RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 C9orf106Q8NAJ2 232 aa8.76□□□□□ -1.01
PCDHGC3-202ENST00000611950 FDCSPQ8NFU4 85 aa8.76□□□□□ -1.01
PCDHGC3-202ENST00000611950 OR2T10Q8NGZ9 312 aa8.76□□□□□ -1.01
PCDHGC3-202ENST00000611950 SCO2A0A1W2PP80 73 aa8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 CLDN14O95500 239 aa8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 ZNF134P52741 427 aa8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 YPEL3P61236 119 aaPredicted RBP8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 POU2AF1Q16633 256 aa8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 TIMM23BQ5SRD1 257 aa8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 WDR31Q8NA23 367 aa8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 TMEM116Q8NCL8 245 aa8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 CMTM2Q8TAZ6 248 aa8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 TRBV20OR9-2A0A075B6H5 130 aa8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 PSMB11A5LHX3 300 aa8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 CGAP01215 116 aa8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 IGHG3P01860 377 aa8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 ADH4P08319 380 aa8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 FRMD6-AS1P0C7T7 363 aa8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 IL3RAP26951 378 aa8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 KIR2DL2P43627 348 aaPredicted RBP8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 RPL8P62917 257 aaKnown RBP8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 MSMPQ1L6U9 139 aa8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 MPV17L2Q567V2 206 aa8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 BVES-AS1Q5T3Y7 98 aa8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 C1orf229Q6ZS94 237 aaPredicted RBP8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 MOB3BQ86TA1 216 aa8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 OR4A16Q8NH70 328 aa8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 CREBBPQ92793 2442 aa8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 RAB9BQ9NP90 201 aa8.75□□□□□ -1.01
PCDHGC3-202ENST00000611950 MYO9AB2RTY4 2548 aa8.74□□□□□ -1.01
PCDHGC3-202ENST00000611950 TANC2Q9HCD6 1990 aa8.74□□□□□ -1.01
PCDHGC3-202ENST00000611950 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.74□□□□□ -1.01
PCDHGC3-202ENST00000611950 DIRC3C9JPN6 131 aa8.74□□□□□ -1.01
PCDHGC3-202ENST00000611950 SPRY3O43610 288 aa8.74□□□□□ -1.01
PCDHGC3-202ENST00000611950 AGMATQ9BSE5 352 aa8.74□□□□□ -1.01
PCDHGC3-202ENST00000611950 FAM90A26D6RGX4 464 aa8.74□□□□□ -1.01
PCDHGC3-202ENST00000611950 J3QR89 54 aa8.74□□□□□ -1.01
PCDHGC3-202ENST00000611950 K7EP34 96 aa8.74□□□□□ -1.01
PCDHGC3-202ENST00000611950 SPINT2O43291 252 aa8.74□□□□□ -1.01
PCDHGC3-202ENST00000611950 IGKV3-15P01624 115 aa8.74□□□□□ -1.01
PCDHGC3-202ENST00000611950 P0C879 139 aa8.74□□□□□ -1.01
PCDHGC3-202ENST00000611950 GATA2P23769 480 aaPredicted RBP8.74□□□□□ -1.01
PCDHGC3-202ENST00000611950 PRDX2P32119 198 aa8.74□□□□□ -1.01
PCDHGC3-202ENST00000611950 SLC35B1P78383 322 aa8.74□□□□□ -1.01
PCDHGC3-202ENST00000611950 EIF4EBP1Q13541 118 aaPredicted RBP8.74□□□□□ -1.01
PCDHGC3-202ENST00000611950 SIGLEC15Q6ZMC9 328 aa8.74□□□□□ -1.01
PCDHGC3-202ENST00000611950 SGMS2Q8NHU3 365 aa8.74□□□□□ -1.01
PCDHGC3-202ENST00000611950 PIGBOS1A0A0B4J2F0 54 aa8.73□□□□□ -1.01
PCDHGC3-202ENST00000611950 FABP5P3A8MUU1 101 aa8.73□□□□□ -1.01
PCDHGC3-202ENST00000611950 TMEM250H0YL14 139 aa8.73□□□□□ -1.01
PCDHGC3-202ENST00000611950 SLC35E4Q6ICL7 350 aa8.73□□□□□ -1.01
PCDHGC3-202ENST00000611950 Q8N7P7 452 aa8.73□□□□□ -1.01
PCDHGC3-202ENST00000611950 SNRNP40Q96DI7 357 aaKnown RBP8.73□□□□□ -1.01
PCDHGC3-202ENST00000611950 SRSF8Q9BRL6 282 aaKnown RBP8.73□□□□□ -1.01
PCDHGC3-202ENST00000611950 FAM231BA6NCW3 169 aa8.73□□□□□ -1.01
PCDHGC3-202ENST00000611950 USF1P22415 310 aaPredicted RBP8.73□□□□□ -1.01
PCDHGC3-202ENST00000611950 DUTP33316 252 aaKnown RBP8.73□□□□□ -1.01
PCDHGC3-202ENST00000611950 MEF2CQ06413 473 aaPredicted RBP8.73□□□□□ -1.01
PCDHGC3-202ENST00000611950 TREML4Q6UXN2 200 aa8.73□□□□□ -1.01
PCDHGC3-202ENST00000611950 C8orf86Q6ZUL3 223 aa8.73□□□□□ -1.01
PCDHGC3-202ENST00000611950 OR5AU1Q8NGC0 362 aa8.73□□□□□ -1.01
PCDHGC3-202ENST00000611950 OR9G4Q8NGQ1 327 aa8.73□□□□□ -1.01
PCDHGC3-202ENST00000611950 MRAPQ8TCY5 172 aa8.73□□□□□ -1.01
PCDHGC3-202ENST00000611950 GRAMD2BQ96HH9 432 aa8.73□□□□□ -1.01
PCDHGC3-202ENST00000611950 CXXC4Q9H2H0 198 aa8.73□□□□□ -1.01
PCDHGC3-202ENST00000611950 FNDC4Q9H6D8 234 aaPredicted RBP8.73□□□□□ -1.01
PCDHGC3-202ENST00000611950 ZNF71Q9NQZ8 489 aaPredicted RBP8.73□□□□□ -1.01
PCDHGC3-202ENST00000611950 PXMP4Q9Y6I8 212 aa8.73□□□□□ -1.01
PCDHGC3-202ENST00000611950 ZGRF1Q86YA3 2104 aa8.73□□□□□ -1.01
PCDHGC3-202ENST00000611950 IGKV1D-17A0A075B6S4 117 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 C17orf112F2Z3M2 114 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 IGFBP2P18065 325 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 CBLN1P23435 193 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 RPRMLQ8N4K4 120 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 MGST2Q99735 147 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 MANBALQ9NQG1 85 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 WASHC3Q9Y3C0 194 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 TIMM9Q9Y5J7 89 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 TRAPPC1Q9Y5R8 145 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 CENPEQ02224 2701 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 MUC21A0A0G2JKD1 596 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 A0A0G2JLM5 398 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 MUC21A0A140T8X8 626 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 GAGE12JA6NER3 117 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 GAGE7O76087 117 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 IGHV3-48P01763 117 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 GAGE12FP0CL80 117 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 GAGE12GP0CL81 117 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 GAGE12IP0CL82 117 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 NPY1RP25929 384 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 GLRXP35754 106 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 UQCRFS1P47985 274 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 GAGE4Q13068 117 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 MUC21Q5SSG8 566 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 FAM162BQ5T6X4 162 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 TMEM78Q5T7P6 136 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 ZNF474Q6S9Z5 364 aaPredicted RBP8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 MBD6Q96DN6 1003 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 NAT8BQ9UHF3 227 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 M0R1B8 84 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms