RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 NDUFB4O95168 129 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 NAPSAO96009 420 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 APCSP02743 223 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 LINC00271P0C7V0 271 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 MEOX1P50221 254 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 FHL1Q13642 323 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 FAM53BQ14153 422 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 OR1C1Q15619 314 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 FAM57BQ71RH2 274 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 SLC22A24Q8N4F4 322 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 LINC01356Q8N9X3 169 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 GATD1Q8NB37 220 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 ARHGAP5-AS1Q96IT6 56 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 KIR2DL4Q99706 377 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 TMEM222Q9H0R3 208 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 PLA2G2DQ9UNK4 145 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 EP300Q09472 2414 aaPredicted RBP3.83□□□□□ -1.8
LINC01109-201ENST00000603837 PTPRSQ13332 1948 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 MAP1BP46821 2468 aaKnown RBP3.83□□□□□ -1.8
LINC01109-201ENST00000603837 TRAV5A0A0B4J249 113 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 A1L4Q6 167 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 EPOPA6NHQ4 379 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 TMEM14DPA8MWL7 114 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 H3BMG7 143 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 CXCL13O43927 109 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 ZFAND5O76080 213 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 SLC25A5P05141 298 aaKnown RBP3.83□□□□□ -1.8
LINC01109-201ENST00000603837 FGF6P10767 208 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 EVI2AP22794 236 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 SLC35E4Q6ICL7 350 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 RBMXL3Q8N7X1 1067 aaKnown RBP3.83□□□□□ -1.8
LINC01109-201ENST00000603837 LINC00482Q8N8I6 264 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 OR4X2Q8NGF9 303 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 ATP6V0E2Q8NHE4 81 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 GTSF1Q8WW33 167 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 RIF1Q5UIP0 2472 aaKnown RBP3.83□□□□□ -1.8
LINC01109-201ENST00000603837 CACNA1CQ13936 2221 aa3.83□□□□□ -1.8
LINC01109-201ENST00000603837 PHF3Q92576 2039 aaKnown RBP3.82□□□□□ -1.8
LINC01109-201ENST00000603837 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.82□□□□□ -1.8
LINC01109-201ENST00000603837 A0A1W2PP11 408 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 H3BP45 60 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 NXPH3O95157 252 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 P01737 135 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 LYRM7Q5U5X0 104 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 FNDC7Q5VTL7 733 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 LYPD6Q86Y78 171 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 RPP25LQ8N5L8 163 aaKnown RBP3.82□□□□□ -1.8
LINC01109-201ENST00000603837 ZNF740Q8NDX6 193 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 WFDC5Q8TCV5 224 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 TNFRSF19Q9NS68 423 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 MPC1Q9Y5U8 109 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 EML5Q05BV3 1969 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 GPR179Q6PRD1 2367 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 CACNA1HO95180 2353 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 LOC107986453A0A1B0GWG9 222 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 LMX1BO60663 402 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 DBIP07108 87 aaKnown RBP3.82□□□□□ -1.8
LINC01109-201ENST00000603837 IGLC6P0CF74 106 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 MED14OSP0DP75 135 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 HLA-DOBP13765 273 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 ORM2P19652 201 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 TAS2R45P59539 299 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 FXYD4P59646 89 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 NMSQ5H8A3 153 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 MRPL2Q5T653 305 aaKnown RBP3.82□□□□□ -1.8
LINC01109-201ENST00000603837 SLC48A1Q6P1K1 146 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 KCTD18Q6PI47 426 aaPredicted RBP3.82□□□□□ -1.8
LINC01109-201ENST00000603837 SSX8Q7RTT4 187 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 VKORC1L1Q8N0U8 176 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 CYYR1Q96J86 154 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 TMEM59Q9BXS4 323 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 COL4A2P08572 1712 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 PTPRZ1P23471 2315 aaPredicted RBP3.82□□□□□ -1.8
LINC01109-201ENST00000603837 DYSFO75923 2080 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 KIF26BQ2KJY2 2108 aa3.82□□□□□ -1.8
LINC01109-201ENST00000603837 CXorf51AA0A1B0GTR3 108 aa3.81□□□□□ -1.8
LINC01109-201ENST00000603837 FAM90A26D6RGX4 464 aa3.81□□□□□ -1.8
LINC01109-201ENST00000603837 TMEM178BH3BS89 294 aa3.81□□□□□ -1.8
LINC01109-201ENST00000603837 LINC01565O15544 149 aa3.81□□□□□ -1.8
LINC01109-201ENST00000603837 LEPROTL1O95214 131 aa3.81□□□□□ -1.8
LINC01109-201ENST00000603837 IGKV1D-33P01593 117 aa3.81□□□□□ -1.8
LINC01109-201ENST00000603837 IGKV1-33P01594 117 aa3.81□□□□□ -1.8
LINC01109-201ENST00000603837 FAM106CPP0CH98 169 aa3.81□□□□□ -1.8
LINC01109-201ENST00000603837 HOXD3P31249 432 aaPredicted RBP3.81□□□□□ -1.8
LINC01109-201ENST00000603837 CXCL12P48061 93 aa3.81□□□□□ -1.8
LINC01109-201ENST00000603837 APOC4P55056 127 aa3.81□□□□□ -1.8
LINC01109-201ENST00000603837 CX3CL1P78423 397 aa3.81□□□□□ -1.8
LINC01109-201ENST00000603837 FAM106AQ4KMX7 169 aa3.81□□□□□ -1.8
LINC01109-201ENST00000603837 IBA57Q5T440 356 aaKnown RBP3.81□□□□□ -1.8
LINC01109-201ENST00000603837 LINC00173Q6ZV60 143 aa3.81□□□□□ -1.8
LINC01109-201ENST00000603837 C18orf15Q96N68 181 aa3.81□□□□□ -1.8
LINC01109-201ENST00000603837 PRADC1Q9BSG0 188 aa3.81□□□□□ -1.8
LINC01109-201ENST00000603837 PRORYQ9H606 182 aa3.81□□□□□ -1.8
LINC01109-201ENST00000603837 Q9H8V8 135 aa3.81□□□□□ -1.8
LINC01109-201ENST00000603837 TDRD6O60522 2096 aaKnown RBP3.81□□□□□ -1.8
LINC01109-201ENST00000603837 TMEM202A6NGA9 273 aa3.81□□□□□ -1.8
LINC01109-201ENST00000603837 H3BTX0 84 aa3.81□□□□□ -1.8
LINC01109-201ENST00000603837 ATP5G3P48201 142 aa3.81□□□□□ -1.8
LINC01109-201ENST00000603837 HILS1P60008 231 aa3.81□□□□□ -1.8
LINC01109-201ENST00000603837 MFAP5Q13361 173 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms