RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 OR51A2Q8NGJ7 313 aa0.64□□□□□ -2.31
RNU6-88P-201ENST00000606801 OR8D4Q8NGM9 314 aa0.64□□□□□ -2.31
RNU6-88P-201ENST00000606801 SLC25A40Q8TBP6 338 aa0.64□□□□□ -2.31
RNU6-88P-201ENST00000606801 C2orf50Q96LR7 162 aa0.64□□□□□ -2.31
RNU6-88P-201ENST00000606801 GLTPQ9NZD2 209 aa0.64□□□□□ -2.31
RNU6-88P-201ENST00000606801 COL1A1P02452 1464 aaPredicted RBP0.64□□□□□ -2.31
RNU6-88P-201ENST00000606801 PCF11O94913 1555 aaKnown RBP0.64□□□□□ -2.31
RNU6-88P-201ENST00000606801 SIP14410 1827 aa0.64□□□□□ -2.31
RNU6-88P-201ENST00000606801 ZNF736B4DX44 427 aaPredicted RBP0.63□□□□□ -2.31
RNU6-88P-201ENST00000606801 HIST1H3AP68431 136 aa0.63□□□□□ -2.31
RNU6-88P-201ENST00000606801 H3F3AP84243 136 aa0.63□□□□□ -2.31
RNU6-88P-201ENST00000606801 ESRGQ1W209 222 aa0.63□□□□□ -2.31
RNU6-88P-201ENST00000606801 SPRNQ5BIV9 151 aa0.63□□□□□ -2.31
RNU6-88P-201ENST00000606801 GDF5OSQ5U4N7 250 aa0.63□□□□□ -2.31
RNU6-88P-201ENST00000606801 Q6Q795 121 aa0.63□□□□□ -2.31
RNU6-88P-201ENST00000606801 Q8IYB0 196 aa0.63□□□□□ -2.31
RNU6-88P-201ENST00000606801 HIST1H2BLQ99880 126 aa0.63□□□□□ -2.31
RNU6-88P-201ENST00000606801 TLNRD1Q9H1K6 362 aa0.63□□□□□ -2.31
RNU6-88P-201ENST00000606801 RNF122Q9H9V4 155 aa0.63□□□□□ -2.31
RNU6-88P-201ENST00000606801 SLC35A3Q9Y2D2 325 aa0.63□□□□□ -2.31
RNU6-88P-201ENST00000606801 PTPRFP10586 1907 aa0.63□□□□□ -2.31
RNU6-88P-201ENST00000606801 NUP98P52948 1817 aa0.63□□□□□ -2.31
RNU6-88P-201ENST00000606801 CITO14578 2027 aa0.62□□□□□ -2.31
RNU6-88P-201ENST00000606801 FANCMQ8IYD8 2048 aa0.62□□□□□ -2.31
RNU6-88P-201ENST00000606801 TMEM114B3SHH9 223 aa0.62□□□□□ -2.31
RNU6-88P-201ENST00000606801 PDE6DO43924 150 aa0.62□□□□□ -2.31
RNU6-88P-201ENST00000606801 C8GP07360 202 aa0.62□□□□□ -2.31
RNU6-88P-201ENST00000606801 PPIBP23284 216 aaKnown RBP0.62□□□□□ -2.31
RNU6-88P-201ENST00000606801 ERVS71-1P61550 626 aa0.62□□□□□ -2.31
RNU6-88P-201ENST00000606801 CCL7P80098 99 aa0.62□□□□□ -2.31
RNU6-88P-201ENST00000606801 SOSTDC1Q6X4U4 206 aa0.62□□□□□ -2.31
RNU6-88P-201ENST00000606801 PPP1R14BQ96C90 147 aa0.62□□□□□ -2.31
RNU6-88P-201ENST00000606801 TRIM4Q9C037 500 aa0.62□□□□□ -2.31
RNU6-88P-201ENST00000606801 CDC42SE1Q9NRR8 79 aa0.62□□□□□ -2.31
RNU6-88P-201ENST00000606801 UTP11Q9Y3A2 253 aaKnown RBP0.62□□□□□ -2.31
RNU6-88P-201ENST00000606801 PHRF1Q9P1Y6 1649 aaKnown RBP0.62□□□□□ -2.31
RNU6-88P-201ENST00000606801 MYO5AQ9Y4I1 1855 aaKnown RBP0.62□□□□□ -2.31
RNU6-88P-201ENST00000606801 ZDBF2Q9HCK1 2354 aa0.62□□□□□ -2.31
RNU6-88P-201ENST00000606801 RTL1A6NKG5 1358 aa0.61□□□□□ -2.31
RNU6-88P-201ENST00000606801 C7orf71A4D174 169 aa0.61□□□□□ -2.31
RNU6-88P-201ENST00000606801 PROSCO94903 275 aa0.61□□□□□ -2.31
RNU6-88P-201ENST00000606801 CYBAP13498 195 aa0.61□□□□□ -2.31
RNU6-88P-201ENST00000606801 ZNF25P17030 456 aaPredicted RBP0.61□□□□□ -2.31
RNU6-88P-201ENST00000606801 KRTAP19-3Q7Z4W3 81 aa0.61□□□□□ -2.31
RNU6-88P-201ENST00000606801 LINC00301Q8NCQ3 95 aa0.61□□□□□ -2.31
RNU6-88P-201ENST00000606801 BCL2L10Q9HD36 194 aa0.61□□□□□ -2.31
RNU6-88P-201ENST00000606801 ACER3Q9NUN7 267 aa0.61□□□□□ -2.31
RNU6-88P-201ENST00000606801 NHP2Q9NX24 153 aaKnown RBP0.61□□□□□ -2.31
RNU6-88P-201ENST00000606801 SLC22A13Q9Y226 551 aa0.61□□□□□ -2.31
RNU6-88P-201ENST00000606801 CHCHD2Q9Y6H1 151 aaPredicted RBP0.61□□□□□ -2.31
RNU6-88P-201ENST00000606801 MYLKQ15746 1914 aa0.61□□□□□ -2.31
RNU6-88P-201ENST00000606801 TET1Q8NFU7 2136 aa0.61□□□□□ -2.31
RNU6-88P-201ENST00000606801 TRAV4A0A0B4J268 109 aa0.6□□□□□ -2.31
RNU6-88P-201ENST00000606801 CCDC160A6NGH7 325 aa0.6□□□□□ -2.31
RNU6-88P-201ENST00000606801 CYB5BO43169 146 aa0.6□□□□□ -2.31
RNU6-88P-201ENST00000606801 SERPINB9P50453 376 aa0.6□□□□□ -2.31
RNU6-88P-201ENST00000606801 DYNLT1P63172 113 aa0.6□□□□□ -2.31
RNU6-88P-201ENST00000606801 TEX261Q6UWH6 196 aa0.6□□□□□ -2.31
RNU6-88P-201ENST00000606801 ZGRF1Q86YA3 2104 aa0.6□□□□□ -2.31
RNU6-88P-201ENST00000606801 CLECL1Q8IZS7 167 aa0.6□□□□□ -2.31
RNU6-88P-201ENST00000606801 Q8N6K4 173 aa0.6□□□□□ -2.31
RNU6-88P-201ENST00000606801 STAG3L4Q8TBR4 150 aa0.6□□□□□ -2.31
RNU6-88P-201ENST00000606801 SLAMF6Q96DU3 332 aa0.6□□□□□ -2.31
RNU6-88P-201ENST00000606801 RASL12Q9NYN1 266 aa0.6□□□□□ -2.31
RNU6-88P-201ENST00000606801 TVP23BQ9NYZ1 205 aa0.6□□□□□ -2.31
RNU6-88P-201ENST00000606801 FBXO5Q9UKT4 447 aa0.6□□□□□ -2.31
RNU6-88P-201ENST00000606801 U3KQ87 197 aa0.6□□□□□ -2.31
RNU6-88P-201ENST00000606801 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.59□□□□□ -2.31
RNU6-88P-201ENST00000606801 CLDN25C9JDP6 229 aa0.59□□□□□ -2.31
RNU6-88P-201ENST00000606801 GADD45GO95257 159 aa0.59□□□□□ -2.31
RNU6-88P-201ENST00000606801 CTXN2P0C2S0 81 aa0.59□□□□□ -2.31
RNU6-88P-201ENST00000606801 MPV17LQ2QL34 196 aa0.59□□□□□ -2.31
RNU6-88P-201ENST00000606801 OR2T10Q8NGZ9 312 aa0.59□□□□□ -2.31
RNU6-88P-201ENST00000606801 PATE1Q8WXA2 126 aa0.59□□□□□ -2.31
RNU6-88P-201ENST00000606801 MYH2Q9UKX2 1941 aa0.59□□□□□ -2.32
RNU6-88P-201ENST00000606801 CAMSAP1Q5T5Y3 1602 aa0.59□□□□□ -2.32
RNU6-88P-201ENST00000606801 FREM3P0C091 2139 aa0.59□□□□□ -2.32
RNU6-88P-201ENST00000606801 AP3S2P59780 193 aa0.58□□□□□ -2.32
RNU6-88P-201ENST00000606801 AMELYQ99218 206 aa0.58□□□□□ -2.32
RNU6-88P-201ENST00000606801 SIGMAR1Q99720 223 aa0.58□□□□□ -2.32
RNU6-88P-201ENST00000606801 PRADC1Q9BSG0 188 aa0.58□□□□□ -2.32
RNU6-88P-201ENST00000606801 TMEM126AQ9H061 195 aa0.58□□□□□ -2.32
RNU6-88P-201ENST00000606801 C14orf132Q9NPU4 83 aa0.58□□□□□ -2.32
RNU6-88P-201ENST00000606801 FAM159BA6NKW6 160 aa0.57□□□□□ -2.32
RNU6-88P-201ENST00000606801 CCL25O15444 150 aa0.57□□□□□ -2.32
RNU6-88P-201ENST00000606801 OR7C1O76099 320 aaPredicted RBP0.57□□□□□ -2.32
RNU6-88P-201ENST00000606801 PIGPP57054 158 aa0.57□□□□□ -2.32
RNU6-88P-201ENST00000606801 RHOBP62745 196 aa0.57□□□□□ -2.32
RNU6-88P-201ENST00000606801 SLC30A7Q8NEW0 376 aa0.57□□□□□ -2.32
RNU6-88P-201ENST00000606801 TEX47Q8TBZ9 253 aa0.57□□□□□ -2.32
RNU6-88P-201ENST00000606801 FAM172AQ8WUF8 416 aa0.57□□□□□ -2.32
RNU6-88P-201ENST00000606801 B4DSR2 109 aa0.56□□□□□ -2.32
RNU6-88P-201ENST00000606801 ATP5G3P48201 142 aa0.56□□□□□ -2.32
RNU6-88P-201ENST00000606801 OR11H6Q8NGC7 330 aa0.56□□□□□ -2.32
RNU6-88P-201ENST00000606801 C6orf62Q9GZU0 229 aaPredicted RBP0.56□□□□□ -2.32
RNU6-88P-201ENST00000606801 PARVBQ9HBI1 364 aa0.56□□□□□ -2.32
RNU6-88P-201ENST00000606801 SPTBP11277 2137 aa0.56□□□□□ -2.32
RNU6-88P-201ENST00000606801 FMN1Q68DA7 1419 aa0.55□□□□□ -2.32
RNU6-88P-201ENST00000606801 N4BP2Q86UW6 1770 aaPredicted RBP0.55□□□□□ -2.32
RNU6-88P-201ENST00000606801 ARHGEF11O15085 1522 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms