RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ARHGAP21Q5T5U3 1957 aa7.16□□□□□ -1.26
COMMD3-215ENST00000602574 A0A0J9YW62 118 aa7.15□□□□□ -1.26
COMMD3-215ENST00000602574 P04436 131 aa7.15□□□□□ -1.26
COMMD3-215ENST00000602574 GCHFRP30047 84 aa7.15□□□□□ -1.26
COMMD3-215ENST00000602574 GDF5OSQ5U4N7 250 aa7.15□□□□□ -1.26
COMMD3-215ENST00000602574 FAM19A1Q7Z5A9 133 aa7.15□□□□□ -1.26
COMMD3-215ENST00000602574 C3orf56Q8N813 242 aa7.15□□□□□ -1.26
COMMD3-215ENST00000602574 SLC25A2Q9BXI2 301 aa7.15□□□□□ -1.26
COMMD3-215ENST00000602574 C19orf25Q9UFG5 118 aaPredicted RBP7.15□□□□□ -1.26
COMMD3-215ENST00000602574 TAC3Q9UHF0 121 aa7.15□□□□□ -1.26
COMMD3-215ENST00000602574 TRAV2A0A0B4J234 112 aa7.15□□□□□ -1.27
COMMD3-215ENST00000602574 TRACP01848 142 aa7.15□□□□□ -1.27
COMMD3-215ENST00000602574 IL4P05112 153 aa7.15□□□□□ -1.27
COMMD3-215ENST00000602574 PSMB8P28062 276 aa7.15□□□□□ -1.27
COMMD3-215ENST00000602574 CD70P32970 193 aa7.15□□□□□ -1.27
COMMD3-215ENST00000602574 PKIGQ9Y2B9 76 aa7.15□□□□□ -1.27
COMMD3-215ENST00000602574 TRAV8-4A0A0B4J246 113 aa7.14□□□□□ -1.27
COMMD3-215ENST00000602574 CD7P09564 240 aa7.14□□□□□ -1.27
COMMD3-215ENST00000602574 PFN2P35080 140 aa7.14□□□□□ -1.27
COMMD3-215ENST00000602574 FKBP1BP68106 108 aa7.14□□□□□ -1.27
COMMD3-215ENST00000602574 CST6Q15828 149 aa7.14□□□□□ -1.27
COMMD3-215ENST00000602574 RSPO2Q6UXX9 243 aaPredicted RBP7.14□□□□□ -1.27
COMMD3-215ENST00000602574 RPS19BP1Q86WX3 136 aaKnown RBP7.14□□□□□ -1.27
COMMD3-215ENST00000602574 AMN1Q8IY45 258 aa7.14□□□□□ -1.27
COMMD3-215ENST00000602574 SCN3AQ9NY46 2000 aa7.14□□□□□ -1.27
COMMD3-215ENST00000602574 MGST3O14880 152 aa7.13□□□□□ -1.27
COMMD3-215ENST00000602574 MFAP2P55001 183 aa7.13□□□□□ -1.27
COMMD3-215ENST00000602574 ZNF793Q6ZN11 406 aa7.13□□□□□ -1.27
COMMD3-215ENST00000602574 Q71RC1 249 aaPredicted RBP7.13□□□□□ -1.27
COMMD3-215ENST00000602574 PCP2Q8IVA1 136 aa7.13□□□□□ -1.27
COMMD3-215ENST00000602574 OR5AS1Q8N127 324 aa7.13□□□□□ -1.27
COMMD3-215ENST00000602574 NPCDR1Q9BY65 106 aa7.13□□□□□ -1.27
COMMD3-215ENST00000602574 HEYLQ9NQ87 328 aaPredicted RBP7.13□□□□□ -1.27
COMMD3-215ENST00000602574 TCF19Q9Y242 345 aa7.13□□□□□ -1.27
COMMD3-215ENST00000602574 TRBV25-1A0A075B6N4 114 aa7.13□□□□□ -1.27
COMMD3-215ENST00000602574 EPM2AB3EWF7 344 aa7.13□□□□□ -1.27
COMMD3-215ENST00000602574 SPINK4O60575 86 aa7.13□□□□□ -1.27
COMMD3-215ENST00000602574 LGALS1P09382 135 aaKnown RBP7.13□□□□□ -1.27
COMMD3-215ENST00000602574 FOXA3P55318 350 aaPredicted RBP7.13□□□□□ -1.27
COMMD3-215ENST00000602574 FBXW4P57775 412 aa7.13□□□□□ -1.27
COMMD3-215ENST00000602574 RSPO1Q2MKA7 263 aaPredicted RBP7.13□□□□□ -1.27
COMMD3-215ENST00000602574 CENPWQ5EE01 88 aa7.13□□□□□ -1.27
COMMD3-215ENST00000602574 ZNF493Q6ZR52 646 aa7.13□□□□□ -1.27
COMMD3-215ENST00000602574 TBC1D26Q86UD7 250 aa7.13□□□□□ -1.27
COMMD3-215ENST00000602574 RPRMLQ8N4K4 120 aa7.13□□□□□ -1.27
COMMD3-215ENST00000602574 RFESDQ8TAC1 157 aa7.13□□□□□ -1.27
COMMD3-215ENST00000602574 NT5CQ8TCD5 201 aa7.13□□□□□ -1.27
COMMD3-215ENST00000602574 THADAQ6YHU6 1953 aa7.13□□□□□ -1.27
COMMD3-215ENST00000602574 LRRK1Q38SD2 2015 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 MYMXA0A1B0GTQ4 84 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 K7EM74 188 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 LMX1BO60663 402 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 OXTP01178 125 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 CD3EP07766 207 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 LINC01559Q495D7 138 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 FAM214BQ7L5A3 538 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 ZAR1Q86SH2 424 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 PILRAQ9UKJ1 303 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 TDRD6O60522 2096 aaKnown RBP7.12□□□□□ -1.27
COMMD3-215ENST00000602574 FAM236DA0A1B0GTK5 79 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 NDUFC2-KCTD14E9PQ53 114 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 H3BP45 60 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 K7EQS6 105 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 NPYP01303 97 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 PRNPP04156 253 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 FAM236CP0DP71 79 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 FXYD4P59646 89 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 HBBP68871 147 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 TMEM52BQ4KMG9 183 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 TMEM200BQ69YZ2 307 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 PDPNQ86YL7 162 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 EXOC3-AS1Q8N2X6 119 aa7.12□□□□□ -1.27
COMMD3-215ENST00000602574 F11RQ9Y624 299 aaKnown RBP7.12□□□□□ -1.27
COMMD3-215ENST00000602574 A0A1W2PQU0 124 aa7.11□□□□□ -1.27
COMMD3-215ENST00000602574 TMEM178BH3BS89 294 aa7.11□□□□□ -1.27
COMMD3-215ENST00000602574 TIMM23O14925 209 aa7.11□□□□□ -1.27
COMMD3-215ENST00000602574 CTXN1P60606 82 aa7.11□□□□□ -1.27
COMMD3-215ENST00000602574 FHL5Q5TD97 284 aa7.11□□□□□ -1.27
COMMD3-215ENST00000602574 ZC2HC1BQ5TFG8 222 aa7.11□□□□□ -1.27
COMMD3-215ENST00000602574 SLC25A48Q6ZT89 311 aaKnown RBP7.11□□□□□ -1.27
COMMD3-215ENST00000602574 AAED1Q7RTV5 226 aa7.11□□□□□ -1.27
COMMD3-215ENST00000602574 C1orf158Q8N1D5 194 aa7.11□□□□□ -1.27
COMMD3-215ENST00000602574 FAM110DQ8TAY7 271 aaPredicted RBP7.11□□□□□ -1.27
COMMD3-215ENST00000602574 COX14Q96I36 57 aa7.11□□□□□ -1.27
COMMD3-215ENST00000602574 CYYR1Q96J86 154 aa7.11□□□□□ -1.27
COMMD3-215ENST00000602574 KLK5Q9Y337 293 aaPredicted RBP7.11□□□□□ -1.27
COMMD3-215ENST00000602574 PCDH15Q96QU1 1955 aa7.11□□□□□ -1.27
COMMD3-215ENST00000602574 PCNX3Q9H6A9 2034 aa7.11□□□□□ -1.27
COMMD3-215ENST00000602574 TRBV7-3A0A075B6L6 115 aa7.11□□□□□ -1.27
COMMD3-215ENST00000602574 TRAV8-1A0A0A6YYK1 113 aa7.11□□□□□ -1.27
COMMD3-215ENST00000602574 HOXA3O43365 443 aaPredicted RBP7.11□□□□□ -1.27
COMMD3-215ENST00000602574 CXCL17Q6UXB2 119 aa7.11□□□□□ -1.27
COMMD3-215ENST00000602574 EPDR1Q9UM22 224 aa7.11□□□□□ -1.27
COMMD3-215ENST00000602574 HEATR5BQ9P2D3 2071 aa7.1□□□□□ -1.27
COMMD3-215ENST00000602574 IGLV2-8P01709 118 aa7.1□□□□□ -1.27
COMMD3-215ENST00000602574 NXPH1P58417 271 aa7.1□□□□□ -1.27
COMMD3-215ENST00000602574 PLPP4Q5VZY2 271 aa7.1□□□□□ -1.27
COMMD3-215ENST00000602574 C2orf48Q96LS8 159 aa7.1□□□□□ -1.27
COMMD3-215ENST00000602574 ZMAT4Q9H898 229 aa7.1□□□□□ -1.27
COMMD3-215ENST00000602574 PHF3Q92576 2039 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms