RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 LGALS1P09382 135 aaKnown RBP6.19□□□□□ -1.42
CPNE3-209ENST00000620393 RD3LP0DJH9 198 aa6.19□□□□□ -1.42
CPNE3-209ENST00000620393 PSG1P11464 419 aa6.19□□□□□ -1.42
CPNE3-209ENST00000620393 GATA2P23769 480 aaPredicted RBP6.19□□□□□ -1.42
CPNE3-209ENST00000620393 GPR183P32249 361 aa6.19□□□□□ -1.42
CPNE3-209ENST00000620393 MIC13Q5XKP0 118 aa6.19□□□□□ -1.42
CPNE3-209ENST00000620393 TEX261Q6UWH6 196 aa6.19□□□□□ -1.42
CPNE3-209ENST00000620393 BPIFCQ8NFQ6 507 aa6.19□□□□□ -1.42
CPNE3-209ENST00000620393 OR2G3Q8NGZ4 309 aa6.19□□□□□ -1.42
CPNE3-209ENST00000620393 Q8WTZ3 238 aa6.19□□□□□ -1.42
CPNE3-209ENST00000620393 PHYHIPLQ96FC7 376 aa6.19□□□□□ -1.42
CPNE3-209ENST00000620393 CITED2Q99967 270 aaPredicted RBP6.19□□□□□ -1.42
CPNE3-209ENST00000620393 SH3BGRL3Q9H299 93 aa6.19□□□□□ -1.42
CPNE3-209ENST00000620393 PXMP4Q9Y6I8 212 aa6.19□□□□□ -1.42
CPNE3-209ENST00000620393 NIPBLQ6KC79 2804 aaeCLIP6.19□□□□□ -1.42
CPNE3-209ENST00000620393 ANKRD34BA5PLL1 514 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 PPP5D1E7EU14 171 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 I3L521 148 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 GGCTO75223 188 aaKnown RBP6.18□□□□□ -1.42
CPNE3-209ENST00000620393 OR2C1O95371 312 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 TSPAN15O95858 294 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 TOMM40O96008 361 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 TRBV12-3P01733 135 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 MBP02144 154 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 ARL3P36405 182 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 PLP1P60201 277 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 KRTAP10-3P60369 221 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 B2MP61769 119 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 IFITM2Q01629 132 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 RELQ04864 619 aaPredicted RBP6.18□□□□□ -1.42
CPNE3-209ENST00000620393 ZNF616Q08AN1 781 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 KRTAP24-1Q3LI83 254 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 AWAT1Q58HT5 328 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 ZNF600Q6ZNG1 722 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 Q6ZRG5 221 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 C18orf65Q6ZTR6 163 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 STPG3Q8N7X2 389 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 C11orf44Q8N8P7 122 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 ZNF680Q8NEM1 530 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 TMED6Q8WW62 240 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 ZNF414Q96IQ9 312 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 OR5B12Q96R08 314 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 KCNIP2Q9NS61 270 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 SLC39A9Q9NUM3 307 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 TSSC4Q9Y5U2 329 aaPredicted RBP6.18□□□□□ -1.42
CPNE3-209ENST00000620393 C2CD3Q4AC94 2353 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 NF1P21359 2839 aa6.18□□□□□ -1.42
CPNE3-209ENST00000620393 WI2-2373I1.2A0A1W2PRP0 233 aa6.17□□□□□ -1.42
CPNE3-209ENST00000620393 UMAD1C9J7I0 102 aa6.17□□□□□ -1.42
CPNE3-209ENST00000620393 BMPR1BO00238 502 aa6.17□□□□□ -1.42
CPNE3-209ENST00000620393 HYPMO75409 117 aa6.17□□□□□ -1.42
CPNE3-209ENST00000620393 YIF1AO95070 293 aa6.17□□□□□ -1.42
CPNE3-209ENST00000620393 IFNA7P01567 189 aa6.17□□□□□ -1.42
CPNE3-209ENST00000620393 SULT1A2P50226 295 aa6.17□□□□□ -1.42
CPNE3-209ENST00000620393 RAB5CP51148 216 aa6.17□□□□□ -1.42
CPNE3-209ENST00000620393 ACOT6Q3I5F7 207 aaPredicted RBP6.17□□□□□ -1.42
CPNE3-209ENST00000620393 FFAR4Q5NUL3 377 aa6.17□□□□□ -1.42
CPNE3-209ENST00000620393 AKR1C8PQ5T2L2 129 aa6.17□□□□□ -1.42
CPNE3-209ENST00000620393 PXDC1Q5TGL8 231 aa6.17□□□□□ -1.42
CPNE3-209ENST00000620393 ALKAL2Q6UX46 152 aa6.17□□□□□ -1.42
CPNE3-209ENST00000620393 TOMM20LQ6UXN7 152 aa6.17□□□□□ -1.42
CPNE3-209ENST00000620393 GPHB5Q86YW7 130 aa6.17□□□□□ -1.42
CPNE3-209ENST00000620393 OR51G1Q8NGK1 321 aa6.17□□□□□ -1.42
CPNE3-209ENST00000620393 OR1N2Q8NGR9 330 aa6.17□□□□□ -1.42
CPNE3-209ENST00000620393 C4orf3Q8WVX3 66 aa6.17□□□□□ -1.42
CPNE3-209ENST00000620393 C19orf24Q9BVV8 132 aa6.17□□□□□ -1.42
CPNE3-209ENST00000620393 DNAJC4Q9NNZ3 241 aa6.17□□□□□ -1.42
CPNE3-209ENST00000620393 RPRMQ9NS64 109 aa6.17□□□□□ -1.42
CPNE3-209ENST00000620393 PUS1Q9Y606 427 aaKnown RBP eCLIP6.17□□□□□ -1.42
CPNE3-209ENST00000620393 IGHV3-35A0A0C4DH35 117 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 NUDT19A8MXV4 375 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 NDUFA4O00483 81 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 ORM2P19652 201 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 M6PRP20645 277 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 ELLP55199 621 aaPredicted RBP6.16□□□□□ -1.42
CPNE3-209ENST00000620393 FAM106AQ4KMX7 169 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 TMEM41BQ5BJD5 291 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 KHDC1LQ5JSQ8 128 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 HIST2H2BDQ6DRA6 164 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 PATE2Q6UY27 113 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 ZNF767PQ75MW2 155 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 NDUFA11Q86Y39 141 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 LURAP1LQ8IV03 231 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 RPP25LQ8N5L8 163 aaKnown RBP6.16□□□□□ -1.42
CPNE3-209ENST00000620393 KLHL30-AS1Q8NEE0 82 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 OR11H1Q8NG94 326 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 OR10G4Q8NGN3 311 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 OR10G9Q8NGN4 311 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 OR10G7Q8NGN6 311 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 OR1L4Q8NGR5 311 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 GATAD1Q8WUU5 269 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 RNF141Q8WVD5 230 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 TMEM37Q8WXS4 190 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 TMEM158Q8WZ71 300 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 DPF1Q92782 380 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 VSIRQ9H7M9 311 aa6.16□□□□□ -1.42
CPNE3-209ENST00000620393 MRPL27Q9P0M9 148 aaKnown RBP6.16□□□□□ -1.42
CPNE3-209ENST00000620393 IGHV4OR15-8A0A075B7B6 117 aa6.15□□□□□ -1.42
CPNE3-209ENST00000620393 A0A087WW49 117 aa6.15□□□□□ -1.42
CPNE3-209ENST00000620393 LINC01619G3V211 115 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms