RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 TCF21O43680 179 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 HLA-DQA1P01909 254 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 TMEM108Q6UXF1 575 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 ZNF841Q6ZN19 808 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 PDPNQ86YL7 162 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 BET1LQ9NYM9 111 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 PPIAL4EA0A075B759 164 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 CGB1A6NKQ9 187 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 PPIAL4DF5H284 164 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 PPIAL4FP0DN26 164 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 ADIPOQQ15848 244 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 LINC00322Q6ZN03 302 aaPredicted RBP11.33□□□□□ -0.6
COL6A1-207ENST00000612273 C1orf174Q8IYL3 243 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 STPG4Q8N801 248 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 OR4C13Q8NGP0 309 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 C20orf144Q9BQM9 153 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 LINC00312Q9Y6C7 94 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 NDUFB3O43676 98 aa11.32□□□□□ -0.6
COL6A1-207ENST00000612273 LYZP61626 148 aa11.32□□□□□ -0.6
COL6A1-207ENST00000612273 TBR1Q16650 682 aa11.32□□□□□ -0.6
COL6A1-207ENST00000612273 ZNF329Q86UD4 541 aa11.32□□□□□ -0.6
COL6A1-207ENST00000612273 Q8N976 141 aa11.32□□□□□ -0.6
COL6A1-207ENST00000612273 IZUMO1RA6ND01 250 aa11.32□□□□□ -0.6
COL6A1-207ENST00000612273 DLEU1O43261 78 aa11.32□□□□□ -0.6
COL6A1-207ENST00000612273 MT-ND6P03923 174 aa11.32□□□□□ -0.6
COL6A1-207ENST00000612273 TNFRSF1AP19438 455 aa11.32□□□□□ -0.6
COL6A1-207ENST00000612273 IGFL2Q6UWQ7 119 aa11.32□□□□□ -0.6
COL6A1-207ENST00000612273 OSR1Q8TAX0 266 aaPredicted RBP11.32□□□□□ -0.6
COL6A1-207ENST00000612273 OR8B2Q96RD0 313 aa11.32□□□□□ -0.6
COL6A1-207ENST00000612273 C17orf100A8MU93 164 aa11.31□□□□□ -0.6
COL6A1-207ENST00000612273 C22orf46C9J442 243 aa11.31□□□□□ -0.6
COL6A1-207ENST00000612273 HYPMO75409 117 aa11.31□□□□□ -0.6
COL6A1-207ENST00000612273 CTSZQ9UBR2 303 aa11.31□□□□□ -0.6
COL6A1-207ENST00000612273 SMIM27A0A1W2PRY6 76 aa11.31□□□□□ -0.6
COL6A1-207ENST00000612273 PLGLAQ15195 96 aa11.31□□□□□ -0.6
COL6A1-207ENST00000612273 POU2AF1Q16633 256 aa11.31□□□□□ -0.6
COL6A1-207ENST00000612273 LINC00173Q6ZV60 143 aa11.31□□□□□ -0.6
COL6A1-207ENST00000612273 FAM222BQ8WU58 562 aa11.31□□□□□ -0.6
COL6A1-207ENST00000612273 CUL9Q8IWT3 2517 aa11.31□□□□□ -0.6
COL6A1-207ENST00000612273 MUC21A0A0G2JKD1 596 aa11.31□□□□□ -0.6
COL6A1-207ENST00000612273 MUC21A0A140T8X8 626 aa11.31□□□□□ -0.6
COL6A1-207ENST00000612273 BPIFB3P59826 476 aa11.31□□□□□ -0.6
COL6A1-207ENST00000612273 MUC21Q5SSG8 566 aa11.31□□□□□ -0.6
COL6A1-207ENST00000612273 OR4B1Q8NGF8 309 aa11.31□□□□□ -0.6
COL6A1-207ENST00000612273 IGKV1D-37A0A075B6S9 117 aa11.3□□□□□ -0.6
COL6A1-207ENST00000612273 SIAH2O43255 324 aa11.3□□□□□ -0.6
COL6A1-207ENST00000612273 RBP4P02753 201 aa11.3□□□□□ -0.6
COL6A1-207ENST00000612273 NBEAP1P0C6P0 100 aa11.3□□□□□ -0.6
COL6A1-207ENST00000612273 GATA4P43694 442 aa11.3□□□□□ -0.6
COL6A1-207ENST00000612273 UNQ5815/PRO19632Q6UWF5 114 aa11.3□□□□□ -0.6
COL6A1-207ENST00000612273 EXOC3-AS1Q8N2X6 119 aa11.3□□□□□ -0.6
COL6A1-207ENST00000612273 FXYD5Q96DB9 178 aa11.3□□□□□ -0.6
COL6A1-207ENST00000612273 LY96Q9Y6Y9 160 aa11.3□□□□□ -0.6
COL6A1-207ENST00000612273 TRBV9A0A0B4J1U6 114 aa11.3□□□□□ -0.6
COL6A1-207ENST00000612273 TCRBV4S1A1TA0A5B7 111 aa11.3□□□□□ -0.6
COL6A1-207ENST00000612273 C16orf97H3BN30 126 aa11.3□□□□□ -0.6
COL6A1-207ENST00000612273 TMEM177Q53S58 311 aa11.3□□□□□ -0.6
COL6A1-207ENST00000612273 EBLN2Q6P2I7 272 aa11.3□□□□□ -0.6
COL6A1-207ENST00000612273 ZNF833PQ6ZTB9 187 aa11.3□□□□□ -0.6
COL6A1-207ENST00000612273 TRAV9-1A0A075B6T8 112 aa11.29□□□□□ -0.6
COL6A1-207ENST00000612273 A0A1B0GWJ7 208 aa11.29□□□□□ -0.6
COL6A1-207ENST00000612273 LY6HO94772 140 aa11.29□□□□□ -0.6
COL6A1-207ENST00000612273 LRRC10Q5BKY1 277 aa11.29□□□□□ -0.6
COL6A1-207ENST00000612273 CIARTQ8N365 385 aaPredicted RBP11.29□□□□□ -0.6
COL6A1-207ENST00000612273 SELENOKQ9Y6D0 94 aa11.29□□□□□ -0.6
COL6A1-207ENST00000612273 PTPRQQ9UMZ3 2332 aa11.29□□□□□ -0.6
COL6A1-207ENST00000612273 A0A0G2JNJ9 132 aa11.29□□□□□ -0.6
COL6A1-207ENST00000612273 SUB1P53999 127 aaKnown RBP eCLIP11.29□□□□□ -0.6
COL6A1-207ENST00000612273 PRRX1P54821 245 aa11.29□□□□□ -0.6
COL6A1-207ENST00000612273 OR5AN1Q8NGI8 311 aa11.29□□□□□ -0.6
COL6A1-207ENST00000612273 FBXL15Q9H469 300 aa11.29□□□□□ -0.6
COL6A1-207ENST00000612273 Q9UFV3 132 aa11.29□□□□□ -0.6
COL6A1-207ENST00000612273 PSMB11A5LHX3 300 aa11.29□□□□□ -0.6
COL6A1-207ENST00000612273 OR10J3Q5JRS4 329 aa11.29□□□□□ -0.6
COL6A1-207ENST00000612273 PRNTQ86SH4 94 aa11.29□□□□□ -0.6
COL6A1-207ENST00000612273 DAZAP1Q96EP5 407 aaKnown RBP11.29□□□□□ -0.6
COL6A1-207ENST00000612273 EPDR1Q9UM22 224 aa11.29□□□□□ -0.6
COL6A1-207ENST00000612273 WASHC3Q9Y3C0 194 aa11.29□□□□□ -0.6
COL6A1-207ENST00000612273 ARL2-SNX15V9GYD0 113 aa11.29□□□□□ -0.6
COL6A1-207ENST00000612273 ITGB1BP1O14713 200 aa11.28□□□□□ -0.6
COL6A1-207ENST00000612273 TM4SF5O14894 197 aa11.28□□□□□ -0.6
COL6A1-207ENST00000612273 IGLC2P0DOY2 106 aa11.28□□□□□ -0.6
COL6A1-207ENST00000612273 IGLC3P0DOY3 106 aa11.28□□□□□ -0.6
COL6A1-207ENST00000612273 VMA21Q3ZAQ7 101 aa11.28□□□□□ -0.6
COL6A1-207ENST00000612273 PRR30Q53SZ7 412 aaPredicted RBP11.28□□□□□ -0.6
COL6A1-207ENST00000612273 OR1L4Q8NGR5 311 aa11.28□□□□□ -0.6
COL6A1-207ENST00000612273 CACNG8Q8WXS5 425 aa11.28□□□□□ -0.6
COL6A1-207ENST00000612273 ESDP10768 282 aa11.28□□□□□ -0.6
COL6A1-207ENST00000612273 LAMTOR2Q9Y2Q5 125 aa11.28□□□□□ -0.6
COL6A1-207ENST00000612273 TMSB15BA0A087X1C1 80 aa11.27□□□□□ -0.6
COL6A1-207ENST00000612273 M0QZK8 103 aa11.27□□□□□ -0.6
COL6A1-207ENST00000612273 KLF17Q5JT82 389 aaPredicted RBP11.27□□□□□ -0.6
COL6A1-207ENST00000612273 COL5A1-AS1Q5SY13 56 aa11.27□□□□□ -0.6
COL6A1-207ENST00000612273 GOLT1AQ6ZVE7 132 aa11.27□□□□□ -0.6
COL6A1-207ENST00000612273 IGHV3OR16-8A0A075B7F1 116 aa11.27□□□□□ -0.61
COL6A1-207ENST00000612273 SNAI2O43623 268 aa11.27□□□□□ -0.61
COL6A1-207ENST00000612273 P01737 135 aa11.27□□□□□ -0.61
COL6A1-207ENST00000612273 SPATA12Q7Z6I5 190 aa11.27□□□□□ -0.61
COL6A1-207ENST00000612273 PRSS33Q8NF86 280 aa11.27□□□□□ -0.61
COL6A1-207ENST00000612273 MRPL32Q9BYC8 188 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms