RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 PCNPQ8WW12 178 aaKnown RBP8.83□□□□□ -1
LINC00539-204ENST00000608957 ACY3Q96HD9 319 aa8.83□□□□□ -1
LINC00539-204ENST00000608957 FANCD2OSQ96PS1 177 aa8.83□□□□□ -1
LINC00539-204ENST00000608957 GGTLC1Q9BX51 225 aa8.83□□□□□ -1
LINC00539-204ENST00000608957 KCNIP2Q9NS61 270 aa8.83□□□□□ -1
LINC00539-204ENST00000608957 ZNF355PQ9NSJ1 428 aa8.83□□□□□ -1
LINC00539-204ENST00000608957 PLA2G2EQ9NZK7 142 aa8.83□□□□□ -1
LINC00539-204ENST00000608957 ZNF705EA8MWA4 302 aaPredicted RBP8.82□□□□□ -1
LINC00539-204ENST00000608957 K7EIM0 57 aa8.82□□□□□ -1
LINC00539-204ENST00000608957 TRBV12-3P01733 135 aa8.82□□□□□ -1
LINC00539-204ENST00000608957 HIST1H1BP16401 226 aaKnown RBP8.82□□□□□ -1
LINC00539-204ENST00000608957 CAMLGP49069 296 aa8.82□□□□□ -1
LINC00539-204ENST00000608957 RND2P52198 227 aa8.82□□□□□ -1
LINC00539-204ENST00000608957 SERF2P84101 59 aa8.82□□□□□ -1
LINC00539-204ENST00000608957 RAB31Q13636 194 aa8.82□□□□□ -1
LINC00539-204ENST00000608957 MLANAQ16655 118 aa8.82□□□□□ -1
LINC00539-204ENST00000608957 ACSM6Q6P461 480 aa8.82□□□□□ -1
LINC00539-204ENST00000608957 THAP8Q8NA92 274 aa8.82□□□□□ -1
LINC00539-204ENST00000608957 B9D2Q9BPU9 175 aa8.82□□□□□ -1
LINC00539-204ENST00000608957 THYN1Q9P016 225 aa8.82□□□□□ -1
LINC00539-204ENST00000608957 MRPL36Q9P0J6 103 aaKnown RBP8.82□□□□□ -1
LINC00539-204ENST00000608957 IGHV3-21A0A0B4J1V1 117 aa8.81□□□□□ -1
LINC00539-204ENST00000608957 ANKRD34BA5PLL1 514 aa8.81□□□□□ -1
LINC00539-204ENST00000608957 AGPAT2O15120 278 aa8.81□□□□□ -1
LINC00539-204ENST00000608957 BRI3O95415 125 aa8.81□□□□□ -1
LINC00539-204ENST00000608957 IGHV3-48P01763 117 aa8.81□□□□□ -1
LINC00539-204ENST00000608957 ELLP55199 621 aaPredicted RBP8.81□□□□□ -1
LINC00539-204ENST00000608957 KLK9Q2XQG4 91 aa8.81□□□□□ -1
LINC00539-204ENST00000608957 FFAR4Q5NUL3 377 aa8.81□□□□□ -1
LINC00539-204ENST00000608957 DPPA3Q6W0C5 159 aa8.81□□□□□ -1
LINC00539-204ENST00000608957 TMEM116Q8NCL8 245 aa8.81□□□□□ -1
LINC00539-204ENST00000608957 NPIPB3Q92617 1050 aa8.81□□□□□ -1
LINC00539-204ENST00000608957 SAT2Q96F10 170 aaPredicted RBP8.81□□□□□ -1
LINC00539-204ENST00000608957 KLK9Q9UKQ9 250 aa8.81□□□□□ -1
LINC00539-204ENST00000608957 PXMP4Q9Y6I8 212 aa8.81□□□□□ -1
LINC00539-204ENST00000608957 IGKV1OR2-108A0A075B7D4 117 aa8.8□□□□□ -1
LINC00539-204ENST00000608957 SAP30O75446 220 aa8.8□□□□□ -1
LINC00539-204ENST00000608957 OR2J3O76001 311 aa8.8□□□□□ -1
LINC00539-204ENST00000608957 MBP02144 154 aa8.8□□□□□ -1
LINC00539-204ENST00000608957 OR10J1P30954 320 aa8.8□□□□□ -1
LINC00539-204ENST00000608957 INSL3P51460 131 aa8.8□□□□□ -1
LINC00539-204ENST00000608957 NDUFA5Q16718 116 aa8.8□□□□□ -1
LINC00539-204ENST00000608957 TMEM41BQ5BJD5 291 aa8.8□□□□□ -1
LINC00539-204ENST00000608957 MIC13Q5XKP0 118 aa8.8□□□□□ -1
LINC00539-204ENST00000608957 ZNF343Q6P1L6 599 aa8.8□□□□□ -1
LINC00539-204ENST00000608957 Q6ZRG5 221 aa8.8□□□□□ -1
LINC00539-204ENST00000608957 CYP2G1PQ6ZSU1 146 aa8.8□□□□□ -1
LINC00539-204ENST00000608957 OR4X1Q8NH49 305 aa8.8□□□□□ -1
LINC00539-204ENST00000608957 FAM213BQ8TBF2 198 aa8.8□□□□□ -1
LINC00539-204ENST00000608957 CXorf58Q96LI9 332 aa8.8□□□□□ -1
LINC00539-204ENST00000608957 FBXL7Q9UJT9 491 aa8.8□□□□□ -1
LINC00539-204ENST00000608957 SLC45A2Q9UMX9 530 aa8.8□□□□□ -1
LINC00539-204ENST00000608957 ZNF256Q9Y2P7 627 aaPredicted RBP8.8□□□□□ -1
LINC00539-204ENST00000608957 IGKV1D-37A0A075B6S9 117 aa8.79□□□□□ -1
LINC00539-204ENST00000608957 TRBV9A0A0B4J1U6 114 aa8.79□□□□□ -1
LINC00539-204ENST00000608957 MFSD2BA6NFX1 497 aa8.79□□□□□ -1
LINC00539-204ENST00000608957 ZFP92A6NM28 416 aa8.79□□□□□ -1
LINC00539-204ENST00000608957 NDUFB8O95169 186 aa8.79□□□□□ -1
LINC00539-204ENST00000608957 RPL29P47914 159 aaKnown RBP8.79□□□□□ -1
LINC00539-204ENST00000608957 FHITP49789 147 aa8.79□□□□□ -1
LINC00539-204ENST00000608957 RAB2AP61019 212 aa8.79□□□□□ -1
LINC00539-204ENST00000608957 B2MP61769 119 aa8.79□□□□□ -1
LINC00539-204ENST00000608957 BLOC1S1P78537 153 aa8.79□□□□□ -1
LINC00539-204ENST00000608957 RHOGP84095 191 aa8.79□□□□□ -1
LINC00539-204ENST00000608957 ACOT6Q3I5F7 207 aaPredicted RBP8.79□□□□□ -1
LINC00539-204ENST00000608957 IL34Q6ZMJ4 242 aa8.79□□□□□ -1
LINC00539-204ENST00000608957 STPG3Q8N7X2 389 aa8.79□□□□□ -1
LINC00539-204ENST00000608957 NECAP1Q8NC96 275 aa8.79□□□□□ -1
LINC00539-204ENST00000608957 VN1R17PQ8TDU5 208 aa8.79□□□□□ -1
LINC00539-204ENST00000608957 TRGV9Q99603 122 aa8.79□□□□□ -1
LINC00539-204ENST00000608957 VSIRQ9H7M9 311 aa8.79□□□□□ -1
LINC00539-204ENST00000608957 RPRMQ9NS64 109 aa8.79□□□□□ -1
LINC00539-204ENST00000608957 C21orf62Q9NYP8 219 aa8.79□□□□□ -1
LINC00539-204ENST00000608957 ZMAT5Q9UDW3 170 aaKnown RBP8.79□□□□□ -1
LINC00539-204ENST00000608957 A0A0G2JLM5 398 aa8.78□□□□□ -1
LINC00539-204ENST00000608957 LINC00862A6NCI5 91 aa8.78□□□□□ -1
LINC00539-204ENST00000608957 FAM223BA6NKX1 122 aa8.78□□□□□ -1
LINC00539-204ENST00000608957 CLN5O75503 358 aa8.78□□□□□ -1
LINC00539-204ENST00000608957 IGLC1P0CG04 106 aa8.78□□□□□ -1
LINC00539-204ENST00000608957 M6PRP20645 277 aa8.78□□□□□ -1
LINC00539-204ENST00000608957 NPBWR1P48145 328 aa8.78□□□□□ -1
LINC00539-204ENST00000608957 MFAP4P55083 255 aa8.78□□□□□ -1
LINC00539-204ENST00000608957 PRR20EP86478 221 aa8.78□□□□□ -1
LINC00539-204ENST00000608957 PRR20CP86479 221 aa8.78□□□□□ -1
LINC00539-204ENST00000608957 PRR20DP86480 221 aa8.78□□□□□ -1
LINC00539-204ENST00000608957 PRR20BP86481 221 aa8.78□□□□□ -1
LINC00539-204ENST00000608957 PRR20AP86496 221 aa8.78□□□□□ -1
LINC00539-204ENST00000608957 KLF5Q13887 457 aaPredicted RBP8.78□□□□□ -1
LINC00539-204ENST00000608957 C15orf32Q32M92 178 aa8.78□□□□□ -1
LINC00539-204ENST00000608957 PXDC1Q5TGL8 231 aa8.78□□□□□ -1
LINC00539-204ENST00000608957 FAM223AQ8IWN6 122 aa8.78□□□□□ -1
LINC00539-204ENST00000608957 BPIFCQ8NFQ6 507 aa8.78□□□□□ -1
LINC00539-204ENST00000608957 SLC39A9Q9NUM3 307 aa8.78□□□□□ -1
LINC00539-204ENST00000608957 HUWE1Q7Z6Z7 4374 aaKnown RBP8.77□□□□□ -1.01
LINC00539-204ENST00000608957 BMPR1BO00238 502 aa8.77□□□□□ -1.01
LINC00539-204ENST00000608957 SCGB2A1O75556 95 aa8.77□□□□□ -1.01
LINC00539-204ENST00000608957 YIF1AO95070 293 aa8.77□□□□□ -1.01
LINC00539-204ENST00000608957 LINC00869P0C866 280 aa8.77□□□□□ -1.01
LINC00539-204ENST00000608957 GP9P14770 177 aa8.77□□□□□ -1.01
LINC00539-204ENST00000608957 FCGR2BP31994 310 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms