RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 OR51G1Q8NGK1 321 aa9.09□□□□□ -0.96
PDPN-211ENST00000617617 FAM213BQ8TBF2 198 aa9.09□□□□□ -0.96
PDPN-211ENST00000617617 DNAJC4Q9NNZ3 241 aa9.09□□□□□ -0.96
PDPN-211ENST00000617617 ZNF355PQ9NSJ1 428 aa9.09□□□□□ -0.96
PDPN-211ENST00000617617 LINC00527Q9UJ94 153 aa9.09□□□□□ -0.96
PDPN-211ENST00000617617 RAB19A4D1S5 217 aa9.08□□□□□ -0.96
PDPN-211ENST00000617617 H2AFB1P0C5Y9 115 aa9.08□□□□□ -0.96
PDPN-211ENST00000617617 RD3LP0DJH9 198 aa9.08□□□□□ -0.96
PDPN-211ENST00000617617 PSG1P11464 419 aa9.08□□□□□ -0.96
PDPN-211ENST00000617617 ADMP35318 185 aa9.08□□□□□ -0.96
PDPN-211ENST00000617617 ELLP55199 621 aaPredicted RBP9.08□□□□□ -0.96
PDPN-211ENST00000617617 RELQ04864 619 aaPredicted RBP9.08□□□□□ -0.96
PDPN-211ENST00000617617 S100A7AQ86SG5 101 aa9.08□□□□□ -0.96
PDPN-211ENST00000617617 KLK15Q9H2R5 256 aa9.08□□□□□ -0.96
PDPN-211ENST00000617617 RNF24Q9Y225 148 aa9.08□□□□□ -0.96
PDPN-211ENST00000617617 FUT9Q9Y231 359 aa9.08□□□□□ -0.96
PDPN-211ENST00000617617 TLN2Q9Y4G6 2542 aa9.08□□□□□ -0.96
PDPN-211ENST00000617617 TEX46H3BTG2 121 aa9.08□□□□□ -0.96
PDPN-211ENST00000617617 NUPL2O15504 423 aaKnown RBP9.08□□□□□ -0.96
PDPN-211ENST00000617617 IGHV3-48P01763 117 aa9.08□□□□□ -0.96
PDPN-211ENST00000617617 STAG3L2P0CL84 134 aa9.08□□□□□ -0.96
PDPN-211ENST00000617617 STAG3L3P0CL85 134 aa9.08□□□□□ -0.96
PDPN-211ENST00000617617 S100A7P31151 101 aa9.08□□□□□ -0.96
PDPN-211ENST00000617617 CDC34P49427 236 aaPredicted RBP9.08□□□□□ -0.96
PDPN-211ENST00000617617 TMEM190Q8WZ59 177 aa9.08□□□□□ -0.96
PDPN-211ENST00000617617 TECRQ9NZ01 308 aaKnown RBP9.08□□□□□ -0.96
PDPN-211ENST00000617617 ARL2-SNX15V9GYD0 113 aa9.08□□□□□ -0.96
PDPN-211ENST00000617617 IGHV3-21A0A0B4J1V1 117 aa9.07□□□□□ -0.96
PDPN-211ENST00000617617 PF4V1P10720 104 aa9.07□□□□□ -0.96
PDPN-211ENST00000617617 FHITP49789 147 aa9.07□□□□□ -0.96
PDPN-211ENST00000617617 PATE2Q6UY27 113 aa9.07□□□□□ -0.96
PDPN-211ENST00000617617 Q8WTZ3 238 aa9.07□□□□□ -0.96
PDPN-211ENST00000617617 TMEM37Q8WXS4 190 aa9.07□□□□□ -0.96
PDPN-211ENST00000617617 MS4A10Q96PG2 267 aa9.07□□□□□ -0.96
PDPN-211ENST00000617617 DUX5Q96PT3 197 aa9.07□□□□□ -0.96
PDPN-211ENST00000617617 A0A1B0GUS0 222 aa9.07□□□□□ -0.96
PDPN-211ENST00000617617 HYPMO75409 117 aa9.07□□□□□ -0.96
PDPN-211ENST00000617617 CLEC3BP05452 202 aa9.07□□□□□ -0.96
PDPN-211ENST00000617617 PPT1P50897 306 aa9.07□□□□□ -0.96
PDPN-211ENST00000617617 OR4F5Q8NH21 305 aa9.07□□□□□ -0.96
PDPN-211ENST00000617617 SMDT1Q9H4I9 107 aa9.07□□□□□ -0.96
PDPN-211ENST00000617617 ZFAND3Q9H8U3 227 aa9.07□□□□□ -0.96
PDPN-211ENST00000617617 LGALS1P09382 135 aaKnown RBP9.06□□□□□ -0.96
PDPN-211ENST00000617617 TAGLN2P37802 199 aaKnown RBP9.06□□□□□ -0.96
PDPN-211ENST00000617617 C10orf113Q5VZT2 155 aa9.06□□□□□ -0.96
PDPN-211ENST00000617617 UQCC3Q6UW78 93 aa9.06□□□□□ -0.96
PDPN-211ENST00000617617 SSX7Q7RTT5 188 aa9.06□□□□□ -0.96
PDPN-211ENST00000617617 LINC01006Q8NI28 216 aa9.06□□□□□ -0.96
PDPN-211ENST00000617617 RAB24Q969Q5 203 aa9.06□□□□□ -0.96
PDPN-211ENST00000617617 CHRDL1Q9BU40 450 aa9.06□□□□□ -0.96
PDPN-211ENST00000617617 PFDN2Q9UHV9 154 aa9.06□□□□□ -0.96
PDPN-211ENST00000617617 OR2T8A6NH00 312 aa9.06□□□□□ -0.96
PDPN-211ENST00000617617 NDUFA4O00483 81 aa9.06□□□□□ -0.96
PDPN-211ENST00000617617 CDX1P47902 265 aaPredicted RBP9.06□□□□□ -0.96
PDPN-211ENST00000617617 CTAG1AP78358 180 aa9.06□□□□□ -0.96
PDPN-211ENST00000617617 KHDC3LQ587J8 217 aa9.06□□□□□ -0.96
PDPN-211ENST00000617617 KLHDC1Q8N7A1 406 aa9.06□□□□□ -0.96
PDPN-211ENST00000617617 SCRT1Q9BWW7 348 aa9.06□□□□□ -0.96
PDPN-211ENST00000617617 MAP1LC3B2A6NCE7 125 aa9.05□□□□□ -0.96
PDPN-211ENST00000617617 COX7A2P2O60397 106 aa9.05□□□□□ -0.96
PDPN-211ENST00000617617 CXorf1O96002 111 aa9.05□□□□□ -0.96
PDPN-211ENST00000617617 PSMB3P49720 205 aa9.05□□□□□ -0.96
PDPN-211ENST00000617617 TAS2R45P59539 299 aa9.05□□□□□ -0.96
PDPN-211ENST00000617617 GCSAMLQ5JQS6 135 aa9.05□□□□□ -0.96
PDPN-211ENST00000617617 CLEC19AQ6UXS0 136 aa9.05□□□□□ -0.96
PDPN-211ENST00000617617 OR4X2Q8NGF9 303 aa9.05□□□□□ -0.96
PDPN-211ENST00000617617 MARC2Q969Z3 335 aa9.05□□□□□ -0.96
PDPN-211ENST00000617617 RNF125Q96EQ8 232 aa9.05□□□□□ -0.96
PDPN-211ENST00000617617 MAP1LC3BQ9GZQ8 125 aa9.05□□□□□ -0.96
PDPN-211ENST00000617617 TMEM14CQ9P0S9 112 aa9.05□□□□□ -0.96
PDPN-211ENST00000617617 A0A1W2PPV4 95 aa9.05□□□□□ -0.96
PDPN-211ENST00000617617 H3BRN7 92 aa9.05□□□□□ -0.96
PDPN-211ENST00000617617 GATA2P23769 480 aaPredicted RBP9.05□□□□□ -0.96
PDPN-211ENST00000617617 GPR183P32249 361 aa9.05□□□□□ -0.96
PDPN-211ENST00000617617 FAM122CQ6P4D5 195 aa9.05□□□□□ -0.96
PDPN-211ENST00000617617 PQLC2Q6ZP29 291 aa9.05□□□□□ -0.96
PDPN-211ENST00000617617 STXBP6Q8NFX7 210 aa9.05□□□□□ -0.96
PDPN-211ENST00000617617 C4orf3Q8WVX3 66 aa9.05□□□□□ -0.96
PDPN-211ENST00000617617 FAM167A-AS1Q96KT0 104 aa9.05□□□□□ -0.96
PDPN-211ENST00000617617 PEF1Q9UBV8 284 aaKnown RBP9.05□□□□□ -0.96
PDPN-211ENST00000617617 HIGD1AQ9Y241 93 aa9.05□□□□□ -0.96
PDPN-211ENST00000617617 ARL3P36405 182 aa9.04□□□□□ -0.96
PDPN-211ENST00000617617 ZNF329Q86UD4 541 aa9.04□□□□□ -0.96
PDPN-211ENST00000617617 GPHB5Q86YW7 130 aa9.04□□□□□ -0.96
PDPN-211ENST00000617617 SHANK2-AS3Q9BTD1 123 aa9.04□□□□□ -0.96
PDPN-211ENST00000617617 SEPSECSQ9HD40 501 aaKnown RBP9.04□□□□□ -0.96
PDPN-211ENST00000617617 ZMAT5Q9UDW3 170 aaKnown RBP9.04□□□□□ -0.96
PDPN-211ENST00000617617 U3KQE9 123 aa9.04□□□□□ -0.96
PDPN-211ENST00000617617 SONP18583 2426 aaKnown RBP9.04□□□□□ -0.96
PDPN-211ENST00000617617 CLPSL1A2RUU4 121 aa9.04□□□□□ -0.96
PDPN-211ENST00000617617 I3L521 148 aa9.04□□□□□ -0.96
PDPN-211ENST00000617617 GGCTO75223 188 aaKnown RBP9.04□□□□□ -0.96
PDPN-211ENST00000617617 RPLP1P05386 114 aaKnown RBP9.04□□□□□ -0.96
PDPN-211ENST00000617617 C8orf88P0DMB2 117 aa9.04□□□□□ -0.96
PDPN-211ENST00000617617 PROK1P58294 105 aa9.04□□□□□ -0.96
PDPN-211ENST00000617617 DEFA5Q01523 94 aa9.04□□□□□ -0.96
PDPN-211ENST00000617617 Q71RC1 249 aaPredicted RBP9.04□□□□□ -0.96
PDPN-211ENST00000617617 SFT2D1Q8WV19 159 aa9.04□□□□□ -0.96
PDPN-211ENST00000617617 SLC25A2Q9BXI2 301 aa9.04□□□□□ -0.96
PDPN-211ENST00000617617 CUBNO60494 3623 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms