RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 P0C879 139 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 OR13C7P0DN81 318 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 LGALS7P47929 136 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 SNRPEP62304 92 aaKnown RBP5.92□□□□□ -1.46
CLK1-215ENST00000621181 S100A12P80511 92 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 ARL16Q0P5N6 197 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 EIF4EBP1Q13541 118 aaPredicted RBP5.92□□□□□ -1.46
CLK1-215ENST00000621181 SOHLH1Q5JUK2 328 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 MOB1BQ7L9L4 216 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 MBD3L1Q8WWY6 194 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 ISOC2Q96AB3 205 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 RAB40CQ96S21 281 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 AGMATQ9BSE5 352 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 C20orf24Q9BUV8 137 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 PEMTQ9UBM1 199 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 PIGBOS1A0A0B4J2F0 54 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 M0R036 132 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 TRBV12-3P01733 135 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 APOA2P02652 100 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 AKR1D1P51857 326 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 B2MP61769 119 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 VAMP2P63027 116 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 IZUMO4Q1ZYL8 232 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 ZNF343Q6P1L6 599 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 LINC00322Q6ZN03 302 aaPredicted RBP5.92□□□□□ -1.46
CLK1-215ENST00000621181 OR2K2Q8NGT1 345 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 OR10J5Q8NHC4 309 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 USMG5Q96IX5 58 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 PARD6GQ9BYG4 376 aaPredicted RBP5.92□□□□□ -1.46
CLK1-215ENST00000621181 SRD5A3Q9H8P0 318 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 LOC102723971A0A1B0GUV8 181 aa5.91□□□□□ -1.46
CLK1-215ENST00000621181 A0A1B0GV50 99 aa5.91□□□□□ -1.46
CLK1-215ENST00000621181 OR11H12B2RN74 326 aa5.91□□□□□ -1.46
CLK1-215ENST00000621181 H3BQ15 152 aa5.91□□□□□ -1.46
CLK1-215ENST00000621181 DFFBO76075 338 aa5.91□□□□□ -1.46
CLK1-215ENST00000621181 CD7P09564 240 aa5.91□□□□□ -1.46
CLK1-215ENST00000621181 APELAP0DMC3 54 aa5.91□□□□□ -1.46
CLK1-215ENST00000621181 CEACAM6P40199 344 aa5.91□□□□□ -1.46
CLK1-215ENST00000621181 PMS2P11Q13670 270 aa5.91□□□□□ -1.46
CLK1-215ENST00000621181 ZNF726P1Q15940 193 aa5.91□□□□□ -1.46
CLK1-215ENST00000621181 CD300EQ496F6 205 aaPredicted RBP5.91□□□□□ -1.46
CLK1-215ENST00000621181 PDPNQ86YL7 162 aa5.91□□□□□ -1.46
CLK1-215ENST00000621181 FAM24BQ8N5W8 94 aa5.91□□□□□ -1.46
CLK1-215ENST00000621181 DEFB125Q8N687 156 aa5.91□□□□□ -1.46
CLK1-215ENST00000621181 TMEM217Q8N7C4 229 aa5.91□□□□□ -1.46
CLK1-215ENST00000621181 DYNLRB2Q8TF09 96 aa5.91□□□□□ -1.46
CLK1-215ENST00000621181 DDB2Q92466 427 aa5.91□□□□□ -1.46
CLK1-215ENST00000621181 C5orf30Q96GV9 206 aa5.91□□□□□ -1.46
CLK1-215ENST00000621181 TMEM68Q96MH6 324 aa5.91□□□□□ -1.46
CLK1-215ENST00000621181 WFDC10AQ9H1F0 79 aa5.91□□□□□ -1.46
CLK1-215ENST00000621181 DNAH1Q9P2D7 4330 aa5.91□□□□□ -1.46
CLK1-215ENST00000621181 CXorf65A6NEN9 183 aa5.9□□□□□ -1.46
CLK1-215ENST00000621181 ITGB1BP1O14713 200 aa5.9□□□□□ -1.46
CLK1-215ENST00000621181 HBE1P02100 147 aa5.9□□□□□ -1.46
CLK1-215ENST00000621181 S100A8P05109 93 aa5.9□□□□□ -1.46
CLK1-215ENST00000621181 SMIM6P0DI80 62 aa5.9□□□□□ -1.46
CLK1-215ENST00000621181 LINC00205P59089 165 aa5.9□□□□□ -1.46
CLK1-215ENST00000621181 KHDC3LQ587J8 217 aa5.9□□□□□ -1.46
CLK1-215ENST00000621181 ZNF383Q8NA42 475 aa5.9□□□□□ -1.46
CLK1-215ENST00000621181 OR51H1Q8NH63 302 aa5.9□□□□□ -1.46
CLK1-215ENST00000621181 CD300LFQ8TDQ1 290 aa5.9□□□□□ -1.46
CLK1-215ENST00000621181 PSMG3Q9BT73 122 aaPredicted RBP5.9□□□□□ -1.46
CLK1-215ENST00000621181 RPRMQ9NS64 109 aa5.9□□□□□ -1.46
CLK1-215ENST00000621181 CACNG5Q9UF02 275 aa5.9□□□□□ -1.46
CLK1-215ENST00000621181 PCP4L1A6NKN8 68 aa5.9□□□□□ -1.47
CLK1-215ENST00000621181 FAM90A26D6RGX4 464 aa5.9□□□□□ -1.47
CLK1-215ENST00000621181 SYNGR2O43760 224 aa5.9□□□□□ -1.47
CLK1-215ENST00000621181 NXPH3O95157 252 aa5.9□□□□□ -1.47
CLK1-215ENST00000621181 GHRHP01286 108 aa5.9□□□□□ -1.47
CLK1-215ENST00000621181 SERPINE2P07093 398 aa5.9□□□□□ -1.47
CLK1-215ENST00000621181 S100GP29377 79 aa5.9□□□□□ -1.47
CLK1-215ENST00000621181 BRWD1-AS2P59051 145 aa5.9□□□□□ -1.47
CLK1-215ENST00000621181 SSBP2P81877 361 aaPredicted RBP5.9□□□□□ -1.47
CLK1-215ENST00000621181 MSMO1Q15800 293 aa5.9□□□□□ -1.47
CLK1-215ENST00000621181 AKR1C8PQ5T2L2 129 aa5.9□□□□□ -1.47
CLK1-215ENST00000621181 FAM90A2PQ658T7 463 aa5.9□□□□□ -1.47
CLK1-215ENST00000621181 TMEM14EPQ6UXP3 125 aa5.9□□□□□ -1.47
CLK1-215ENST00000621181 SSX7Q7RTT5 188 aa5.9□□□□□ -1.47
CLK1-215ENST00000621181 STX12Q86Y82 276 aa5.9□□□□□ -1.47
CLK1-215ENST00000621181 CYB561D1Q8N8Q1 229 aa5.9□□□□□ -1.47
CLK1-215ENST00000621181 HARBI1Q96MB7 349 aa5.9□□□□□ -1.47
CLK1-215ENST00000621181 SLC35D1Q9NTN3 355 aa5.9□□□□□ -1.47
CLK1-215ENST00000621181 PUS1Q9Y606 427 aaKnown RBP eCLIP5.9□□□□□ -1.47
CLK1-215ENST00000621181 NUPR2A6NF83 97 aa5.89□□□□□ -1.47
CLK1-215ENST00000621181 IFITM10A6NMD0 228 aa5.89□□□□□ -1.47
CLK1-215ENST00000621181 PMS2P5A8MQ11 134 aa5.89□□□□□ -1.47
CLK1-215ENST00000621181 H3BP45 60 aa5.89□□□□□ -1.47
CLK1-215ENST00000621181 M0R1X1 148 aa5.89□□□□□ -1.47
CLK1-215ENST00000621181 WRBO00258 174 aa5.89□□□□□ -1.47
CLK1-215ENST00000621181 EREGO14944 169 aa5.89□□□□□ -1.47
CLK1-215ENST00000621181 PROP1O75360 226 aa5.89□□□□□ -1.47
CLK1-215ENST00000621181 OR2C1O95371 312 aa5.89□□□□□ -1.47
CLK1-215ENST00000621181 ELOBQ15370 118 aa5.89□□□□□ -1.47
CLK1-215ENST00000621181 SLC16A13Q7RTY0 426 aa5.89□□□□□ -1.47
CLK1-215ENST00000621181 RSG1Q9BU20 258 aa5.89□□□□□ -1.47
CLK1-215ENST00000621181 VSIRQ9H7M9 311 aa5.89□□□□□ -1.47
CLK1-215ENST00000621181 ZNF785A8K8V0 405 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 ZNF727A8MUV8 499 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 BMPR1BO00238 502 aa5.88□□□□□ -1.47
CLK1-215ENST00000621181 PHOX2AO14813 284 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms