RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 DEDDO75618 318 aa14.01□□□□□ -0.17
CDX1-202ENST00000616154 NXPH3O95157 252 aa14.01□□□□□ -0.17
CDX1-202ENST00000616154 LY6G6CO95867 125 aa14.01□□□□□ -0.17
CDX1-202ENST00000616154 HTR2BP41595 481 aa14.01□□□□□ -0.17
CDX1-202ENST00000616154 TCTE3Q8IZS6 198 aa14.01□□□□□ -0.17
CDX1-202ENST00000616154 STPG3Q8N7X2 389 aa14.01□□□□□ -0.17
CDX1-202ENST00000616154 RNF183Q96D59 192 aa14.01□□□□□ -0.17
CDX1-202ENST00000616154 SMIM8Q96KF7 97 aa14.01□□□□□ -0.17
CDX1-202ENST00000616154 CIB3Q96Q77 187 aaPredicted RBP14.01□□□□□ -0.17
CDX1-202ENST00000616154 C20orf24Q9BUV8 137 aa14.01□□□□□ -0.17
CDX1-202ENST00000616154 RNF126Q9BV68 326 aa14.01□□□□□ -0.17
CDX1-202ENST00000616154 MAGT1Q9H0U3 335 aa14.01□□□□□ -0.17
CDX1-202ENST00000616154 ENY2Q9NPA8 101 aa14.01□□□□□ -0.17
CDX1-202ENST00000616154 IGHV7-4-1A0A0J9YVY3 117 aa14□□□□□ -0.17
CDX1-202ENST00000616154 CEBPZOSA8MTT3 80 aa14□□□□□ -0.17
CDX1-202ENST00000616154 SCGB1D2O95969 90 aa14□□□□□ -0.17
CDX1-202ENST00000616154 IGHV3-48P01763 117 aa14□□□□□ -0.17
CDX1-202ENST00000616154 C2orf83Q53S99 150 aa14□□□□□ -0.17
CDX1-202ENST00000616154 CEMP1Q6PRD7 247 aaPredicted RBP14□□□□□ -0.17
CDX1-202ENST00000616154 OR4X1Q8NH49 305 aa14□□□□□ -0.17
CDX1-202ENST00000616154 IGHV3OR16-8A0A075B7F1 116 aa13.99□□□□□ -0.17
CDX1-202ENST00000616154 CHEK1O14757 476 aa13.99□□□□□ -0.17
CDX1-202ENST00000616154 CCNKO75909 580 aa13.99□□□□□ -0.17
CDX1-202ENST00000616154 ATP5IP56385 69 aaPredicted RBP13.99□□□□□ -0.17
CDX1-202ENST00000616154 FGL1Q08830 312 aa13.99□□□□□ -0.17
CDX1-202ENST00000616154 Q5BKY6 102 aa13.99□□□□□ -0.17
CDX1-202ENST00000616154 PRSS54Q6PEW0 395 aa13.99□□□□□ -0.17
CDX1-202ENST00000616154 ZNF600Q6ZNG1 722 aa13.99□□□□□ -0.17
CDX1-202ENST00000616154 AKAP14Q86UN6 197 aa13.99□□□□□ -0.17
CDX1-202ENST00000616154 OR2T35Q8NGX2 323 aa13.99□□□□□ -0.17
CDX1-202ENST00000616154 ZFAND3Q9H8U3 227 aa13.99□□□□□ -0.17
CDX1-202ENST00000616154 MRPL36Q9P0J6 103 aaKnown RBP13.99□□□□□ -0.17
CDX1-202ENST00000616154 WRBO00258 174 aa13.98□□□□□ -0.17
CDX1-202ENST00000616154 ZNF207O43670 478 aaKnown RBP13.98□□□□□ -0.17
CDX1-202ENST00000616154 SSSCA1O60232 199 aa13.98□□□□□ -0.17
CDX1-202ENST00000616154 CLN5O75503 358 aa13.98□□□□□ -0.17
CDX1-202ENST00000616154 PET100P0DJ07 73 aa13.98□□□□□ -0.17
CDX1-202ENST00000616154 RPL35AP18077 110 aaKnown RBP13.98□□□□□ -0.17
CDX1-202ENST00000616154 FAM90A2PQ658T7 463 aa13.98□□□□□ -0.17
CDX1-202ENST00000616154 TOMM20LQ6UXN7 152 aa13.98□□□□□ -0.17
CDX1-202ENST00000616154 TMEM217Q8N7C4 229 aa13.98□□□□□ -0.17
CDX1-202ENST00000616154 TMEM116Q8NCL8 245 aa13.98□□□□□ -0.17
CDX1-202ENST00000616154 RNASEH2CQ8TDP1 164 aaKnown RBP13.98□□□□□ -0.17
CDX1-202ENST00000616154 TMEM170AQ8WVE7 144 aa13.98□□□□□ -0.17
CDX1-202ENST00000616154 RHPN1-AS1Q9BWJ2 59 aa13.98□□□□□ -0.17
CDX1-202ENST00000616154 MAP6D1Q9H9H5 199 aa13.98□□□□□ -0.17
CDX1-202ENST00000616154 HEYLQ9NQ87 328 aaPredicted RBP13.98□□□□□ -0.17
CDX1-202ENST00000616154 OR5AC2Q9NZP5 309 aa13.98□□□□□ -0.17
CDX1-202ENST00000616154 LSM5Q9Y4Y9 91 aaKnown RBP13.98□□□□□ -0.17
CDX1-202ENST00000616154 U3KQ87 197 aa13.98□□□□□ -0.17
CDX1-202ENST00000616154 TSC22D2O75157 780 aa13.97□□□□□ -0.17
CDX1-202ENST00000616154 IAPPP10997 89 aa13.97□□□□□ -0.17
CDX1-202ENST00000616154 SLC25A4P12235 298 aa13.97□□□□□ -0.17
CDX1-202ENST00000616154 OPRK1P41145 380 aa13.97□□□□□ -0.17
CDX1-202ENST00000616154 S100A10P60903 97 aa13.97□□□□□ -0.17
CDX1-202ENST00000616154 LRRC37A5PQ49AS3 106 aa13.97□□□□□ -0.17
CDX1-202ENST00000616154 SLC24A4Q8NFF2 622 aa13.97□□□□□ -0.17
CDX1-202ENST00000616154 RNF2Q99496 336 aa13.97□□□□□ -0.17
CDX1-202ENST00000616154 GINS3Q9BRX5 216 aa13.97□□□□□ -0.17
CDX1-202ENST00000616154 VSIRQ9H7M9 311 aa13.97□□□□□ -0.17
CDX1-202ENST00000616154 KLK5Q9Y337 293 aaPredicted RBP13.97□□□□□ -0.17
CDX1-202ENST00000616154 RPS10-NUDT3A0A1W2PQS6 291 aa13.96□□□□□ -0.17
CDX1-202ENST00000616154 E5RGE8 158 aa13.96□□□□□ -0.17
CDX1-202ENST00000616154 YIF1AO95070 293 aa13.96□□□□□ -0.17
CDX1-202ENST00000616154 IGKV1-17P01599 117 aa13.96□□□□□ -0.17
CDX1-202ENST00000616154 RLN2P04090 185 aa13.96□□□□□ -0.17
CDX1-202ENST00000616154 CD5P06127 495 aa13.96□□□□□ -0.17
CDX1-202ENST00000616154 LYRM2Q9NU23 88 aaPredicted RBP13.96□□□□□ -0.17
CDX1-202ENST00000616154 MBD2Q9UBB5 411 aa13.96□□□□□ -0.17
CDX1-202ENST00000616154 PUS1Q9Y606 427 aaKnown RBP eCLIP13.96□□□□□ -0.17
CDX1-202ENST00000616154 PVALBP20472 110 aaPredicted RBP13.95□□□□□ -0.18
CDX1-202ENST00000616154 CD300CQ08708 224 aa13.95□□□□□ -0.18
CDX1-202ENST00000616154 MLANAQ16655 118 aa13.95□□□□□ -0.18
CDX1-202ENST00000616154 TMEM14EPQ6UXP3 125 aa13.95□□□□□ -0.18
CDX1-202ENST00000616154 TRAV30A0A087WSZ9 112 aa13.94□□□□□ -0.18
CDX1-202ENST00000616154 NPY1RP25929 384 aa13.94□□□□□ -0.18
CDX1-202ENST00000616154 P2RY1P47900 373 aa13.94□□□□□ -0.18
CDX1-202ENST00000616154 CMC4P56277 68 aaPredicted RBP13.94□□□□□ -0.18
CDX1-202ENST00000616154 NOXA1Q86UR1 476 aa13.94□□□□□ -0.18
CDX1-202ENST00000616154 APRG1Q8IVJ8 170 aa13.94□□□□□ -0.18
CDX1-202ENST00000616154 PSENENQ9NZ42 101 aa13.94□□□□□ -0.18
CDX1-202ENST00000616154 PMS2P5A8MQ11 134 aa13.93□□□□□ -0.18
CDX1-202ENST00000616154 SMLR1H3BR10 107 aa13.93□□□□□ -0.18
CDX1-202ENST00000616154 L7N2F9 121 aa13.93□□□□□ -0.18
CDX1-202ENST00000616154 SCGB2A1O75556 95 aa13.93□□□□□ -0.18
CDX1-202ENST00000616154 IGLC1P0CG04 106 aa13.93□□□□□ -0.18
CDX1-202ENST00000616154 VAMP2P63027 116 aa13.93□□□□□ -0.18
CDX1-202ENST00000616154 THAP6Q8TBB0 222 aa13.93□□□□□ -0.18
CDX1-202ENST00000616154 STRAPQ9Y3F4 350 aaKnown RBP13.93□□□□□ -0.18
CDX1-202ENST00000616154 TRAV2A0A0B4J234 112 aa13.92□□□□□ -0.18
CDX1-202ENST00000616154 PRSS46E5RG02 174 aa13.92□□□□□ -0.18
CDX1-202ENST00000616154 C1QBP02746 253 aa13.92□□□□□ -0.18
CDX1-202ENST00000616154 RPP30P78346 268 aaKnown RBP13.92□□□□□ -0.18
CDX1-202ENST00000616154 ZNF124Q15973 351 aa13.92□□□□□ -0.18
CDX1-202ENST00000616154 TMEM252Q8N6L7 170 aa13.92□□□□□ -0.18
CDX1-202ENST00000616154 OR11H4Q8NGC9 324 aa13.92□□□□□ -0.18
CDX1-202ENST00000616154 GATAD1Q8WUU5 269 aa13.92□□□□□ -0.18
CDX1-202ENST00000616154 CSTL1Q9H114 145 aa13.92□□□□□ -0.18
CDX1-202ENST00000616154 IGHV3-49A0A0A0MS15 119 aa13.91□□□□□ -0.18
CDX1-202ENST00000616154 HMSDA8MTL9 139 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms