RNA–Protein interactions for RNA: ENST00000616401.1

SOX2-OT-236, SOX2 overlapping transcript, humanhuman

Gene SOX2-OT, Length 69 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-236ENST00000616401 NAPAP54920 295 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 RGS8P57771 180 aaPredicted RBP-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 YBEYP58557 167 aaPredicted RBP-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 RHBDL3P58872 404 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 ARF6P62330 175 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 RPL10AP62906 217 aaKnown RBP-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 KRR1Q13601 381 aaKnown RBP-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 TFDP2Q14188 446 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 PPP2R5AQ15172 486 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 CEACAM16Q2WEN9 425 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 UBE2NLQ5JXB2 153 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 SPATA1Q5VX52 437 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 NDUFAF7Q7L592 441 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 LPCAT2Q7L5N7 544 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 SSX8Q7RTT4 187 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 ERASQ7Z444 233 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 ARPINQ7Z6K5 226 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 BAGE3Q86Y29 109 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 SLC38A6Q8IZM9 456 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 C4orf33Q8N1A6 199 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 FAM133AQ8N9E0 248 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 OR5D14Q8NGL3 314 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 KIF18AQ8NI77 898 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 MRPL30Q8TCC3 161 aaKnown RBP-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 CA5BP1Q8WTZ4 195 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 PTPMT1Q8WUK0 201 aaPredicted RBP-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 SMIM4Q8WVI0 70 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 PIBF1Q8WXW3 757 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 TMEM234Q8WY98 164 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 LINC00615Q96LM1 132 aaPredicted RBP-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 PACRGQ96M98 296 aaPredicted RBP-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 RNF2Q99496 336 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 MED18Q9BUE0 208 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 TMED9Q9BVK6 235 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 WDR61Q9GZS3 305 aaKnown RBP-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 STMN4Q9H169 189 aaPredicted RBP-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 SLC35B3Q9H1N7 401 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 ANKRD19PQ9H560 264 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 NOP10Q9NPE3 64 aaKnown RBP-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 TMEM9BQ9NQ34 198 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 EURLQ9NYK6 297 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 CPSF2Q9P2I0 782 aaKnown RBP-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 RABL2AQ9UBK7 228 aaPredicted RBP-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 NOL12Q9UGY1 213 aaKnown RBP eCLIP-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 SLC24A2Q9UI40 661 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 PSORS1C1Q9UIG5 152 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 C3orf18Q9UK00 162 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 GOLT1BQ9Y3E0 138 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 AP1M2Q9Y6Q5 423 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 A2ML1A8K2U0 1454 aa-1.72□□□□□ -2.68
SOX2-OT-236ENST00000616401 ARHGEF28Q8N1W1 1705 aaKnown RBP-1.72□□□□□ -2.69
SOX2-OT-236ENST00000616401 RGPD8O14715 1765 aaPredicted RBP-1.72□□□□□ -2.69
SOX2-OT-236ENST00000616401 RGPD5Q99666 1765 aa-1.72□□□□□ -2.69
SOX2-OT-236ENST00000616401 SBNO2Q9Y2G9 1366 aa-1.72□□□□□ -2.69
SOX2-OT-236ENST00000616401 RAPGEF6Q8TEU7 1601 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 A0A096LPI6 279 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 TRGV10A0A0A0MS01 117 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 TRAV3A0A0B4J244 114 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 ZNF816-ZNF321PA0A0X1KG74 233 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 TINCRA0A1B0GVN0 87 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 GOLGA8JA6NMD2 632 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 HMGB1P1B2RPK0 211 aaPredicted RBP-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 GOLGA8KD6RF30 607 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 GOLGA8RI6L899 631 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 M0R381 172 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 EIF3FO00303 357 aaPredicted RBP-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 CXCR6O00574 342 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 LEPROTO15243 131 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 OR1F1O43749 312 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 SSX5O60225 188 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 DHRS3O75911 302 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 FLOT1O75955 427 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 CA2P00918 260 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 CST1P01037 141 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 PTHP01270 115 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 HLA-DQB2P05538 268 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 RPS17P08708 135 aaKnown RBP-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 GGT1P19440 569 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 CDK2P24941 298 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 CASP4P49662 377 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 PSMB2P49721 201 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 GEMP55040 296 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 RAB38P57729 211 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 SNAP25P60880 206 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 RRAS2P62070 204 aaPredicted RBP-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 TBPL1P62380 186 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 DEFA6Q01524 100 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 GOLGA8DPQ0D2H9 430 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 MAPK14Q16539 360 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 MAPK6Q16659 721 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 Q499Y3 187 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 CCDC40Q4G0X9 1142 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 CCDC184Q52MB2 194 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 C9orf116Q5BN46 136 aaPredicted RBP-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 NMSQ5H8A3 153 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 HACD4Q5VWC8 232 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 JAKMIP3Q5VZ66 844 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 PLCXD3Q63HM9 321 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 LPCAT3Q6P1A2 487 aa-1.73□□□□□ -2.69
SOX2-OT-236ENST00000616401 LRRN1Q6UXK5 716 aa-1.73□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms