RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 NPY1RP25929 384 aa12.85□□□□□ -0.35
SSBP1-215ENST00000612337 SNRPD3P62318 126 aaKnown RBP12.85□□□□□ -0.35
SSBP1-215ENST00000612337 NMSQ5H8A3 153 aa12.85□□□□□ -0.35
SSBP1-215ENST00000612337 Q6ZTC4 211 aa12.85□□□□□ -0.35
SSBP1-215ENST00000612337 CENPSQ8N2Z9 138 aa12.85□□□□□ -0.35
SSBP1-215ENST00000612337 NPIPB3Q92617 1050 aa12.85□□□□□ -0.35
SSBP1-215ENST00000612337 IL22RA2Q969J5 263 aa12.85□□□□□ -0.35
SSBP1-215ENST00000612337 KIAA1109Q2LD37 5005 aa12.84□□□□□ -0.35
SSBP1-215ENST00000612337 PKHD1P08F94 4074 aa12.84□□□□□ -0.35
SSBP1-215ENST00000612337 FABP12A6NFH5 140 aa12.84□□□□□ -0.35
SSBP1-215ENST00000612337 FAM90A26D6RGX4 464 aa12.84□□□□□ -0.35
SSBP1-215ENST00000612337 BUB3O43684 328 aa12.84□□□□□ -0.35
SSBP1-215ENST00000612337 NXPH3O95157 252 aa12.84□□□□□ -0.35
SSBP1-215ENST00000612337 RD3LP0DJH9 198 aa12.84□□□□□ -0.35
SSBP1-215ENST00000612337 SULT1A3P0DMM9 295 aa12.84□□□□□ -0.35
SSBP1-215ENST00000612337 SULT1A4P0DMN0 295 aa12.84□□□□□ -0.35
SSBP1-215ENST00000612337 OR51S1Q8NGJ8 323 aa12.84□□□□□ -0.35
SSBP1-215ENST00000612337 ACY3Q96HD9 319 aa12.84□□□□□ -0.35
SSBP1-215ENST00000612337 NRN1Q9NPD7 142 aa12.84□□□□□ -0.35
SSBP1-215ENST00000612337 KCNIP3Q9Y2W7 256 aa12.84□□□□□ -0.35
SSBP1-215ENST00000612337 NUTF2P61970 127 aaKnown RBP12.83□□□□□ -0.36
SSBP1-215ENST00000612337 SIGLEC15Q6ZMC9 328 aa12.83□□□□□ -0.36
SSBP1-215ENST00000612337 C1QTNF4Q9BXJ3 329 aa12.83□□□□□ -0.36
SSBP1-215ENST00000612337 U3KQ87 197 aa12.83□□□□□ -0.36
SSBP1-215ENST00000612337 IGHV4-4A0A075B6R2 117 aa12.82□□□□□ -0.36
SSBP1-215ENST00000612337 PSG1P11464 419 aa12.82□□□□□ -0.36
SSBP1-215ENST00000612337 SCP2D1Q9UJQ7 156 aa12.82□□□□□ -0.36
SSBP1-215ENST00000612337 H3BMM0 161 aa12.81□□□□□ -0.36
SSBP1-215ENST00000612337 IFNA10P01566 189 aa12.81□□□□□ -0.36
SSBP1-215ENST00000612337 CCR6P51684 374 aa12.81□□□□□ -0.36
SSBP1-215ENST00000612337 LGI3Q8N145 548 aa12.81□□□□□ -0.36
SSBP1-215ENST00000612337 SCGB3A2Q96PL1 93 aa12.81□□□□□ -0.36
SSBP1-215ENST00000612337 RNF126Q9BV68 326 aa12.81□□□□□ -0.36
SSBP1-215ENST00000612337 PRR13Q9NZ81 148 aa12.81□□□□□ -0.36
SSBP1-215ENST00000612337 HSPB7Q9UBY9 170 aa12.81□□□□□ -0.36
SSBP1-215ENST00000612337 CELA1Q9UNI1 258 aa12.81□□□□□ -0.36
SSBP1-215ENST00000612337 DYNC1H1Q14204 4646 aaKnown RBP12.8□□□□□ -0.36
SSBP1-215ENST00000612337 A0A0B4J2A0 478 aa12.8□□□□□ -0.36
SSBP1-215ENST00000612337 CCDC160A6NGH7 325 aa12.8□□□□□ -0.36
SSBP1-215ENST00000612337 HLA-DRB4P13762 266 aa12.8□□□□□ -0.36
SSBP1-215ENST00000612337 NUP62P37198 522 aaPredicted RBP12.8□□□□□ -0.36
SSBP1-215ENST00000612337 NKX2-1P43699 371 aaPredicted RBP12.8□□□□□ -0.36
SSBP1-215ENST00000612337 SMCO1Q147U7 214 aa12.8□□□□□ -0.36
SSBP1-215ENST00000612337 C12orf74Q32Q52 190 aa12.8□□□□□ -0.36
SSBP1-215ENST00000612337 OR51G1Q8NGK1 321 aa12.8□□□□□ -0.36
SSBP1-215ENST00000612337 DTD1Q8TEA8 209 aa12.8□□□□□ -0.36
SSBP1-215ENST00000612337 RNF125Q96EQ8 232 aa12.8□□□□□ -0.36
SSBP1-215ENST00000612337 XCL2Q9UBD3 114 aa12.8□□□□□ -0.36
SSBP1-215ENST00000612337 SHPKQ9UHJ6 478 aa12.8□□□□□ -0.36
SSBP1-215ENST00000612337 HLA-DRB4X5D2U9 266 aa12.8□□□□□ -0.36
SSBP1-215ENST00000612337 ATP5IP56385 69 aaPredicted RBP12.79□□□□□ -0.36
SSBP1-215ENST00000612337 KLF9Q13886 244 aaPredicted RBP12.79□□□□□ -0.36
SSBP1-215ENST00000612337 OR8G2PQ6IF36 304 aa12.79□□□□□ -0.36
SSBP1-215ENST00000612337 LYZL2Q7Z4W2 148 aa12.79□□□□□ -0.36
SSBP1-215ENST00000612337 KRTAP17-1Q9BYP8 105 aa12.79□□□□□ -0.36
SSBP1-215ENST00000612337 RBM38Q9H0Z9 239 aaKnown RBP12.79□□□□□ -0.36
SSBP1-215ENST00000612337 RBKSQ9H477 322 aa12.79□□□□□ -0.36
SSBP1-215ENST00000612337 MCUBQ9NWR8 336 aa12.79□□□□□ -0.36
SSBP1-215ENST00000612337 PFDN2Q9UHV9 154 aa12.79□□□□□ -0.36
SSBP1-215ENST00000612337 DNAH11Q96DT5 4516 aa12.78□□□□□ -0.36
SSBP1-215ENST00000612337 DEFB131BA0A096LNP1 70 aa12.78□□□□□ -0.36
SSBP1-215ENST00000612337 AMBPP02760 352 aa12.78□□□□□ -0.36
SSBP1-215ENST00000612337 GPX4P36969 197 aaPredicted RBP12.78□□□□□ -0.36
SSBP1-215ENST00000612337 SUPT4H1P63272 117 aaKnown RBP12.78□□□□□ -0.36
SSBP1-215ENST00000612337 PYDC2Q56P42 97 aa12.78□□□□□ -0.36
SSBP1-215ENST00000612337 PBDC1Q9BVG4 233 aa12.78□□□□□ -0.36
SSBP1-215ENST00000612337 ZFP92A6NM28 416 aa12.77□□□□□ -0.37
SSBP1-215ENST00000612337 AKR1C4P17516 323 aa12.77□□□□□ -0.37
SSBP1-215ENST00000612337 SRPXP78539 464 aa12.77□□□□□ -0.37
SSBP1-215ENST00000612337 GAMTQ14353 236 aa12.77□□□□□ -0.37
SSBP1-215ENST00000612337 ZNF705AQ6ZN79 300 aaPredicted RBP12.77□□□□□ -0.37
SSBP1-215ENST00000612337 ZNF767PQ75MW2 155 aa12.77□□□□□ -0.37
SSBP1-215ENST00000612337 TRIM63Q969Q1 353 aa12.77□□□□□ -0.37
SSBP1-215ENST00000612337 NEU1Q99519 415 aa12.77□□□□□ -0.37
SSBP1-215ENST00000612337 V9GYH0 126 aa12.77□□□□□ -0.37
SSBP1-215ENST00000612337 PCLOQ9Y6V0 5065 aa12.77□□□□□ -0.37
SSBP1-215ENST00000612337 PKD1P98161 4303 aa12.76□□□□□ -0.37
SSBP1-215ENST00000612337 IGKV1D-37A0A075B6S9 117 aa12.76□□□□□ -0.37
SSBP1-215ENST00000612337 ZNF701M0R085 212 aaPredicted RBP12.76□□□□□ -0.37
SSBP1-215ENST00000612337 ANXA3P12429 323 aa12.76□□□□□ -0.37
SSBP1-215ENST00000612337 S100A5P33763 92 aa12.76□□□□□ -0.37
SSBP1-215ENST00000612337 ZNF90Q03938 601 aa12.76□□□□□ -0.37
SSBP1-215ENST00000612337 GDF5OSQ5U4N7 250 aa12.76□□□□□ -0.37
SSBP1-215ENST00000612337 SLC35E1Q96K37 410 aa12.76□□□□□ -0.37
SSBP1-215ENST00000612337 WDR12Q9GZL7 423 aaKnown RBP12.76□□□□□ -0.37
SSBP1-215ENST00000612337 PIGBOS1A0A0B4J2F0 54 aa12.75□□□□□ -0.37
SSBP1-215ENST00000612337 FAUP35544 74 aaKnown RBP12.75□□□□□ -0.37
SSBP1-215ENST00000612337 ID1P41134 155 aa12.75□□□□□ -0.37
SSBP1-215ENST00000612337 AP3S2P59780 193 aa12.75□□□□□ -0.37
SSBP1-215ENST00000612337 ZNF79Q15937 498 aa12.75□□□□□ -0.37
SSBP1-215ENST00000612337 C1orf194Q5T5A4 169 aa12.75□□□□□ -0.37
SSBP1-215ENST00000612337 FOXI2Q6ZQN5 318 aa12.75□□□□□ -0.37
SSBP1-215ENST00000612337 CCDC190Q86UF4 302 aa12.75□□□□□ -0.37
SSBP1-215ENST00000612337 OR1S1Q8NH92 325 aa12.75□□□□□ -0.37
SSBP1-215ENST00000612337 LINC00052Q96N35 136 aa12.75□□□□□ -0.37
SSBP1-215ENST00000612337 SAV1Q9H4B6 383 aaPredicted RBP12.75□□□□□ -0.37
SSBP1-215ENST00000612337 ZNF705FA8MVS1 300 aaPredicted RBP12.74□□□□□ -0.37
SSBP1-215ENST00000612337 FABP1P07148 127 aa12.74□□□□□ -0.37
SSBP1-215ENST00000612337 ZNF705DP0CH99 300 aaPredicted RBP12.74□□□□□ -0.37
SSBP1-215ENST00000612337 ZNF705BP0CI00 300 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms