RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 RIGQ13278 110 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 HLA-DRB5Q30154 266 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 DMRTA1Q5VZB9 504 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 HIST3H2BBQ8N257 126 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 MBD3L1Q8WWY6 194 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 IGFBPL1Q8WX77 278 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 ARPC1AQ92747 370 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 RHOGP84095 191 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 LYPD2Q6UXB3 125 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 NRGNQ92686 78 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 BEX4Q9NWD9 120 aaPredicted RBP6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 YTHDF2Q9Y5A9 579 aaKnown RBP6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 TCF15Q12870 199 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 IBA57Q5T440 356 aaKnown RBP6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 LINC00469Q8N7U9 141 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 EEF1AKMT3Q96AZ1 226 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 NPFFR1Q9GZQ6 430 aa6.81□□□□□ -1.32
PTPDC1-204ENST00000620992 ELOA3CA0A087WX78 387 aaPredicted RBP6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 NMUP48645 174 aa6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 FBLN7Q53RD9 439 aa6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 TMEM133Q9H2Q1 129 aa6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 PARLQ9H300 379 aa6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 PRO3102Q9H379 93 aa6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 MANBALQ9NQG1 85 aa6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 IGKV3D-20A0A0C4DH25 116 aa6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 IQCF6A8MYZ5 107 aa6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 K7ENP7 123 aa6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 M0R3E3 92 aa6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 NBEAP1P0C6P0 100 aa6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 SNRPD3P62318 126 aaKnown RBP6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 FAM159AQ6UWV7 190 aa6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 VN1R17PQ8TDU5 208 aa6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 ELOVL1Q9BW60 279 aa6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 TEX50A0A1B0GTY4 177 aa6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 CORTO00230 105 aa6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 GCSHP23434 173 aa6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 OR1N2Q8NGR9 330 aa6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 C18orf15Q96N68 181 aa6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 DSCAML1Q8TD84 2053 aa6.8□□□□□ -1.32
PTPDC1-204ENST00000620992 TRGV2A0A075B6R0 118 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 PSMB2P49721 201 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 NDPQ00604 133 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 GCSAMLQ5JQS6 135 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 ATOH7Q8N100 152 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 A8MWL6 223 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 SLC17A3O00476 420 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 CEACAM4O75871 244 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 CCKARP32238 428 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 CD69Q07108 199 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 MDS2Q8NDY4 140 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 TNRC6AQ8NDV7 1962 aaKnown RBP6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 TCRBV4S1A1TA0A5B7 111 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 J3QW42 95 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 IFNL4K9M1U5 179 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 RPL23P62829 140 aaKnown RBP6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 TMEM14EPQ6UXP3 125 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 LINC00312Q9Y6C7 94 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 TIMP3P35625 211 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 IGFL4Q6B9Z1 124 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 FAM71F2Q6NXP2 309 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 CYP2G1PQ6ZSU1 146 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 ST6GALNAC3Q8NDV1 305 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 HIST1H2BLQ99880 126 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 MIEN1Q9BRT3 115 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 PLSCR4Q9NRQ2 329 aa6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 DSPP15924 2871 aaKnown RBP6.79□□□□□ -1.32
PTPDC1-204ENST00000620992 A0A1W2PNU3 283 aaPredicted RBP6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 CBY3A6NI87 242 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 FAM90A26D6RGX4 464 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 TDGF1P13385 188 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 ZNF146Q15072 292 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 MORN2Q502X0 79 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 RUSC1-AS1Q66K80 236 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 LINC01587Q99440 93 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 NPCDR1Q9BY65 106 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 MBNL3Q9NUK0 354 aaKnown RBP6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 SLC25A15Q9Y619 301 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 NBR2O15453 112 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 APCSP02743 223 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 PYYP10082 97 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 EFNA4P52798 201 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 ADIPOQQ15848 244 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 DUX3Q96PT4 197 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 TMEM242Q9NWH2 141 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 TOMM7Q9P0U1 55 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 PCSK5Q92824 1860 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 TRBV24-1A0A075B6N3 115 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 A0A087X0M5 115 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 A0A1B0GX30 115 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 PGPEP1LA6NFU8 196 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 ZNF688P0C7X2 276 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 DLX6P56179 175 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 ERVK11-1P61568 191 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 ASCL2Q99929 193 aa6.78□□□□□ -1.32
PTPDC1-204ENST00000620992 E7EQL1 145 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 PDE6DO43924 150 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 IL6RP08887 468 aaPredicted RBP6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 FXYD7P58549 80 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 GNG5P63218 68 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms