RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 OR8A1Q8NGG7 326 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 LPAR2Q9HBW0 351 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 COL4A2P08572 1712 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 IGHV2-26A0A0B4J1V2 119 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 TMEM189A5PLL7 270 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 BTF3P20290 206 aaKnown RBP7.05□□□□□ -1.28
LIG4-204ENST00000611712 YPEL3P61236 119 aaPredicted RBP7.05□□□□□ -1.28
LIG4-204ENST00000611712 OR10J3Q5JRS4 329 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 SEM1Q6ZVN7 128 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 BEND2Q8NDZ0 799 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 FMC1Q96HJ9 113 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 YPEL4Q96NS1 127 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 TRBV20OR9-2A0A075B6H5 130 aa7.04□□□□□ -1.28
LIG4-204ENST00000611712 A0A1W2PPI3 338 aa7.04□□□□□ -1.28
LIG4-204ENST00000611712 LHBP01229 141 aa7.04□□□□□ -1.28
LIG4-204ENST00000611712 POU2AF1Q16633 256 aa7.04□□□□□ -1.28
LIG4-204ENST00000611712 OR5AN1Q8NGI8 311 aa7.04□□□□□ -1.28
LIG4-204ENST00000611712 TSKUQ8WUA8 353 aa7.04□□□□□ -1.28
LIG4-204ENST00000611712 UBTD1Q9HAC8 227 aa7.04□□□□□ -1.28
LIG4-204ENST00000611712 DLX1P56177 255 aa7.04□□□□□ -1.28
LIG4-204ENST00000611712 WT1-ASQ06250 92 aa7.04□□□□□ -1.28
LIG4-204ENST00000611712 DIAPH2-AS1Q14236 149 aa7.04□□□□□ -1.28
LIG4-204ENST00000611712 C3orf36Q3SXR2 165 aa7.04□□□□□ -1.28
LIG4-204ENST00000611712 OR4C5Q8NGB2 326 aa7.04□□□□□ -1.28
LIG4-204ENST00000611712 C11orf52Q96A22 123 aa7.04□□□□□ -1.28
LIG4-204ENST00000611712 K7EM74 188 aa7.04□□□□□ -1.28
LIG4-204ENST00000611712 K7EN84 100 aa7.04□□□□□ -1.28
LIG4-204ENST00000611712 TIMM23O14925 209 aa7.04□□□□□ -1.28
LIG4-204ENST00000611712 COA6Q5JTJ3 125 aaKnown RBP7.04□□□□□ -1.28
LIG4-204ENST00000611712 RBPMS2Q6ZRY4 209 aaKnown RBP7.04□□□□□ -1.28
LIG4-204ENST00000611712 ZNF833PQ6ZTB9 187 aa7.04□□□□□ -1.28
LIG4-204ENST00000611712 DDB2Q92466 427 aa7.04□□□□□ -1.28
LIG4-204ENST00000611712 TMEM70Q9BUB7 260 aa7.04□□□□□ -1.28
LIG4-204ENST00000611712 V9GYV3 84 aa7.04□□□□□ -1.28
LIG4-204ENST00000611712 ANKHD1Q8IWZ3 2542 aaKnown RBP7.03□□□□□ -1.28
LIG4-204ENST00000611712 ARFGEF3Q5TH69 2177 aa7.03□□□□□ -1.28
LIG4-204ENST00000611712 TRAV30A0A087WSZ9 112 aa7.03□□□□□ -1.28
LIG4-204ENST00000611712 TCF21O43680 179 aa7.03□□□□□ -1.28
LIG4-204ENST00000611712 IGHV3-23P01764 117 aa7.03□□□□□ -1.28
LIG4-204ENST00000611712 PSG1P11464 419 aa7.03□□□□□ -1.28
LIG4-204ENST00000611712 RNF151Q2KHN1 245 aa7.03□□□□□ -1.28
LIG4-204ENST00000611712 TEX36Q5VZQ5 186 aa7.03□□□□□ -1.28
LIG4-204ENST00000611712 C8orf46Q8TAG6 207 aa7.03□□□□□ -1.28
LIG4-204ENST00000611712 POLR3KQ9Y2Y1 108 aaPredicted RBP7.03□□□□□ -1.28
LIG4-204ENST00000611712 CREBBPQ92793 2442 aa7.03□□□□□ -1.28
LIG4-204ENST00000611712 IGHV3OR16-8A0A075B7F1 116 aa7.03□□□□□ -1.28
LIG4-204ENST00000611712 IGHV1-3A0A0C4DH29 117 aa7.03□□□□□ -1.28
LIG4-204ENST00000611712 GPX1P07203 203 aa7.03□□□□□ -1.28
LIG4-204ENST00000611712 RPL15P61313 204 aaKnown RBP7.03□□□□□ -1.28
LIG4-204ENST00000611712 SPACA3Q8IXA5 215 aa7.03□□□□□ -1.28
LIG4-204ENST00000611712 NUP35Q8NFH5 326 aa7.03□□□□□ -1.28
LIG4-204ENST00000611712 A0A1B0GUT8 65 aa7.03□□□□□ -1.28
LIG4-204ENST00000611712 GOSR1O95249 250 aa7.03□□□□□ -1.28
LIG4-204ENST00000611712 UTF1Q5T230 341 aa7.03□□□□□ -1.28
LIG4-204ENST00000611712 KIR3DL3Q8N743 410 aa7.03□□□□□ -1.28
LIG4-204ENST00000611712 TNFRSF14Q92956 283 aa7.03□□□□□ -1.28
LIG4-204ENST00000611712 C2orf88Q9BSF0 95 aa7.03□□□□□ -1.28
LIG4-204ENST00000611712 OTORQ9NRC9 128 aa7.03□□□□□ -1.28
LIG4-204ENST00000611712 SIGLEC9Q9Y336 463 aa7.03□□□□□ -1.28
LIG4-204ENST00000611712 E7EQL1 145 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 EREGO14944 169 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 SIAH2O43255 324 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 OR2J3O76001 311 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 HLA-DRB1P01911 266 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 RPL7P18124 248 aaKnown RBP7.02□□□□□ -1.29
LIG4-204ENST00000611712 S100A4P26447 101 aaKnown RBP7.02□□□□□ -1.29
LIG4-204ENST00000611712 TCTAP57738 103 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 ASPHD1Q5U4P2 390 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 EXOC3-AS1Q8N2X6 119 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 TRGV9Q99603 122 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 TRAV8-1A0A0A6YYK1 113 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 NBR2O15453 112 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 EIF4EBP1Q13541 118 aaPredicted RBP7.02□□□□□ -1.29
LIG4-204ENST00000611712 GUSBP1Q15486 140 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 CYB5R2Q6BCY4 276 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 UNQ5815/PRO19632Q6UWF5 114 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 ZNF329Q86UD4 541 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 TPSG1Q9NRR2 321 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.02□□□□□ -1.29
LIG4-204ENST00000611712 MUC21A0A0G2JKD1 596 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 MUC21A0A140T8X8 626 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 CBY3A6NI87 242 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 FAM106CPP0CH98 169 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 CDKN1AP38936 164 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 Q0VG73 95 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 TWIST1Q15672 202 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 ZNF672Q499Z4 452 aaPredicted RBP7.02□□□□□ -1.29
LIG4-204ENST00000611712 TMEM155Q4W5P6 130 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 MUC21Q5SSG8 566 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 LCN12Q6JVE5 192 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 ST6GALNAC6Q969X2 333 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 VKORC1Q9BQB6 163 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 AP5S1Q9NUS5 200 aa7.02□□□□□ -1.29
LIG4-204ENST00000611712 OR4C46A6NHA9 309 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 TCRAP04437 139 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 LOXP28300 417 aaPredicted RBP7.01□□□□□ -1.29
LIG4-204ENST00000611712 RELQ04864 619 aaPredicted RBP7.01□□□□□ -1.29
LIG4-204ENST00000611712 PRR30Q53SZ7 412 aaPredicted RBP7.01□□□□□ -1.29
LIG4-204ENST00000611712 Q6ZWC4 215 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 RNF125Q96EQ8 232 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms