RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 STRCP1A6NGW2 1772 aa12.62□□□□□ -0.39
COL5A1-208ENST00000618395 COX8AP10176 69 aa12.62□□□□□ -0.39
COL5A1-208ENST00000618395 TRAV26-1A0A087WT03 109 aa12.62□□□□□ -0.39
COL5A1-208ENST00000618395 CD3EP07766 207 aa12.62□□□□□ -0.39
COL5A1-208ENST00000618395 EGR2P11161 476 aaPredicted RBP12.62□□□□□ -0.39
COL5A1-208ENST00000618395 ZIC1Q15915 447 aa12.62□□□□□ -0.39
COL5A1-208ENST00000618395 BVES-AS1Q5T3Y7 98 aa12.62□□□□□ -0.39
COL5A1-208ENST00000618395 CEND1Q8N111 149 aa12.62□□□□□ -0.39
COL5A1-208ENST00000618395 IGHV2-70DA0A0C4DH43 119 aa12.61□□□□□ -0.39
COL5A1-208ENST00000618395 FGF6P10767 208 aa12.61□□□□□ -0.39
COL5A1-208ENST00000618395 FDCSPQ8NFU4 85 aa12.61□□□□□ -0.39
COL5A1-208ENST00000618395 NHSQ6T4R5 1651 aa12.61□□□□□ -0.39
COL5A1-208ENST00000618395 CCL25O15444 150 aa12.61□□□□□ -0.39
COL5A1-208ENST00000618395 DRD3P35462 400 aa12.61□□□□□ -0.39
COL5A1-208ENST00000618395 UCN2Q96RP3 112 aa12.61□□□□□ -0.39
COL5A1-208ENST00000618395 WBP1LQ9NX94 342 aa12.61□□□□□ -0.39
COL5A1-208ENST00000618395 CDCP2Q5VXM1 449 aa12.61□□□□□ -0.39
COL5A1-208ENST00000618395 RPUSD1Q9UJJ7 312 aaKnown RBP12.61□□□□□ -0.39
COL5A1-208ENST00000618395 VWA8A3KMH1 1905 aa12.61□□□□□ -0.39
COL5A1-208ENST00000618395 NAV3Q8IVL0 2385 aa12.61□□□□□ -0.39
COL5A1-208ENST00000618395 CD7P09564 240 aa12.6□□□□□ -0.39
COL5A1-208ENST00000618395 STPG4Q8N801 248 aa12.6□□□□□ -0.39
COL5A1-208ENST00000618395 VGLL1Q99990 258 aa12.6□□□□□ -0.39
COL5A1-208ENST00000618395 CD69Q07108 199 aa12.6□□□□□ -0.39
COL5A1-208ENST00000618395 IGHV2OR16-5A0A0B4J2B6 119 aa12.6□□□□□ -0.39
COL5A1-208ENST00000618395 C16orf47Q6ZP98 133 aaPredicted RBP12.6□□□□□ -0.39
COL5A1-208ENST00000618395 DSCR8Q96T75 97 aa12.6□□□□□ -0.39
COL5A1-208ENST00000618395 ACYP1P07311 99 aa12.6□□□□□ -0.39
COL5A1-208ENST00000618395 APOBEC3AP31941 199 aaPredicted RBP12.6□□□□□ -0.39
COL5A1-208ENST00000618395 LAIR2Q6ISS4 152 aa12.6□□□□□ -0.39
COL5A1-208ENST00000618395 MYMXA0A1B0GTQ4 84 aa12.6□□□□□ -0.39
COL5A1-208ENST00000618395 CCL7P80098 99 aa12.6□□□□□ -0.39
COL5A1-208ENST00000618395 PSG4Q00888 419 aa12.6□□□□□ -0.39
COL5A1-208ENST00000618395 CLEC7AQ9BXN2 247 aa12.6□□□□□ -0.39
COL5A1-208ENST00000618395 RNF115Q9Y4L5 304 aa12.6□□□□□ -0.39
COL5A1-208ENST00000618395 RASL10BQ96S79 203 aa12.59□□□□□ -0.39
COL5A1-208ENST00000618395 Q6ZNB5 142 aa12.59□□□□□ -0.39
COL5A1-208ENST00000618395 COL22A1Q8NFW1 1626 aaPredicted RBP12.59□□□□□ -0.39
COL5A1-208ENST00000618395 IGHV5-51A0A0C4DH38 117 aa12.59□□□□□ -0.39
COL5A1-208ENST00000618395 IGHV2-5P01817 119 aa12.59□□□□□ -0.39
COL5A1-208ENST00000618395 HLA-DMBP28068 263 aa12.59□□□□□ -0.39
COL5A1-208ENST00000618395 DEPPQ9NTK1 212 aa12.59□□□□□ -0.39
COL5A1-208ENST00000618395 LY96Q9Y6Y9 160 aa12.59□□□□□ -0.39
COL5A1-208ENST00000618395 HERV-K104P63124 156 aa12.59□□□□□ -0.39
COL5A1-208ENST00000618395 TMEM240Q5SV17 173 aa12.59□□□□□ -0.39
COL5A1-208ENST00000618395 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.59□□□□□ -0.39
COL5A1-208ENST00000618395 NPIPB5A8MRT5 1133 aa12.59□□□□□ -0.39
COL5A1-208ENST00000618395 TM4SF4P48230 202 aa12.59□□□□□ -0.39
COL5A1-208ENST00000618395 CCL13Q99616 98 aa12.59□□□□□ -0.39
COL5A1-208ENST00000618395 F8WEM9 126 aa12.59□□□□□ -0.39
COL5A1-208ENST00000618395 TEX43Q6ZNM6 134 aa12.59□□□□□ -0.39
COL5A1-208ENST00000618395 FOXA2Q9Y261 457 aaPredicted RBP12.59□□□□□ -0.39
COL5A1-208ENST00000618395 LHFPL6Q9Y693 200 aa12.59□□□□□ -0.39
COL5A1-208ENST00000618395 COL9A1P20849 921 aa12.58□□□□□ -0.4
COL5A1-208ENST00000618395 ANXA2RQ3ZCQ2 193 aa12.58□□□□□ -0.4
COL5A1-208ENST00000618395 TAF1LQ8IZX4 1826 aa12.58□□□□□ -0.4
COL5A1-208ENST00000618395 HAMPP81172 84 aa12.58□□□□□ -0.4
COL5A1-208ENST00000618395 CD55P08174 381 aa12.58□□□□□ -0.4
COL5A1-208ENST00000618395 AMELYQ99218 206 aa12.58□□□□□ -0.4
COL5A1-208ENST00000618395 TIMM21Q9BVV7 248 aa12.58□□□□□ -0.4
COL5A1-208ENST00000618395 PMS2CLQ68D20 193 aa12.58□□□□□ -0.4
COL5A1-208ENST00000618395 SPINK14Q6IE38 97 aa12.58□□□□□ -0.4
COL5A1-208ENST00000618395 ANAPC10Q9UM13 185 aa12.58□□□□□ -0.4
COL5A1-208ENST00000618395 MORN5Q5VZ52 161 aa12.58□□□□□ -0.4
COL5A1-208ENST00000618395 PHF7Q9BWX1 381 aaPredicted RBP12.58□□□□□ -0.4
COL5A1-208ENST00000618395 PRO1854Q9UHT4 67 aa12.58□□□□□ -0.4
COL5A1-208ENST00000618395 ADARB2-AS1A8MUL3 147 aa12.58□□□□□ -0.4
COL5A1-208ENST00000618395 VN1R4Q7Z5H5 301 aa12.58□□□□□ -0.4
COL5A1-208ENST00000618395 QSER1Q2KHR3 1735 aa12.57□□□□□ -0.4
COL5A1-208ENST00000618395 LOC102723996A0A087X1L8 192 aa12.57□□□□□ -0.4
COL5A1-208ENST00000618395 PLXNA3P51805 1871 aa12.57□□□□□ -0.4
COL5A1-208ENST00000618395 INS-IGF2F8WCM5 200 aa12.57□□□□□ -0.4
COL5A1-208ENST00000618395 INSP01308 110 aa12.57□□□□□ -0.4
COL5A1-208ENST00000618395 SLC25A39Q9BZJ4 359 aaPredicted RBP12.57□□□□□ -0.4
COL5A1-208ENST00000618395 MRPL23Q16540 153 aaKnown RBP12.57□□□□□ -0.4
COL5A1-208ENST00000618395 OSR1Q8TAX0 266 aaPredicted RBP12.57□□□□□ -0.4
COL5A1-208ENST00000618395 A0A0G2JK05 382 aa12.57□□□□□ -0.4
COL5A1-208ENST00000618395 TMEM131Q92545 1883 aa12.57□□□□□ -0.4
COL5A1-208ENST00000618395 KLK10O43240 276 aa12.57□□□□□ -0.4
COL5A1-208ENST00000618395 AGFG2O95081 481 aa12.57□□□□□ -0.4
COL5A1-208ENST00000618395 TMEM158Q8WZ71 300 aa12.57□□□□□ -0.4
COL5A1-208ENST00000618395 SPANXB1Q9NS25 103 aaPredicted RBP12.57□□□□□ -0.4
COL5A1-208ENST00000618395 H0YIZ8 118 aa12.57□□□□□ -0.4
COL5A1-208ENST00000618395 MAGEA5P43359 124 aa12.57□□□□□ -0.4
COL5A1-208ENST00000618395 ZAR1Q86SH2 424 aa12.57□□□□□ -0.4
COL5A1-208ENST00000618395 ADCYAP1P18509 176 aa12.56□□□□□ -0.4
COL5A1-208ENST00000618395 BHLHA9Q7RTU4 235 aa12.56□□□□□ -0.4
COL5A1-208ENST00000618395 WFDC1Q9HC57 220 aa12.56□□□□□ -0.4
COL5A1-208ENST00000618395 PSG8Q9UQ74 426 aa12.56□□□□□ -0.4
COL5A1-208ENST00000618395 CTGFP29279 349 aa12.56□□□□□ -0.4
COL5A1-208ENST00000618395 FAM90A27PA6NNH2 459 aa12.56□□□□□ -0.4
COL5A1-208ENST00000618395 IGLV1-36A0A0B4J1U3 117 aa12.56□□□□□ -0.4
COL5A1-208ENST00000618395 PROB1E7EW31 1015 aa12.56□□□□□ -0.4
COL5A1-208ENST00000618395 LIFP15018 202 aa12.56□□□□□ -0.4
COL5A1-208ENST00000618395 C9orf172C9J069 976 aa12.55□□□□□ -0.4
COL5A1-208ENST00000618395 RASL10AQ92737 203 aa12.55□□□□□ -0.4
COL5A1-208ENST00000618395 LEAP2Q969E1 77 aa12.55□□□□□ -0.4
COL5A1-208ENST00000618395 ZNF319Q9P2F9 582 aa12.55□□□□□ -0.4
COL5A1-208ENST00000618395 U3KQE9 123 aa12.55□□□□□ -0.4
COL5A1-208ENST00000618395 SHISA3A0PJX4 238 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms