RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 RNFT1Q5M7Z0 435 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 BVES-AS1Q5T3Y7 98 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 SLC25A33Q9BSK2 321 aa10.72□□□□□ -0.69
MSH6-214ENST00000616033 DSCAMO60469 2012 aa10.71□□□□□ -0.69
MSH6-214ENST00000616033 IGKV1D-17A0A075B6S4 117 aa10.71□□□□□ -0.69
MSH6-214ENST00000616033 H0YJW9 148 aa10.71□□□□□ -0.69
MSH6-214ENST00000616033 HCP5Q6MZN7 132 aa10.71□□□□□ -0.69
MSH6-214ENST00000616033 COMMD5Q9GZQ3 224 aa10.71□□□□□ -0.69
MSH6-214ENST00000616033 F11RQ9Y624 299 aaKnown RBP10.71□□□□□ -0.69
MSH6-214ENST00000616033 A0A1B0GV72 72 aa10.71□□□□□ -0.69
MSH6-214ENST00000616033 SYS1-DBNDD2H3BUS1 97 aa10.71□□□□□ -0.69
MSH6-214ENST00000616033 PEX7O00628 323 aa10.71□□□□□ -0.69
MSH6-214ENST00000616033 SS18L2Q9UHA2 77 aa10.71□□□□□ -0.69
MSH6-214ENST00000616033 TRGV5A0A0B4J1U4 118 aa10.71□□□□□ -0.7
MSH6-214ENST00000616033 IGHV1-24A0A0C4DH33 117 aa10.71□□□□□ -0.7
MSH6-214ENST00000616033 DHRS13Q6UX07 377 aa10.71□□□□□ -0.7
MSH6-214ENST00000616033 Q71RC1 249 aaPredicted RBP10.71□□□□□ -0.7
MSH6-214ENST00000616033 HES4Q9HCC6 221 aa10.71□□□□□ -0.7
MSH6-214ENST00000616033 TMSB15BA0A087X1C1 80 aa10.7□□□□□ -0.7
MSH6-214ENST00000616033 IQCF6A8MYZ5 107 aa10.7□□□□□ -0.7
MSH6-214ENST00000616033 RBPJQ06330 500 aa10.7□□□□□ -0.7
MSH6-214ENST00000616033 ANXA2RQ3ZCQ2 193 aa10.7□□□□□ -0.7
MSH6-214ENST00000616033 LRRC10Q5BKY1 277 aa10.7□□□□□ -0.7
MSH6-214ENST00000616033 C10orf113Q5VZT2 155 aa10.7□□□□□ -0.7
MSH6-214ENST00000616033 PNKDQ8N490 385 aa10.7□□□□□ -0.7
MSH6-214ENST00000616033 TMEM191AQ9H0A3 160 aa10.7□□□□□ -0.7
MSH6-214ENST00000616033 SPRR3Q9UBC9 169 aa10.7□□□□□ -0.7
MSH6-214ENST00000616033 TSSC4Q9Y5U2 329 aaPredicted RBP10.7□□□□□ -0.7
MSH6-214ENST00000616033 IGHV3-72A0A0B4J1Y9 119 aa10.7□□□□□ -0.7
MSH6-214ENST00000616033 TMEM249Q2WGJ8 235 aa10.7□□□□□ -0.7
MSH6-214ENST00000616033 LINC00322Q6ZN03 302 aaPredicted RBP10.7□□□□□ -0.7
MSH6-214ENST00000616033 C19orf24Q9BVV8 132 aa10.7□□□□□ -0.7
MSH6-214ENST00000616033 K7EQM0 130 aa10.7□□□□□ -0.7
MSH6-214ENST00000616033 HTR1DP28221 377 aa10.7□□□□□ -0.7
MSH6-214ENST00000616033 ARF6P62330 175 aa10.7□□□□□ -0.7
MSH6-214ENST00000616033 ZGRF1Q86YA3 2104 aa10.69□□□□□ -0.7
MSH6-214ENST00000616033 SERTM2A0A1B0GWG4 89 aa10.69□□□□□ -0.7
MSH6-214ENST00000616033 E7EUB6 86 aa10.69□□□□□ -0.7
MSH6-214ENST00000616033 CECR9P0C854 216 aa10.69□□□□□ -0.7
MSH6-214ENST00000616033 URB1-AS1Q96HZ7 61 aa10.69□□□□□ -0.7
MSH6-214ENST00000616033 IGF2BP2-AS1Q96M15 143 aa10.69□□□□□ -0.7
MSH6-214ENST00000616033 CCL13Q99616 98 aa10.69□□□□□ -0.7
MSH6-214ENST00000616033 TMUB1Q9BVT8 246 aa10.69□□□□□ -0.7
MSH6-214ENST00000616033 MAP1LC3CQ9BXW4 147 aa10.69□□□□□ -0.7
MSH6-214ENST00000616033 DMXL1Q9Y485 3027 aa10.69□□□□□ -0.7
MSH6-214ENST00000616033 TEX48A0A1B0GUV7 120 aa10.69□□□□□ -0.7
MSH6-214ENST00000616033 P01737 135 aa10.69□□□□□ -0.7
MSH6-214ENST00000616033 HIST1H1EP10412 219 aaKnown RBP10.69□□□□□ -0.7
MSH6-214ENST00000616033 COX19Q49B96 90 aa10.69□□□□□ -0.7
MSH6-214ENST00000616033 LINC00305Q7Z4B0 112 aa10.69□□□□□ -0.7
MSH6-214ENST00000616033 GRAMD2BQ96HH9 432 aa10.69□□□□□ -0.7
MSH6-214ENST00000616033 SLC25A2Q9BXI2 301 aa10.69□□□□□ -0.7
MSH6-214ENST00000616033 LY96Q9Y6Y9 160 aa10.69□□□□□ -0.7
MSH6-214ENST00000616033 TEX50A0A1B0GTY4 177 aa10.68□□□□□ -0.7
MSH6-214ENST00000616033 ENSAO43768 121 aaKnown RBP10.68□□□□□ -0.7
MSH6-214ENST00000616033 CFAP161Q6P656 301 aa10.68□□□□□ -0.7
MSH6-214ENST00000616033 PRSS57Q6UWY2 283 aa10.68□□□□□ -0.7
MSH6-214ENST00000616033 MRPL27Q9P0M9 148 aaKnown RBP10.68□□□□□ -0.7
MSH6-214ENST00000616033 ABCA4P78363 2273 aa10.68□□□□□ -0.7
MSH6-214ENST00000616033 hADV38S2A0JD32 116 aa10.68□□□□□ -0.7
MSH6-214ENST00000616033 PDPNQ86YL7 162 aa10.68□□□□□ -0.7
MSH6-214ENST00000616033 PPP1R35Q8TAP8 253 aa10.68□□□□□ -0.7
MSH6-214ENST00000616033 HARBI1Q96MB7 349 aa10.68□□□□□ -0.7
MSH6-214ENST00000616033 PEF1Q9UBV8 284 aaKnown RBP10.68□□□□□ -0.7
MSH6-214ENST00000616033 AKAP6Q13023 2319 aa10.68□□□□□ -0.7
MSH6-214ENST00000616033 C19orf67A6NJJ6 358 aa10.68□□□□□ -0.7
MSH6-214ENST00000616033 CNIH1O95406 144 aa10.68□□□□□ -0.7
MSH6-214ENST00000616033 SAA1P0DJI8 122 aaPredicted RBP10.68□□□□□ -0.7
MSH6-214ENST00000616033 HBBP68871 147 aa10.68□□□□□ -0.7
MSH6-214ENST00000616033 CIARTQ8N365 385 aaPredicted RBP10.68□□□□□ -0.7
MSH6-214ENST00000616033 FAM216BQ8N7L0 139 aa10.68□□□□□ -0.7
MSH6-214ENST00000616033 WDR31Q8NA23 367 aa10.68□□□□□ -0.7
MSH6-214ENST00000616033 KLRC4-KLRK1H3BQV0 150 aa10.67□□□□□ -0.7
MSH6-214ENST00000616033 COL8A1P27658 744 aa10.67□□□□□ -0.7
MSH6-214ENST00000616033 LOXL3P58215 753 aa10.67□□□□□ -0.7
MSH6-214ENST00000616033 PRNTQ86SH4 94 aa10.67□□□□□ -0.7
MSH6-214ENST00000616033 BPIFA4PQ86YQ2 179 aa10.67□□□□□ -0.7
MSH6-214ENST00000616033 ZCCHC24Q8N2G6 241 aaKnown RBP10.67□□□□□ -0.7
MSH6-214ENST00000616033 JPT1Q9UK76 154 aa10.67□□□□□ -0.7
MSH6-214ENST00000616033 MGST3O14880 152 aa10.67□□□□□ -0.7
MSH6-214ENST00000616033 CYC1P08574 325 aa10.67□□□□□ -0.7
MSH6-214ENST00000616033 TMPRSS3P57727 454 aa10.67□□□□□ -0.7
MSH6-214ENST00000616033 ITLN1Q8WWA0 313 aa10.67□□□□□ -0.7
MSH6-214ENST00000616033 TNFSF15O95150 251 aa10.67□□□□□ -0.7
MSH6-214ENST00000616033 OR5AL1P0C617 328 aa10.67□□□□□ -0.7
MSH6-214ENST00000616033 GPR183P32249 361 aa10.67□□□□□ -0.7
MSH6-214ENST00000616033 MC5RP33032 325 aa10.67□□□□□ -0.7
MSH6-214ENST00000616033 C12orf54Q6X4T0 127 aa10.67□□□□□ -0.7
MSH6-214ENST00000616033 GCSAMQ8N6F7 178 aa10.67□□□□□ -0.7
MSH6-214ENST00000616033 PRSS3P2Q8NHM4 247 aa10.67□□□□□ -0.7
MSH6-214ENST00000616033 SIGMAR1Q99720 223 aa10.67□□□□□ -0.7
MSH6-214ENST00000616033 TMEM14BQ9NUH8 114 aa10.67□□□□□ -0.7
MSH6-214ENST00000616033 MRPL36Q9P0J6 103 aaKnown RBP10.67□□□□□ -0.7
MSH6-214ENST00000616033 SLC25A10Q9UBX3 287 aaPredicted RBP10.67□□□□□ -0.7
MSH6-214ENST00000616033 SPCS1Q9Y6A9 102 aa10.67□□□□□ -0.7
MSH6-214ENST00000616033 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.66□□□□□ -0.7
MSH6-214ENST00000616033 M0R1B8 84 aa10.66□□□□□ -0.7
MSH6-214ENST00000616033 ATP5G2Q06055 141 aa10.66□□□□□ -0.7
MSH6-214ENST00000616033 ZNF329Q86UD4 541 aa10.66□□□□□ -0.7
MSH6-214ENST00000616033 ERHP84090 104 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms