RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-223ENST00000617585 STHQ8IWL8 128 aa16.35■□□□□ 0.21
ARHGEF1-223ENST00000617585 OR51G1Q8NGK1 321 aa16.35■□□□□ 0.21
ARHGEF1-223ENST00000617585 SDHCQ99643 169 aaPredicted RBP16.35■□□□□ 0.21
ARHGEF1-223ENST00000617585 C11orf68Q9H3H3 251 aaKnown RBP16.35■□□□□ 0.21
ARHGEF1-223ENST00000617585 NUPR2A6NF83 97 aa16.34■□□□□ 0.21
ARHGEF1-223ENST00000617585 NDUFB6O95139 128 aa16.34■□□□□ 0.21
ARHGEF1-223ENST00000617585 CA1P00915 261 aaPredicted RBP16.34■□□□□ 0.21
ARHGEF1-223ENST00000617585 TMEM41BQ5BJD5 291 aa16.34■□□□□ 0.21
ARHGEF1-223ENST00000617585 OR8G2PQ6IF36 304 aa16.34■□□□□ 0.21
ARHGEF1-223ENST00000617585 RNF125Q96EQ8 232 aa16.34■□□□□ 0.21
ARHGEF1-223ENST00000617585 CIB3Q96Q77 187 aaPredicted RBP16.34■□□□□ 0.21
ARHGEF1-223ENST00000617585 GIG44P09565 113 aaPredicted RBP16.33■□□□□ 0.2
ARHGEF1-223ENST00000617585 ZNF688P0C7X2 276 aa16.33■□□□□ 0.2
ARHGEF1-223ENST00000617585 RAB11AP62491 216 aa16.33■□□□□ 0.2
ARHGEF1-223ENST00000617585 CEMP1Q6PRD7 247 aaPredicted RBP16.33■□□□□ 0.2
ARHGEF1-223ENST00000617585 OR11H2Q8NH07 326 aa16.33■□□□□ 0.2
ARHGEF1-223ENST00000617585 SLC35E1Q96K37 410 aa16.33■□□□□ 0.2
ARHGEF1-223ENST00000617585 CXorf65A6NEN9 183 aa16.32■□□□□ 0.2
ARHGEF1-223ENST00000617585 PRSS46E5RG02 174 aa16.32■□□□□ 0.2
ARHGEF1-223ENST00000617585 SYNGR2O43760 224 aa16.32■□□□□ 0.2
ARHGEF1-223ENST00000617585 SPP1P10451 314 aa16.32■□□□□ 0.2
ARHGEF1-223ENST00000617585 NUP62P37198 522 aaPredicted RBP16.32■□□□□ 0.2
ARHGEF1-223ENST00000617585 DHRS2Q13268 280 aa16.32■□□□□ 0.2
ARHGEF1-223ENST00000617585 GGNBP1Q5YKI7 109 aa16.32■□□□□ 0.2
ARHGEF1-223ENST00000617585 MORN3Q6PF18 240 aaPredicted RBP16.32■□□□□ 0.2
ARHGEF1-223ENST00000617585 TRGV9Q99603 122 aa16.32■□□□□ 0.2
ARHGEF1-223ENST00000617585 NRN1Q9NPD7 142 aa16.32■□□□□ 0.2
ARHGEF1-223ENST00000617585 C9orf170A2RU37 121 aa16.31■□□□□ 0.2
ARHGEF1-223ENST00000617585 ZFP92A6NM28 416 aa16.31■□□□□ 0.2
ARHGEF1-223ENST00000617585 HOXB5P09067 269 aa16.31■□□□□ 0.2
ARHGEF1-223ENST00000617585 IAPPP10997 89 aa16.31■□□□□ 0.2
ARHGEF1-223ENST00000617585 ZNF90Q03938 601 aa16.31■□□□□ 0.2
ARHGEF1-223ENST00000617585 TRIQKQ629K1 86 aa16.31■□□□□ 0.2
ARHGEF1-223ENST00000617585 SIGLEC15Q6ZMC9 328 aa16.31■□□□□ 0.2
ARHGEF1-223ENST00000617585 THAP8Q8NA92 274 aa16.31■□□□□ 0.2
ARHGEF1-223ENST00000617585 IGKV1OR2-108A0A075B7D4 117 aa16.3■□□□□ 0.2
ARHGEF1-223ENST00000617585 FABP1P07148 127 aa16.3■□□□□ 0.2
ARHGEF1-223ENST00000617585 BTCP35070 178 aa16.3■□□□□ 0.2
ARHGEF1-223ENST00000617585 RPP30P78346 268 aaKnown RBP16.3■□□□□ 0.2
ARHGEF1-223ENST00000617585 ID3Q02535 119 aa16.3■□□□□ 0.2
ARHGEF1-223ENST00000617585 PMS2P11Q13670 270 aa16.3■□□□□ 0.2
ARHGEF1-223ENST00000617585 C7orf50Q9BRJ6 194 aaKnown RBP16.3■□□□□ 0.2
ARHGEF1-223ENST00000617585 PFDN2Q9UHV9 154 aa16.3■□□□□ 0.2
ARHGEF1-223ENST00000617585 EPPK1P58107 5090 aaKnown RBP16.29■□□□□ 0.2
ARHGEF1-223ENST00000617585 INPP1P49441 399 aa16.29■□□□□ 0.2
ARHGEF1-223ENST00000617585 C1orf194Q5T5A4 169 aa16.29■□□□□ 0.2
ARHGEF1-223ENST00000617585 RAB40CQ96S21 281 aa16.29■□□□□ 0.2
ARHGEF1-223ENST00000617585 KNCNA6PVL3 124 aa16.28■□□□□ 0.2
ARHGEF1-223ENST00000617585 SNRPGP15A8MWD9 76 aa16.28■□□□□ 0.2
ARHGEF1-223ENST00000617585 SNRPD3P62318 126 aaKnown RBP16.28■□□□□ 0.2
ARHGEF1-223ENST00000617585 LINC00476Q8WZB0 136 aa16.28■□□□□ 0.2
ARHGEF1-223ENST00000617585 MAGT1Q9H0U3 335 aa16.28■□□□□ 0.2
ARHGEF1-223ENST00000617585 NDUFA13Q9P0J0 144 aa16.28■□□□□ 0.2
ARHGEF1-223ENST00000617585 WRBO00258 174 aa16.27■□□□□ 0.2
ARHGEF1-223ENST00000617585 CFDP00746 253 aaPredicted RBP16.27■□□□□ 0.2
ARHGEF1-223ENST00000617585 OR4E1P0C645 316 aa16.27■□□□□ 0.2
ARHGEF1-223ENST00000617585 CNPY1Q3B7I2 92 aa16.27■□□□□ 0.2
ARHGEF1-223ENST00000617585 PSMG4Q5JS54 123 aa16.27■□□□□ 0.2
ARHGEF1-223ENST00000617585 ACTL10Q5JWF8 245 aa16.27■□□□□ 0.2
ARHGEF1-223ENST00000617585 CSNK1G2-AS1Q8NCQ2 148 aa16.27■□□□□ 0.2
ARHGEF1-223ENST00000617585 FLVCR2Q9UPI3 526 aa16.27■□□□□ 0.2
ARHGEF1-223ENST00000617585 KLK5Q9Y337 293 aaPredicted RBP16.27■□□□□ 0.2
ARHGEF1-223ENST00000617585 CENPXA8MT69 81 aa16.26■□□□□ 0.19
ARHGEF1-223ENST00000617585 ZNF705EA8MWA4 302 aaPredicted RBP16.26■□□□□ 0.19
ARHGEF1-223ENST00000617585 ADAP1O75689 374 aa16.26■□□□□ 0.19
ARHGEF1-223ENST00000617585 IL7P13232 177 aa16.26■□□□□ 0.19
ARHGEF1-223ENST00000617585 C4BPBP20851 252 aa16.26■□□□□ 0.19
ARHGEF1-223ENST00000617585 Q8NAQ8 132 aa16.26■□□□□ 0.19
ARHGEF1-223ENST00000617585 OR4D5Q8NGN0 318 aa16.26■□□□□ 0.19
ARHGEF1-223ENST00000617585 COQ8AQ8NI60 647 aa16.26■□□□□ 0.19
ARHGEF1-223ENST00000617585 PHLDA1Q8WV24 401 aaPredicted RBP16.26■□□□□ 0.19
ARHGEF1-223ENST00000617585 PBDC1Q9BVG4 233 aa16.26■□□□□ 0.19
ARHGEF1-223ENST00000617585 FBXL17Q9UF56 701 aa16.26■□□□□ 0.19
ARHGEF1-223ENST00000617585 NKX2-1P43699 371 aaPredicted RBP16.25■□□□□ 0.19
ARHGEF1-223ENST00000617585 MFFQ9GZY8 342 aa16.25■□□□□ 0.19
ARHGEF1-223ENST00000617585 SLC45A2Q9UMX9 530 aa16.25■□□□□ 0.19
ARHGEF1-223ENST00000617585 H3BMM0 161 aa16.24■□□□□ 0.19
ARHGEF1-223ENST00000617585 SPANXN5Q5MJ07 72 aa16.24■□□□□ 0.19
ARHGEF1-223ENST00000617585 C11orf45Q8TAV5 145 aa16.24■□□□□ 0.19
ARHGEF1-223ENST00000617585 STRAPQ9Y3F4 350 aaKnown RBP16.24■□□□□ 0.19
ARHGEF1-223ENST00000617585 SOCS3O14543 225 aa16.23■□□□□ 0.19
ARHGEF1-223ENST00000617585 IFNA21P01568 189 aa16.23■□□□□ 0.19
ARHGEF1-223ENST00000617585 MIFP14174 115 aa16.23■□□□□ 0.19
ARHGEF1-223ENST00000617585 LYZP61626 148 aa16.23■□□□□ 0.19
ARHGEF1-223ENST00000617585 HRH4Q9H3N8 390 aa16.23■□□□□ 0.19
ARHGEF1-223ENST00000617585 PAIP2BQ9ULR5 123 aaKnown RBP16.23■□□□□ 0.19
ARHGEF1-223ENST00000617585 X6R8D5 127 aa16.23■□□□□ 0.19
ARHGEF1-223ENST00000617585 PMS2P5A8MQ11 134 aa16.22■□□□□ 0.19
ARHGEF1-223ENST00000617585 HLA-DRB4P13762 266 aa16.22■□□□□ 0.19
ARHGEF1-223ENST00000617585 ANXA7P20073 488 aaKnown RBP16.22■□□□□ 0.19
ARHGEF1-223ENST00000617585 POLR2GP62487 172 aaKnown RBP eCLIP16.22■□□□□ 0.19
ARHGEF1-223ENST00000617585 OR2F1Q13607 317 aa16.22■□□□□ 0.19
ARHGEF1-223ENST00000617585 TMEM144Q7Z5S9 345 aa16.22■□□□□ 0.19
ARHGEF1-223ENST00000617585 SMIM8Q96KF7 97 aa16.22■□□□□ 0.19
ARHGEF1-223ENST00000617585 CLUHP3Q96NS8 147 aa16.22■□□□□ 0.19
ARHGEF1-223ENST00000617585 HLA-DRB4X5D2U9 266 aa16.22■□□□□ 0.19
ARHGEF1-223ENST00000617585 KMT2AQ03164 3969 aa16.22■□□□□ 0.19
ARHGEF1-223ENST00000617585 LINC00854A0A1B0GVQ3 168 aa16.21■□□□□ 0.19
ARHGEF1-223ENST00000617585 PLA2G10O15496 165 aa16.21■□□□□ 0.19
ARHGEF1-223ENST00000617585 PSMB3P49720 205 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms