RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 SRRQ9GZT4 340 aa12.69□□□□□ -0.38
PRKN-209ENST00000612485 SLC25A21Q9BQT8 299 aaPredicted RBP12.68□□□□□ -0.38
PRKN-209ENST00000612485 KNCNA6PVL3 124 aa12.67□□□□□ -0.38
PRKN-209ENST00000612485 PSG1P11464 419 aa12.67□□□□□ -0.38
PRKN-209ENST00000612485 GPX4P36969 197 aaPredicted RBP12.67□□□□□ -0.38
PRKN-209ENST00000612485 NUP62P37198 522 aaPredicted RBP12.67□□□□□ -0.38
PRKN-209ENST00000612485 OR51G1Q8NGK1 321 aa12.67□□□□□ -0.38
PRKN-209ENST00000612485 SLC35E1Q96K37 410 aa12.67□□□□□ -0.38
PRKN-209ENST00000612485 SEPSECSQ9HD40 501 aaKnown RBP12.67□□□□□ -0.38
PRKN-209ENST00000612485 PFDN2Q9UHV9 154 aa12.67□□□□□ -0.38
PRKN-209ENST00000612485 BUB3O43684 328 aa12.66□□□□□ -0.38
PRKN-209ENST00000612485 VAMP1P23763 118 aa12.66□□□□□ -0.38
PRKN-209ENST00000612485 NANOS2P60321 138 aaKnown RBP12.66□□□□□ -0.38
PRKN-209ENST00000612485 SNRPD3P62318 126 aaKnown RBP12.66□□□□□ -0.38
PRKN-209ENST00000612485 BAK1Q16611 211 aa12.66□□□□□ -0.38
PRKN-209ENST00000612485 CNPY1Q3B7I2 92 aa12.66□□□□□ -0.38
PRKN-209ENST00000612485 PSMG4Q5JS54 123 aa12.66□□□□□ -0.38
PRKN-209ENST00000612485 ACTL10Q5JWF8 245 aa12.66□□□□□ -0.38
PRKN-209ENST00000612485 SIGLEC15Q6ZMC9 328 aa12.66□□□□□ -0.38
PRKN-209ENST00000612485 LRTM2Q8N967 370 aa12.66□□□□□ -0.38
PRKN-209ENST00000612485 RNF125Q96EQ8 232 aa12.66□□□□□ -0.38
PRKN-209ENST00000612485 NRN1Q9NPD7 142 aa12.66□□□□□ -0.38
PRKN-209ENST00000612485 ZFP92A6NM28 416 aa12.65□□□□□ -0.38
PRKN-209ENST00000612485 PITX3O75364 302 aa12.65□□□□□ -0.38
PRKN-209ENST00000612485 FABP1P07148 127 aa12.65□□□□□ -0.38
PRKN-209ENST00000612485 SLC25A6P12236 298 aa12.65□□□□□ -0.38
PRKN-209ENST00000612485 RAB11AP62491 216 aa12.65□□□□□ -0.38
PRKN-209ENST00000612485 GAMTQ14353 236 aa12.65□□□□□ -0.38
PRKN-209ENST00000612485 OR8G2PQ6IF36 304 aa12.65□□□□□ -0.38
PRKN-209ENST00000612485 RAB40CQ96S21 281 aa12.65□□□□□ -0.38
PRKN-209ENST00000612485 SDHCQ99643 169 aaPredicted RBP12.65□□□□□ -0.38
PRKN-209ENST00000612485 FBXL17Q9UF56 701 aa12.65□□□□□ -0.38
PRKN-209ENST00000612485 FAM90A26D6RGX4 464 aa12.64□□□□□ -0.39
PRKN-209ENST00000612485 DEFB4AO15263 64 aa12.64□□□□□ -0.39
PRKN-209ENST00000612485 MED6O75586 246 aa12.64□□□□□ -0.39
PRKN-209ENST00000612485 SFT2D2O95562 160 aa12.64□□□□□ -0.39
PRKN-209ENST00000612485 GIG44P09565 113 aaPredicted RBP12.64□□□□□ -0.39
PRKN-209ENST00000612485 PBDC1Q9BVG4 233 aa12.64□□□□□ -0.39
PRKN-209ENST00000612485 TMED3Q9Y3Q3 217 aa12.64□□□□□ -0.39
PRKN-209ENST00000612485 KMT2AQ03164 3969 aa12.63□□□□□ -0.39
PRKN-209ENST00000612485 IAPPP10997 89 aa12.63□□□□□ -0.39
PRKN-209ENST00000612485 MIFP14174 115 aa12.63□□□□□ -0.39
PRKN-209ENST00000612485 C4BPBP20851 252 aa12.63□□□□□ -0.39
PRKN-209ENST00000612485 INPP1P49441 399 aa12.63□□□□□ -0.39
PRKN-209ENST00000612485 RPP30P78346 268 aaKnown RBP12.63□□□□□ -0.39
PRKN-209ENST00000612485 TRIQKQ629K1 86 aa12.63□□□□□ -0.39
PRKN-209ENST00000612485 Q8NAQ8 132 aa12.63□□□□□ -0.39
PRKN-209ENST00000612485 CIB3Q96Q77 187 aaPredicted RBP12.63□□□□□ -0.39
PRKN-209ENST00000612485 AGRNO00468 2067 aa12.62□□□□□ -0.39
PRKN-209ENST00000612485 IGKV1D-37A0A075B6S9 117 aa12.62□□□□□ -0.39
PRKN-209ENST00000612485 LINC00854A0A1B0GVQ3 168 aa12.62□□□□□ -0.39
PRKN-209ENST00000612485 ZNF705EA8MWA4 302 aaPredicted RBP12.62□□□□□ -0.39
PRKN-209ENST00000612485 NUTF2P61970 127 aaKnown RBP12.62□□□□□ -0.39
PRKN-209ENST00000612485 ZNF90Q03938 601 aa12.62□□□□□ -0.39
PRKN-209ENST00000612485 PPP1R1AQ13522 171 aa12.62□□□□□ -0.39
PRKN-209ENST00000612485 CENPSQ8N2Z9 138 aa12.62□□□□□ -0.39
PRKN-209ENST00000612485 PAIP2BQ9ULR5 123 aaKnown RBP12.62□□□□□ -0.39
PRKN-209ENST00000612485 IGHV4-28A0A0C4DH34 117 aa12.61□□□□□ -0.39
PRKN-209ENST00000612485 SNRPGP15A8MWD9 76 aa12.61□□□□□ -0.39
PRKN-209ENST00000612485 UBE2MP61081 183 aaKnown RBP12.61□□□□□ -0.39
PRKN-209ENST00000612485 C2CD4CQ8TF44 421 aa12.61□□□□□ -0.39
PRKN-209ENST00000612485 C1QTNF4Q9BXJ3 329 aa12.61□□□□□ -0.39
PRKN-209ENST00000612485 HRH4Q9H3N8 390 aa12.61□□□□□ -0.39
PRKN-209ENST00000612485 TBC1D24Q9ULP9 559 aa12.61□□□□□ -0.39
PRKN-209ENST00000612485 SYNGR2O43760 224 aa12.6□□□□□ -0.39
PRKN-209ENST00000612485 HOXB5P09067 269 aa12.6□□□□□ -0.39
PRKN-209ENST00000612485 IL7P13232 177 aa12.6□□□□□ -0.39
PRKN-209ENST00000612485 LYZP61626 148 aa12.6□□□□□ -0.39
PRKN-209ENST00000612485 C1orf194Q5T5A4 169 aa12.6□□□□□ -0.39
PRKN-209ENST00000612485 LGALS9CQ6DKI2 356 aa12.6□□□□□ -0.39
PRKN-209ENST00000612485 TRGV9Q99603 122 aa12.6□□□□□ -0.39
PRKN-209ENST00000612485 BATF3Q9NR55 127 aa12.6□□□□□ -0.39
PRKN-209ENST00000612485 CLEC5AQ9NY25 188 aa12.6□□□□□ -0.39
PRKN-209ENST00000612485 NAP1L6A6NFF2 107 aa12.59□□□□□ -0.39
PRKN-209ENST00000612485 C11orf94C9JXX5 98 aa12.59□□□□□ -0.39
PRKN-209ENST00000612485 H3BMM0 161 aa12.59□□□□□ -0.39
PRKN-209ENST00000612485 CFDP00746 253 aaPredicted RBP12.59□□□□□ -0.39
PRKN-209ENST00000612485 RBMY1A1P0DJD3 496 aaKnown RBP12.59□□□□□ -0.39
PRKN-209ENST00000612485 RBMY1CP0DJD4 496 aa12.59□□□□□ -0.39
PRKN-209ENST00000612485 ID1P41134 155 aa12.59□□□□□ -0.39
PRKN-209ENST00000612485 NKX2-1P43699 371 aaPredicted RBP12.59□□□□□ -0.39
PRKN-209ENST00000612485 TCTAP57738 103 aa12.59□□□□□ -0.39
PRKN-209ENST00000612485 RBMY1FQ15415 496 aaKnown RBP12.59□□□□□ -0.39
PRKN-209ENST00000612485 THAP8Q8NA92 274 aa12.59□□□□□ -0.39
PRKN-209ENST00000612485 CSNK1G2-AS1Q8NCQ2 148 aa12.59□□□□□ -0.39
PRKN-209ENST00000612485 PPP1R14BQ96C90 147 aa12.59□□□□□ -0.39
PRKN-209ENST00000612485 MAGT1Q9H0U3 335 aa12.59□□□□□ -0.39
PRKN-209ENST00000612485 X6R8D5 127 aa12.59□□□□□ -0.39
PRKN-209ENST00000612485 WRBO00258 174 aa12.58□□□□□ -0.4
PRKN-209ENST00000612485 HLA-DRB4P13762 266 aa12.58□□□□□ -0.4
PRKN-209ENST00000612485 OR2F1Q13607 317 aa12.58□□□□□ -0.4
PRKN-209ENST00000612485 GGNBP1Q5YKI7 109 aa12.58□□□□□ -0.4
PRKN-209ENST00000612485 HLA-DRB4X5D2U9 266 aa12.58□□□□□ -0.4
PRKN-209ENST00000612485 LINC00299Q6ZSB3 139 aa12.57□□□□□ -0.4
PRKN-209ENST00000612485 LINC00052Q96N35 136 aa12.57□□□□□ -0.4
PRKN-209ENST00000612485 PTTG2Q9NZH5 202 aa12.57□□□□□ -0.4
PRKN-209ENST00000612485 IGKV1OR2-108A0A075B7D4 117 aa12.56□□□□□ -0.4
PRKN-209ENST00000612485 C9orf170A2RU37 121 aa12.56□□□□□ -0.4
PRKN-209ENST00000612485 CENPXA8MT69 81 aa12.56□□□□□ -0.4
PRKN-209ENST00000612485 NDUFB6O95139 128 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms