 aa10.43□□□□□ -0.74
MSH6-215ENST00000622629 SPANXN1Q5VSR9 72 aa10.43□□□□□ -0.74
MSH6-215ENST00000622629 NUP37Q8NFH4 326 aa10.43□□□□□ -0.74
MSH6-215ENST00000622629 PMCHL2Q9BQD1 86 aa10.43□□□□□ -0.74
MSH6-215ENST00000622629 IGLV3-9A0A075B6K5 115 aa10.42□□□□□ -0.74
MSH6-215ENST00000622629 A0A1W2PPI3 338 aa10.42□□□□□ -0.74
MSH6-215ENST00000622629 F5H697 171 aa10.42□□□□□ -0.74
MSH6-215ENST00000622629 GATA4P43694 442 aa10.42□□□□□ -0.74
MSH6-215ENST00000622629 TMEM136Q6ZRR5 245 aa10.42□□□□□ -0.74
MSH6-215ENST00000622629 RBPMS2Q6ZRY4 209 aaKnown RBP10.42□□□□□ -0.74
MSH6-215ENST00000622629 IGHV1-3A0A0C4DH29 117 aa10.42□□□□□ -0.74
MSH6-215ENST00000622629 NMUP48645 174 aa10.42□□□□□ -0.74
MSH6-215ENST00000622629 FMC1Q96HJ9 113 aa10.42□□□□□ -0.74
MSH6-215ENST00000622629 FBXL7Q9UJT9 491 aa10.42□□□□□ -0.74
MSH6-215ENST00000622629 PMS2P5A8MQ11 134 aa10.42□□□□□ -0.74
MSH6-215ENST00000622629 E7EQL1 145 aa10.42□□□□□ -0.74
MSH6-215ENST00000622629 GPR183P32249 361 aa10.42□□□□□ -0.74
MSH6-215ENST00000622629 CX3CL1P78423 397 aa10.42□□□□□ -0.74
MSH6-215ENST00000622629 TMEM78Q5T7P6 136 aa10.42□□□□□ -0.74
MSH6-215ENST00000622629 CENPVQ7Z7K6 275 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms