RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 RD3LP0DJH9 198 aa11.87□□□□□ -0.51
BRCA1-228ENST00000618469 PAFAH1B2P68402 229 aa11.87□□□□□ -0.51
BRCA1-228ENST00000618469 GAMTQ14353 236 aa11.87□□□□□ -0.51
BRCA1-228ENST00000618469 IAH1Q2TAA2 248 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-228ENST00000618469 WFDC3Q8IUB2 231 aa11.87□□□□□ -0.51
BRCA1-228ENST00000618469 GRAMD2BQ96HH9 432 aa11.87□□□□□ -0.51
BRCA1-228ENST00000618469 SEC22CQ9BRL7 303 aa11.87□□□□□ -0.51
BRCA1-228ENST00000618469 MS4A6AQ9H2W1 248 aa11.87□□□□□ -0.51
BRCA1-228ENST00000618469 BATF3Q9NR55 127 aa11.87□□□□□ -0.51
BRCA1-228ENST00000618469 RABAC1Q9UI14 185 aa11.87□□□□□ -0.51
BRCA1-228ENST00000618469 DNASE2O00115 360 aaPredicted RBP11.86□□□□□ -0.51
BRCA1-228ENST00000618469 CCSO14618 274 aa11.86□□□□□ -0.51
BRCA1-228ENST00000618469 PSG1P11464 419 aa11.86□□□□□ -0.51
BRCA1-228ENST00000618469 ID3Q02535 119 aa11.86□□□□□ -0.51
BRCA1-228ENST00000618469 ASAH1Q13510 395 aa11.86□□□□□ -0.51
BRCA1-228ENST00000618469 ZNF846Q147U1 533 aa11.86□□□□□ -0.51
BRCA1-228ENST00000618469 MZT2BQ6NZ67 158 aa11.86□□□□□ -0.51
BRCA1-228ENST00000618469 APRG1Q8IVJ8 170 aa11.86□□□□□ -0.51
BRCA1-228ENST00000618469 STXBP6Q8NFX7 210 aa11.86□□□□□ -0.51
BRCA1-228ENST00000618469 MAP6D1Q9H9H5 199 aa11.86□□□□□ -0.51
BRCA1-228ENST00000618469 STRAPQ9Y3F4 350 aaKnown RBP11.86□□□□□ -0.51
BRCA1-228ENST00000618469 IGKV1D-37A0A075B6S9 117 aa11.85□□□□□ -0.51
BRCA1-228ENST00000618469 H2AFB2P0C5Z0 115 aa11.85□□□□□ -0.51
BRCA1-228ENST00000618469 ZNF124Q15973 351 aa11.85□□□□□ -0.51
BRCA1-228ENST00000618469 ACOT7LQ6ZUV0 252 aa11.85□□□□□ -0.51
BRCA1-228ENST00000618469 ZBTB8BQ8NAP8 495 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-228ENST00000618469 OR51G1Q8NGK1 321 aa11.85□□□□□ -0.51
BRCA1-228ENST00000618469 RNF125Q96EQ8 232 aa11.85□□□□□ -0.51
BRCA1-228ENST00000618469 PBDC1Q9BVG4 233 aa11.85□□□□□ -0.51
BRCA1-228ENST00000618469 PRSS46E5RG02 174 aa11.84□□□□□ -0.51
BRCA1-228ENST00000618469 UPK1BO75841 260 aa11.84□□□□□ -0.51
BRCA1-228ENST00000618469 FABP1P07148 127 aa11.84□□□□□ -0.51
BRCA1-228ENST00000618469 RPL35AP18077 110 aaKnown RBP11.84□□□□□ -0.51
BRCA1-228ENST00000618469 APOC4P55056 127 aa11.84□□□□□ -0.51
BRCA1-228ENST00000618469 ZNF90Q03938 601 aa11.84□□□□□ -0.51
BRCA1-228ENST00000618469 AKR1C1Q04828 323 aa11.84□□□□□ -0.51
BRCA1-228ENST00000618469 FAM24BQ8N5W8 94 aa11.84□□□□□ -0.51
BRCA1-228ENST00000618469 ENKURQ8TC29 256 aa11.84□□□□□ -0.51
BRCA1-228ENST00000618469 ZNF431Q8TF32 576 aaPredicted RBP11.84□□□□□ -0.51
BRCA1-228ENST00000618469 EDA2RQ9HAV5 297 aa11.84□□□□□ -0.51
BRCA1-228ENST00000618469 PSENENQ9NZ42 101 aa11.84□□□□□ -0.51
BRCA1-228ENST00000618469 GSKIPQ9P0R6 139 aa11.84□□□□□ -0.51
BRCA1-228ENST00000618469 U3KQE9 123 aa11.84□□□□□ -0.51
BRCA1-228ENST00000618469 TRAV2A0A0B4J234 112 aa11.83□□□□□ -0.52
BRCA1-228ENST00000618469 FAM25EA8MYX2 175 aa11.83□□□□□ -0.52
BRCA1-228ENST00000618469 EIF2B2P49770 351 aaKnown RBP11.83□□□□□ -0.52
BRCA1-228ENST00000618469 LYZP61626 148 aa11.83□□□□□ -0.52
BRCA1-228ENST00000618469 OR2F1Q13607 317 aa11.83□□□□□ -0.52
BRCA1-228ENST00000618469 GLMPQ8WWB7 406 aa11.83□□□□□ -0.52
BRCA1-228ENST00000618469 TRGV9Q99603 122 aa11.83□□□□□ -0.52
BRCA1-228ENST00000618469 RCL1Q9Y2P8 373 aaKnown RBP11.83□□□□□ -0.52
BRCA1-228ENST00000618469 IGKV1OR2-108A0A075B7D4 117 aa11.82□□□□□ -0.52
BRCA1-228ENST00000618469 SMCO3A2RU48 225 aa11.82□□□□□ -0.52
BRCA1-228ENST00000618469 HELTA6NFD8 242 aa11.82□□□□□ -0.52
BRCA1-228ENST00000618469 CMC4P56277 68 aaPredicted RBP11.82□□□□□ -0.52
BRCA1-228ENST00000618469 DEFB131AP59861 70 aa11.82□□□□□ -0.52
BRCA1-228ENST00000618469 LEMD1Q68G75 181 aa11.82□□□□□ -0.52
BRCA1-228ENST00000618469 OR8G2PQ6IF36 304 aa11.82□□□□□ -0.52
BRCA1-228ENST00000618469 C16orf54Q6UWD8 224 aa11.82□□□□□ -0.52
BRCA1-228ENST00000618469 C12orf45Q8N5I9 185 aaPredicted RBP11.82□□□□□ -0.52
BRCA1-228ENST00000618469 THAP8Q8NA92 274 aa11.82□□□□□ -0.52
BRCA1-228ENST00000618469 K7EQG2 157 aa11.81□□□□□ -0.52
BRCA1-228ENST00000618469 CCNKO75909 580 aa11.81□□□□□ -0.52
BRCA1-228ENST00000618469 NUP62P37198 522 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-228ENST00000618469 DEFB135Q30KP9 77 aa11.81□□□□□ -0.52
BRCA1-228ENST00000618469 SMIM8Q96KF7 97 aa11.81□□□□□ -0.52
BRCA1-228ENST00000618469 RAB40CQ96S21 281 aa11.81□□□□□ -0.52
BRCA1-228ENST00000618469 KIR2DL5BA0A0G2JN68 375 aa11.8□□□□□ -0.52
BRCA1-228ENST00000618469 KIR2DL5BA0A0G2JPC4 375 aa11.8□□□□□ -0.52
BRCA1-228ENST00000618469 C5orf51A6NDU8 294 aa11.8□□□□□ -0.52
BRCA1-228ENST00000618469 BUB3O43684 328 aa11.8□□□□□ -0.52
BRCA1-228ENST00000618469 MBPP02686 304 aaPredicted RBP11.8□□□□□ -0.52
BRCA1-228ENST00000618469 ZNF688P0C7X2 276 aa11.8□□□□□ -0.52
BRCA1-228ENST00000618469 PAX9P55771 341 aa11.8□□□□□ -0.52
BRCA1-228ENST00000618469 IFITM3Q01628 133 aa11.8□□□□□ -0.52
BRCA1-228ENST00000618469 SIGLEC15Q6ZMC9 328 aa11.8□□□□□ -0.52
BRCA1-228ENST00000618469 KIR2DL5AQ8N109 375 aa11.8□□□□□ -0.52
BRCA1-228ENST00000618469 STPG3Q8N7X2 389 aa11.8□□□□□ -0.52
BRCA1-228ENST00000618469 KIR2DL5BQ8NHK3 375 aa11.8□□□□□ -0.52
BRCA1-228ENST00000618469 DCANP1Q8TF63 244 aa11.8□□□□□ -0.52
BRCA1-228ENST00000618469 SNRPGP15A8MWD9 76 aa11.79□□□□□ -0.52
BRCA1-228ENST00000618469 TSC22D2O75157 780 aa11.79□□□□□ -0.52
BRCA1-228ENST00000618469 METTL15P1P0C7V9 234 aa11.79□□□□□ -0.52
BRCA1-228ENST00000618469 RRAS2P62070 204 aaPredicted RBP11.79□□□□□ -0.52
BRCA1-228ENST00000618469 TMEM14EPQ6UXP3 125 aa11.79□□□□□ -0.52
BRCA1-228ENST00000618469 PPP1R14BQ96C90 147 aa11.79□□□□□ -0.52
BRCA1-228ENST00000618469 OVOL2Q9BRP0 275 aa11.79□□□□□ -0.52
BRCA1-228ENST00000618469 PFDN2Q9UHV9 154 aa11.79□□□□□ -0.52
BRCA1-228ENST00000618469 LSM5Q9Y4Y9 91 aaKnown RBP11.79□□□□□ -0.52
BRCA1-228ENST00000618469 PMS2P5A8MQ11 134 aa11.78□□□□□ -0.52
BRCA1-228ENST00000618469 L7N2F9 121 aa11.78□□□□□ -0.52
BRCA1-228ENST00000618469 UBE2CO00762 179 aa11.78□□□□□ -0.52
BRCA1-228ENST00000618469 AP2S1P53680 142 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-228ENST00000618469 TAS2R30P59541 319 aa11.78□□□□□ -0.52
BRCA1-228ENST00000618469 VAMP2P63027 116 aa11.78□□□□□ -0.52
BRCA1-228ENST00000618469 Q6ZWC4 215 aa11.78□□□□□ -0.52
BRCA1-228ENST00000618469 NRN1Q9NPD7 142 aa11.78□□□□□ -0.52
BRCA1-228ENST00000618469 C7orf66A4D0T2 115 aa11.77□□□□□ -0.53
BRCA1-228ENST00000618469 K7EPK0 472 aa11.77□□□□□ -0.53
BRCA1-228ENST00000618469 IL5P05113 134 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms