RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 CCNKO75909 580 aa10.78□□□□□ -0.68
CTSA-211ENST00000606066 IL4P05112 153 aa10.78□□□□□ -0.68
CTSA-211ENST00000606066 PSG1P11464 419 aa10.78□□□□□ -0.68
CTSA-211ENST00000606066 CXCL3P19876 107 aa10.78□□□□□ -0.68
CTSA-211ENST00000606066 S100A11P31949 105 aa10.78□□□□□ -0.68
CTSA-211ENST00000606066 RRAS2P62070 204 aaPredicted RBP10.78□□□□□ -0.68
CTSA-211ENST00000606066 HBG1P69891 147 aa10.78□□□□□ -0.68
CTSA-211ENST00000606066 HBG2P69892 147 aa10.78□□□□□ -0.68
CTSA-211ENST00000606066 FCN2Q15485 313 aa10.78□□□□□ -0.68
CTSA-211ENST00000606066 RHPN1-AS1Q9BWJ2 59 aa10.78□□□□□ -0.68
CTSA-211ENST00000606066 PFDN2Q9UHV9 154 aa10.78□□□□□ -0.68
CTSA-211ENST00000606066 CHEK1O14757 476 aa10.77□□□□□ -0.69
CTSA-211ENST00000606066 CST7O76096 145 aa10.77□□□□□ -0.69
CTSA-211ENST00000606066 MPC2O95563 127 aa10.77□□□□□ -0.69
CTSA-211ENST00000606066 CD5P06127 495 aa10.77□□□□□ -0.69
CTSA-211ENST00000606066 ZNF90Q03938 601 aa10.77□□□□□ -0.69
CTSA-211ENST00000606066 SLC38A11Q08AI6 406 aa10.77□□□□□ -0.69
CTSA-211ENST00000606066 TMEM217Q8N7C4 229 aa10.77□□□□□ -0.69
CTSA-211ENST00000606066 PRR25Q96S07 402 aa10.77□□□□□ -0.69
CTSA-211ENST00000606066 IGKV1OR2-108A0A075B7D4 117 aa10.76□□□□□ -0.69
CTSA-211ENST00000606066 WI2-2373I1.2A0A1W2PRP0 233 aa10.76□□□□□ -0.69
CTSA-211ENST00000606066 IGSF23A1L1A6 192 aa10.76□□□□□ -0.69
CTSA-211ENST00000606066 H0YIZ8 118 aa10.76□□□□□ -0.69
CTSA-211ENST00000606066 HNRNPCP07910 306 aaKnown RBP eCLIP10.76□□□□□ -0.69
CTSA-211ENST00000606066 CRYBB3P26998 211 aa10.76□□□□□ -0.69
CTSA-211ENST00000606066 BAXQ07812 192 aa10.76□□□□□ -0.69
CTSA-211ENST00000606066 ARL16Q0P5N6 197 aa10.76□□□□□ -0.69
CTSA-211ENST00000606066 GUCA2BQ16661 112 aa10.76□□□□□ -0.69
CTSA-211ENST00000606066 ATP6V1FQ16864 119 aa10.76□□□□□ -0.69
CTSA-211ENST00000606066 TEPPQ6URK8 271 aa10.76□□□□□ -0.69
CTSA-211ENST00000606066 GTSCR1Q86UQ5 136 aa10.76□□□□□ -0.69
CTSA-211ENST00000606066 TMEM61Q8N0U2 210 aa10.76□□□□□ -0.69
CTSA-211ENST00000606066 LILRB2Q8N423 598 aa10.76□□□□□ -0.69
CTSA-211ENST00000606066 OR11H7Q8NGC8 314 aa10.76□□□□□ -0.69
CTSA-211ENST00000606066 THAP6Q8TBB0 222 aa10.76□□□□□ -0.69
CTSA-211ENST00000606066 RNF125Q96EQ8 232 aa10.76□□□□□ -0.69
CTSA-211ENST00000606066 GRAMD2BQ96HH9 432 aa10.76□□□□□ -0.69
CTSA-211ENST00000606066 OR5AC2Q9NZP5 309 aa10.76□□□□□ -0.69
CTSA-211ENST00000606066 RABAC1Q9UI14 185 aa10.76□□□□□ -0.69
CTSA-211ENST00000606066 IGHV3-49A0A0A0MS15 119 aa10.75□□□□□ -0.69
CTSA-211ENST00000606066 IZUMO1RA6ND01 250 aa10.75□□□□□ -0.69
CTSA-211ENST00000606066 S100A7P31151 101 aa10.75□□□□□ -0.69
CTSA-211ENST00000606066 NUP62P37198 522 aaPredicted RBP10.75□□□□□ -0.69
CTSA-211ENST00000606066 SELENOTP62341 195 aa10.75□□□□□ -0.69
CTSA-211ENST00000606066 FGL1Q08830 312 aa10.75□□□□□ -0.69
CTSA-211ENST00000606066 OR2F1Q13607 317 aa10.75□□□□□ -0.69
CTSA-211ENST00000606066 RAB31Q13636 194 aa10.75□□□□□ -0.69
CTSA-211ENST00000606066 DEFB121Q5J5C9 76 aa10.75□□□□□ -0.69
CTSA-211ENST00000606066 BPIFCQ8NFQ6 507 aa10.75□□□□□ -0.69
CTSA-211ENST00000606066 WDR89Q96FK6 387 aaPredicted RBP10.75□□□□□ -0.69
CTSA-211ENST00000606066 RNF2Q99496 336 aa10.75□□□□□ -0.69
CTSA-211ENST00000606066 SPAG8Q99932 426 aaPredicted RBP10.75□□□□□ -0.69
CTSA-211ENST00000606066 RNF126Q9BV68 326 aa10.75□□□□□ -0.69
CTSA-211ENST00000606066 PBDC1Q9BVG4 233 aa10.75□□□□□ -0.69
CTSA-211ENST00000606066 VSIRQ9H7M9 311 aa10.75□□□□□ -0.69
CTSA-211ENST00000606066 UQCC1Q9NVA1 299 aa10.75□□□□□ -0.69
CTSA-211ENST00000606066 IGHV3OR16-13A0A075B7E8 117 aa10.74□□□□□ -0.69
CTSA-211ENST00000606066 IGHV3-74A0A0B4J1X5 117 aa10.74□□□□□ -0.69
CTSA-211ENST00000606066 ZNF785A8K8V0 405 aa10.74□□□□□ -0.69
CTSA-211ENST00000606066 K7EIL1 84 aa10.74□□□□□ -0.69
CTSA-211ENST00000606066 TSPAN4O14817 238 aa10.74□□□□□ -0.69
CTSA-211ENST00000606066 GIPP09681 153 aaPredicted RBP10.74□□□□□ -0.69
CTSA-211ENST00000606066 LYZP61626 148 aa10.74□□□□□ -0.69
CTSA-211ENST00000606066 PAFAH1B2P68402 229 aa10.74□□□□□ -0.69
CTSA-211ENST00000606066 EWSR1Q01844 656 aaKnown RBP eCLIP10.74□□□□□ -0.69
CTSA-211ENST00000606066 USF2Q15853 346 aaPredicted RBP10.74□□□□□ -0.69
CTSA-211ENST00000606066 CYP2G1PQ6ZSU1 146 aa10.74□□□□□ -0.69
CTSA-211ENST00000606066 ST8SIA2Q92186 375 aa10.74□□□□□ -0.69
CTSA-211ENST00000606066 TMEM147Q9BVK8 224 aa10.74□□□□□ -0.69
CTSA-211ENST00000606066 IGHV3-66A0A0C4DH42 116 aa10.73□□□□□ -0.69
CTSA-211ENST00000606066 APOHP02749 345 aaPredicted RBP10.73□□□□□ -0.69
CTSA-211ENST00000606066 EIF2B2P49770 351 aaKnown RBP10.73□□□□□ -0.69
CTSA-211ENST00000606066 RAP2BP61225 183 aa10.73□□□□□ -0.69
CTSA-211ENST00000606066 VWC2Q2TAL6 325 aa10.73□□□□□ -0.69
CTSA-211ENST00000606066 ZNF546Q86UE3 836 aa10.73□□□□□ -0.69
CTSA-211ENST00000606066 MBD2Q9UBB5 411 aa10.73□□□□□ -0.69
CTSA-211ENST00000606066 LSM4Q9Y4Z0 139 aaKnown RBP10.73□□□□□ -0.69
CTSA-211ENST00000606066 SELENOKQ9Y6D0 94 aa10.73□□□□□ -0.69
CTSA-211ENST00000606066 SMAD5-AS1Q9Y6J3 95 aa10.73□□□□□ -0.69
CTSA-211ENST00000606066 U3KQE9 123 aa10.73□□□□□ -0.69
CTSA-211ENST00000606066 COL7A1Q02388 2944 aa10.72□□□□□ -0.69
CTSA-211ENST00000606066 OR4C46A6NHA9 309 aa10.72□□□□□ -0.69
CTSA-211ENST00000606066 LYL1P12980 280 aa10.72□□□□□ -0.69
CTSA-211ENST00000606066 RPL12P30050 165 aaKnown RBP10.72□□□□□ -0.69
CTSA-211ENST00000606066 AP2S1P53680 142 aaPredicted RBP10.72□□□□□ -0.69
CTSA-211ENST00000606066 RPL11P62913 178 aaKnown RBP10.72□□□□□ -0.69
CTSA-211ENST00000606066 NHLH2Q02577 135 aa10.72□□□□□ -0.69
CTSA-211ENST00000606066 FAM90A2PQ658T7 463 aa10.72□□□□□ -0.69
CTSA-211ENST00000606066 TCF24Q7RTU0 167 aa10.72□□□□□ -0.69
CTSA-211ENST00000606066 S100A7AQ86SG5 101 aa10.72□□□□□ -0.69
CTSA-211ENST00000606066 OR5C1Q8NGR4 320 aa10.72□□□□□ -0.69
CTSA-211ENST00000606066 PPP1R14BQ96C90 147 aa10.72□□□□□ -0.69
CTSA-211ENST00000606066 SLC45A2Q9UMX9 530 aa10.72□□□□□ -0.69
CTSA-211ENST00000606066 HELTA6NFD8 242 aa10.71□□□□□ -0.69
CTSA-211ENST00000606066 AGPAT2O15120 278 aa10.71□□□□□ -0.69
CTSA-211ENST00000606066 BUB3O43684 328 aa10.71□□□□□ -0.69
CTSA-211ENST00000606066 MPDU1O75352 247 aa10.71□□□□□ -0.69
CTSA-211ENST00000606066 DFFBO76075 338 aa10.71□□□□□ -0.69
CTSA-211ENST00000606066 ORM2P19652 201 aa10.71□□□□□ -0.69
CTSA-211ENST00000606066 GATA2P23769 480 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms