RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 PI3P19957 117 aa11.11□□□□□ -0.63
SSBP4-211ENST00000601614 PSMB3P49720 205 aa11.11□□□□□ -0.63
SSBP4-211ENST00000601614 TSPAN5P62079 268 aa11.11□□□□□ -0.63
SSBP4-211ENST00000601614 NPIPB3Q92617 1050 aa11.11□□□□□ -0.63
SSBP4-211ENST00000601614 C20orf173Q96LM9 149 aa11.11□□□□□ -0.63
SSBP4-211ENST00000601614 Q9H3A6 140 aa11.11□□□□□ -0.63
SSBP4-211ENST00000601614 ENY2Q9NPA8 101 aa11.11□□□□□ -0.63
SSBP4-211ENST00000601614 BLOC1S6Q9UL45 172 aa11.11□□□□□ -0.63
SSBP4-211ENST00000601614 A8MTW9 85 aa11.1□□□□□ -0.63
SSBP4-211ENST00000601614 M0QYG6 137 aa11.1□□□□□ -0.63
SSBP4-211ENST00000601614 RD3LP0DJH9 198 aa11.1□□□□□ -0.63
SSBP4-211ENST00000601614 SPARTQ8N0X7 666 aa11.1□□□□□ -0.63
SSBP4-211ENST00000601614 COQ8AQ8NI60 647 aa11.1□□□□□ -0.63
SSBP4-211ENST00000601614 IGF2BP2-AS1Q96M15 143 aa11.1□□□□□ -0.63
SSBP4-211ENST00000601614 UHRF2Q96PU4 802 aa11.1□□□□□ -0.63
SSBP4-211ENST00000601614 CRXO43186 299 aaPredicted RBP11.09□□□□□ -0.63
SSBP4-211ENST00000601614 SLC25A4P12235 298 aa11.09□□□□□ -0.63
SSBP4-211ENST00000601614 AZU1P20160 251 aa11.09□□□□□ -0.63
SSBP4-211ENST00000601614 ID1P41134 155 aa11.09□□□□□ -0.63
SSBP4-211ENST00000601614 RND3P61587 244 aa11.09□□□□□ -0.63
SSBP4-211ENST00000601614 C2orf83Q53S99 150 aa11.09□□□□□ -0.63
SSBP4-211ENST00000601614 TMEM69Q5SWH9 247 aa11.09□□□□□ -0.63
SSBP4-211ENST00000601614 GPX8Q8TED1 209 aa11.09□□□□□ -0.63
SSBP4-211ENST00000601614 RNF125Q96EQ8 232 aa11.09□□□□□ -0.63
SSBP4-211ENST00000601614 S100A16Q96FQ6 103 aaKnown RBP11.09□□□□□ -0.63
SSBP4-211ENST00000601614 C18orf15Q96N68 181 aa11.09□□□□□ -0.63
SSBP4-211ENST00000601614 TMEM208Q9BTX3 173 aa11.09□□□□□ -0.63
SSBP4-211ENST00000601614 MDFICQ9P1T7 246 aa11.09□□□□□ -0.63
SSBP4-211ENST00000601614 LOC100506127A0A0U1RQW1 187 aa11.08□□□□□ -0.64
SSBP4-211ENST00000601614 ATP5G1P05496 136 aa11.08□□□□□ -0.64
SSBP4-211ENST00000601614 PRSS3P35030 304 aa11.08□□□□□ -0.64
SSBP4-211ENST00000601614 HTR2BP41595 481 aa11.08□□□□□ -0.64
SSBP4-211ENST00000601614 ATP5G3P48201 142 aa11.08□□□□□ -0.64
SSBP4-211ENST00000601614 CLINT1Q14677 625 aa11.08□□□□□ -0.64
SSBP4-211ENST00000601614 SP6Q3SY56 376 aa11.08□□□□□ -0.64
SSBP4-211ENST00000601614 TTC32Q5I0X7 151 aa11.08□□□□□ -0.64
SSBP4-211ENST00000601614 UBE2NLQ5JXB2 153 aa11.08□□□□□ -0.64
SSBP4-211ENST00000601614 SPATA31B1PQ5VZV4 182 aa11.08□□□□□ -0.64
SSBP4-211ENST00000601614 EBLN2Q6P2I7 272 aa11.08□□□□□ -0.64
SSBP4-211ENST00000601614 Q6ZRN7 208 aaPredicted RBP11.08□□□□□ -0.64
SSBP4-211ENST00000601614 FRZBQ92765 325 aa11.08□□□□□ -0.64
SSBP4-211ENST00000601614 ACY3Q96HD9 319 aa11.08□□□□□ -0.64
SSBP4-211ENST00000601614 SRRM2Q9UQ35 2752 aaKnown RBP11.07□□□□□ -0.64
SSBP4-211ENST00000601614 M0R2Z0 102 aa11.07□□□□□ -0.64
SSBP4-211ENST00000601614 PGAM2P15259 253 aa11.07□□□□□ -0.64
SSBP4-211ENST00000601614 TGFBR1P36897 503 aa11.07□□□□□ -0.64
SSBP4-211ENST00000601614 PIGPP57054 158 aa11.07□□□□□ -0.64
SSBP4-211ENST00000601614 GABARAPL2P60520 117 aa11.07□□□□□ -0.64
SSBP4-211ENST00000601614 SPCS3P61009 180 aa11.07□□□□□ -0.64
SSBP4-211ENST00000601614 SPINK13Q1W4C9 94 aa11.07□□□□□ -0.64
SSBP4-211ENST00000601614 AARDQ4LEZ3 155 aa11.07□□□□□ -0.64
SSBP4-211ENST00000601614 RNASEH2CQ8TDP1 164 aaKnown RBP11.07□□□□□ -0.64
SSBP4-211ENST00000601614 C17orf77Q96MU5 243 aa11.07□□□□□ -0.64
SSBP4-211ENST00000601614 PBDC1Q9BVG4 233 aa11.07□□□□□ -0.64
SSBP4-211ENST00000601614 ZNF586Q9NXT0 402 aa11.07□□□□□ -0.64
SSBP4-211ENST00000601614 C3orf85A0A1B0GTC6 90 aa11.06□□□□□ -0.64
SSBP4-211ENST00000601614 SLC24A4Q8NFF2 622 aa11.06□□□□□ -0.64
SSBP4-211ENST00000601614 OR4C16Q8NGL9 310 aa11.06□□□□□ -0.64
SSBP4-211ENST00000601614 HEYLQ9NQ87 328 aaPredicted RBP11.06□□□□□ -0.64
SSBP4-211ENST00000601614 DOK5Q9P104 306 aa11.06□□□□□ -0.64
SSBP4-211ENST00000601614 CBY3A6NI87 242 aa11.05□□□□□ -0.64
SSBP4-211ENST00000601614 ANKRD65E5RJM6 399 aa11.05□□□□□ -0.64
SSBP4-211ENST00000601614 ISLRO14498 428 aa11.05□□□□□ -0.64
SSBP4-211ENST00000601614 SMR3BP02814 79 aaPredicted RBP11.05□□□□□ -0.64
SSBP4-211ENST00000601614 TSPOP30536 169 aa11.05□□□□□ -0.64
SSBP4-211ENST00000601614 LINC00315P59091 139 aa11.05□□□□□ -0.64
SSBP4-211ENST00000601614 KRTAP10-1P60331 282 aa11.05□□□□□ -0.64
SSBP4-211ENST00000601614 ESRGQ1W209 222 aa11.05□□□□□ -0.64
SSBP4-211ENST00000601614 TRIM16LQ309B1 348 aa11.05□□□□□ -0.64
SSBP4-211ENST00000601614 BAP18Q8IXM2 172 aa11.05□□□□□ -0.64
SSBP4-211ENST00000601614 SAMD12Q8N8I0 201 aa11.05□□□□□ -0.64
SSBP4-211ENST00000601614 OR11H7Q8NGC8 314 aa11.05□□□□□ -0.64
SSBP4-211ENST00000601614 ABHD1Q96SE0 405 aa11.05□□□□□ -0.64
SSBP4-211ENST00000601614 UPK3BQ9BT76 320 aa11.05□□□□□ -0.64
SSBP4-211ENST00000601614 IGKV1D-37A0A075B6S9 117 aa11.04□□□□□ -0.64
SSBP4-211ENST00000601614 A0A1W2PPQ1 181 aa11.04□□□□□ -0.64
SSBP4-211ENST00000601614 UCP1P25874 307 aa11.04□□□□□ -0.64
SSBP4-211ENST00000601614 SUPT4H1P63272 117 aaKnown RBP11.04□□□□□ -0.64
SSBP4-211ENST00000601614 ZNF90Q03938 601 aa11.04□□□□□ -0.64
SSBP4-211ENST00000601614 OR8G2PQ6IF36 304 aa11.04□□□□□ -0.64
SSBP4-211ENST00000601614 LHFPL1Q86WI0 220 aa11.04□□□□□ -0.64
SSBP4-211ENST00000601614 OR52E5Q8NH55 327 aa11.04□□□□□ -0.64
SSBP4-211ENST00000601614 LHFPL5Q8TAF8 219 aa11.04□□□□□ -0.64
SSBP4-211ENST00000601614 FCGR1BQ92637 280 aa11.04□□□□□ -0.64
SSBP4-211ENST00000601614 RRNAD1Q96FB5 475 aaKnown RBP11.04□□□□□ -0.64
SSBP4-211ENST00000601614 RPRMQ9NS64 109 aa11.04□□□□□ -0.64
SSBP4-211ENST00000601614 UBR4Q5T4S7 5183 aa11.04□□□□□ -0.64
SSBP4-211ENST00000601614 ATG12O94817 140 aa11.03□□□□□ -0.64
SSBP4-211ENST00000601614 INSP01308 110 aa11.03□□□□□ -0.64
SSBP4-211ENST00000601614 RCVRNP35243 200 aa11.03□□□□□ -0.64
SSBP4-211ENST00000601614 CNN1P51911 297 aaKnown RBP11.03□□□□□ -0.64
SSBP4-211ENST00000601614 ETFRF1Q6IPR1 90 aa11.03□□□□□ -0.64
SSBP4-211ENST00000601614 IZUMO2Q6UXV1 221 aa11.03□□□□□ -0.64
SSBP4-211ENST00000601614 RNASE11Q8TAA1 199 aaKnown RBP11.03□□□□□ -0.64
SSBP4-211ENST00000601614 ZNF486Q96H40 463 aaPredicted RBP11.03□□□□□ -0.64
SSBP4-211ENST00000601614 PGPEP1Q9NXJ5 209 aa11.03□□□□□ -0.64
SSBP4-211ENST00000601614 TRAV12-2A0A075B6T6 113 aa11.02□□□□□ -0.65
SSBP4-211ENST00000601614 TMEM127O75204 238 aa11.02□□□□□ -0.65
SSBP4-211ENST00000601614 NUP62P37198 522 aaPredicted RBP11.02□□□□□ -0.65
SSBP4-211ENST00000601614 LYZP61626 148 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms