RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 SLC25A2Q9BXI2 301 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 KLK15Q9H2R5 256 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 OTORQ9NRC9 128 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 A0A1W2PRX2 142 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 C5orf52A6NGY3 159 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 GPX1P07203 203 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 IL15RAQ13261 267 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 Q6ZPA2 131 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 LINC01551Q86U37 167 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 C8orf46Q8TAG6 207 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 Q8TCH9 128 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 DMRT1Q9Y5R6 373 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 COMPP49747 757 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 ATP5IP56385 69 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 ZDBF2Q9HCK1 2354 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 TRBV9A0A0B4J1U6 114 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 SRRM4A7MD48 611 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 IGLV2-14P01704 120 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 ZNF25P17030 456 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 Q6ZSR3 168 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 CIARTQ8N365 385 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 RITA1Q96K30 269 aa7.24□□□□□ -1.25
PDLIM5-222ENST00000615540 NDPQ00604 133 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 ZNF329Q86UD4 541 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 TMEM167AQ8TBQ9 72 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 SLC25A39Q9BZJ4 359 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 MUC3AQ02505 3323 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 A0A1W2PPI3 338 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 IFITM10A6NMD0 228 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 NUDT10Q8NFP7 164 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 DEFB104AQ8WTQ1 72 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 NUDT11Q96G61 164 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 ATG101Q9BSB4 218 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 TMEM14BQ9NUH8 114 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 CDC42EP3Q9UKI2 254 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 SIGLEC9Q9Y336 463 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 ATG2AQ2TAZ0 1938 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 PMS2P5A8MQ11 134 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 C10orf142B7Z368 130 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 LEPROTL1O95214 131 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 OR4C5Q8NGB2 326 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 SHISA9B4DS77 424 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 GATA4P43694 442 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 DUX5Q96PT3 197 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 A0A1B0GUS0 222 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 SNAI2O43623 268 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 NBL1P41271 181 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 IGFL2Q6UWQ7 119 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 CENPVQ7Z7K6 275 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 BPESC1Q9GZL8 116 aa7.23□□□□□ -1.25
PDLIM5-222ENST00000615540 LOXP28300 417 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-222ENST00000615540 ACTL10Q5JWF8 245 aa7.22□□□□□ -1.25
PDLIM5-222ENST00000615540 HIST3H2BBQ8N257 126 aa7.22□□□□□ -1.25
PDLIM5-222ENST00000615540 MYOZ3Q8TDC0 251 aa7.22□□□□□ -1.25
PDLIM5-222ENST00000615540 PARD6GQ9BYG4 376 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-222ENST00000615540 F11RQ9Y624 299 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-222ENST00000615540 TGFAP01135 160 aa7.22□□□□□ -1.25
PDLIM5-222ENST00000615540 FAM74A4Q5TZK3 123 aa7.22□□□□□ -1.25
PDLIM5-222ENST00000615540 C18orf15Q96N68 181 aa7.22□□□□□ -1.25
PDLIM5-222ENST00000615540 APOHP02749 345 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-222ENST00000615540 EBLN2Q6P2I7 272 aa7.22□□□□□ -1.25
PDLIM5-222ENST00000615540 FRYLO94915 3013 aa7.22□□□□□ -1.25
PDLIM5-222ENST00000615540 FAM120AOSQ5T036 256 aa7.22□□□□□ -1.25
PDLIM5-222ENST00000615540 TEX36Q5VZQ5 186 aa7.22□□□□□ -1.25
PDLIM5-222ENST00000615540 A0A1W2PS18 150 aa7.22□□□□□ -1.25
PDLIM5-222ENST00000615540 VDAC2P45880 294 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-222ENST00000615540 MSMPQ1L6U9 139 aa7.22□□□□□ -1.25
PDLIM5-222ENST00000615540 PHLDA3Q9Y5J5 127 aa7.22□□□□□ -1.25
PDLIM5-222ENST00000615540 C10orf91Q5T1B1 145 aa7.21□□□□□ -1.25
PDLIM5-222ENST00000615540 HIST1H2BLQ99880 126 aa7.21□□□□□ -1.25
PDLIM5-222ENST00000615540 PMCHL2Q9BQD1 86 aa7.21□□□□□ -1.25
PDLIM5-222ENST00000615540 CTSZQ9UBR2 303 aa7.21□□□□□ -1.25
PDLIM5-222ENST00000615540 POLEQ07864 2286 aa7.21□□□□□ -1.25
PDLIM5-222ENST00000615540 TRAV8-1A0A0A6YYK1 113 aa7.21□□□□□ -1.25
PDLIM5-222ENST00000615540 NUDT3O95989 172 aa7.21□□□□□ -1.25
PDLIM5-222ENST00000615540 EFNA4P52798 201 aa7.21□□□□□ -1.25
PDLIM5-222ENST00000615540 FXYD7P58549 80 aa7.21□□□□□ -1.25
PDLIM5-222ENST00000615540 C15orf32Q32M92 178 aa7.21□□□□□ -1.25
PDLIM5-222ENST00000615540 CEACAM4O75871 244 aa7.21□□□□□ -1.26
PDLIM5-222ENST00000615540 C14orf144Q96I85 54 aa7.21□□□□□ -1.26
PDLIM5-222ENST00000615540 IGLV3-9A0A075B6K5 115 aa7.21□□□□□ -1.26
PDLIM5-222ENST00000615540 M0R381 172 aa7.21□□□□□ -1.26
PDLIM5-222ENST00000615540 LAMA5O15230 3695 aa7.21□□□□□ -1.26
PDLIM5-222ENST00000615540 FAM106AQ4KMX7 169 aa7.21□□□□□ -1.26
PDLIM5-222ENST00000615540 NDUFA4L2Q9NRX3 87 aa7.21□□□□□ -1.26
PDLIM5-222ENST00000615540 TNRC6AQ8NDV7 1962 aaKnown RBP7.21□□□□□ -1.26
PDLIM5-222ENST00000615540 EVI2AP22794 236 aa7.21□□□□□ -1.26
PDLIM5-222ENST00000615540 TMEM155Q4W5P6 130 aa7.21□□□□□ -1.26
PDLIM5-222ENST00000615540 PVRIGQ6DKI7 326 aa7.21□□□□□ -1.26
PDLIM5-222ENST00000615540 HIST2H2BDQ6DRA6 164 aa7.21□□□□□ -1.26
PDLIM5-222ENST00000615540 FAM71F2Q6NXP2 309 aa7.21□□□□□ -1.26
PDLIM5-222ENST00000615540 ZNF114Q8NC26 417 aa7.21□□□□□ -1.26
PDLIM5-222ENST00000615540 TNFRSF14Q92956 283 aa7.21□□□□□ -1.26
PDLIM5-222ENST00000615540 C7orf71A4D174 169 aa7.2□□□□□ -1.26
PDLIM5-222ENST00000615540 Q1RN00 199 aa7.2□□□□□ -1.26
PDLIM5-222ENST00000615540 UTF1Q5T230 341 aa7.2□□□□□ -1.26
PDLIM5-222ENST00000615540 ZNF600Q6ZNG1 722 aa7.2□□□□□ -1.26
PDLIM5-222ENST00000615540 TMEM256Q8N2U0 113 aa7.2□□□□□ -1.26
PDLIM5-222ENST00000615540 Q8TAT8 98 aa7.2□□□□□ -1.26
PDLIM5-222ENST00000615540 MAP1LC3AQ9H492 121 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms