RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 ZNF90Q03938 601 aa9.58□□□□□ -0.88
USE1-209ENST00000601592 OR2F1Q13607 317 aa9.58□□□□□ -0.88
USE1-209ENST00000601592 WFDC3Q8IUB2 231 aa9.58□□□□□ -0.88
USE1-209ENST00000601592 OR51G1Q8NGK1 321 aa9.58□□□□□ -0.88
USE1-209ENST00000601592 GRAMD2BQ96HH9 432 aa9.58□□□□□ -0.88
USE1-209ENST00000601592 SMIM8Q96KF7 97 aa9.58□□□□□ -0.88
USE1-209ENST00000601592 VSIRQ9H7M9 311 aa9.58□□□□□ -0.88
USE1-209ENST00000601592 U3KQK5 164 aa9.58□□□□□ -0.88
USE1-209ENST00000601592 K7EPK0 472 aa9.57□□□□□ -0.88
USE1-209ENST00000601592 DNASE2O00115 360 aaPredicted RBP9.57□□□□□ -0.88
USE1-209ENST00000601592 GOSR2O14653 212 aa9.57□□□□□ -0.88
USE1-209ENST00000601592 PRAF2O60831 178 aa9.57□□□□□ -0.88
USE1-209ENST00000601592 CCNKO75909 580 aa9.57□□□□□ -0.88
USE1-209ENST00000601592 CRYBB3P26998 211 aa9.57□□□□□ -0.88
USE1-209ENST00000601592 BCAP31P51572 246 aa9.57□□□□□ -0.88
USE1-209ENST00000601592 PAX9P55771 341 aa9.57□□□□□ -0.88
USE1-209ENST00000601592 USF2Q15853 346 aaPredicted RBP9.57□□□□□ -0.88
USE1-209ENST00000601592 LILRB2Q8N423 598 aa9.57□□□□□ -0.88
USE1-209ENST00000601592 STXBP6Q8NFX7 210 aa9.57□□□□□ -0.88
USE1-209ENST00000601592 RNF125Q96EQ8 232 aa9.57□□□□□ -0.88
USE1-209ENST00000601592 ZMAT4Q9H898 229 aa9.57□□□□□ -0.88
USE1-209ENST00000601592 RABAC1Q9UI14 185 aa9.57□□□□□ -0.88
USE1-209ENST00000601592 IGKV1D-37A0A075B6S9 117 aa9.56□□□□□ -0.88
USE1-209ENST00000601592 RBMY1BA6NDE4 496 aaKnown RBP9.56□□□□□ -0.88
USE1-209ENST00000601592 RBMY1EA6NEQ0 496 aaKnown RBP9.56□□□□□ -0.88
USE1-209ENST00000601592 SNRPGP15A8MWD9 76 aa9.56□□□□□ -0.88
USE1-209ENST00000601592 PRSS46E5RG02 174 aa9.56□□□□□ -0.88
USE1-209ENST00000601592 TSC22D2O75157 780 aa9.56□□□□□ -0.88
USE1-209ENST00000601592 CD5P06127 495 aa9.56□□□□□ -0.88
USE1-209ENST00000601592 RBMY1DP0C7P1 496 aaKnown RBP9.56□□□□□ -0.88
USE1-209ENST00000601592 FAM90A2PQ658T7 463 aa9.56□□□□□ -0.88
USE1-209ENST00000601592 OR10P1Q8NGE3 313 aa9.56□□□□□ -0.88
USE1-209ENST00000601592 PPP1R14BQ96C90 147 aa9.56□□□□□ -0.88
USE1-209ENST00000601592 TRGV9Q99603 122 aa9.56□□□□□ -0.88
USE1-209ENST00000601592 IGKV1OR2-108A0A075B7D4 117 aa9.55□□□□□ -0.88
USE1-209ENST00000601592 C7orf66A4D0T2 115 aa9.55□□□□□ -0.88
USE1-209ENST00000601592 SSNA1O43805 119 aa9.55□□□□□ -0.88
USE1-209ENST00000601592 SIX6O95475 246 aa9.55□□□□□ -0.88
USE1-209ENST00000601592 PVALBP20472 110 aaPredicted RBP9.55□□□□□ -0.88
USE1-209ENST00000601592 EIF2B2P49770 351 aaKnown RBP9.55□□□□□ -0.88
USE1-209ENST00000601592 CAV2P51636 162 aa9.55□□□□□ -0.88
USE1-209ENST00000601592 TAS2R30P59541 319 aa9.55□□□□□ -0.88
USE1-209ENST00000601592 RAB32Q13637 225 aa9.55□□□□□ -0.88
USE1-209ENST00000601592 HAGHQ16775 308 aa9.55□□□□□ -0.88
USE1-209ENST00000601592 ODF3L2Q3SX64 289 aa9.55□□□□□ -0.88
USE1-209ENST00000601592 TMEM14EPQ6UXP3 125 aa9.55□□□□□ -0.88
USE1-209ENST00000601592 THAP8Q8NA92 274 aa9.55□□□□□ -0.88
USE1-209ENST00000601592 RCHY1Q96PM5 261 aa9.55□□□□□ -0.88
USE1-209ENST00000601592 MARVELD1Q9BSK0 173 aa9.55□□□□□ -0.88
USE1-209ENST00000601592 MS4A6AQ9H2W1 248 aa9.55□□□□□ -0.88
USE1-209ENST00000601592 MGAT4CQ9UBM8 478 aa9.55□□□□□ -0.88
USE1-209ENST00000601592 PMS2P5A8MQ11 134 aa9.54□□□□□ -0.88
USE1-209ENST00000601592 APRG1Q8IVJ8 170 aa9.54□□□□□ -0.88
USE1-209ENST00000601592 PFDN2Q9UHV9 154 aa9.54□□□□□ -0.88
USE1-209ENST00000601592 LOC102724200A0A096LPH7 203 aaPredicted RBP9.53□□□□□ -0.88
USE1-209ENST00000601592 HELTA6NFD8 242 aa9.53□□□□□ -0.88
USE1-209ENST00000601592 GATA2P23769 480 aaPredicted RBP9.53□□□□□ -0.88
USE1-209ENST00000601592 NUP62P37198 522 aaPredicted RBP9.53□□□□□ -0.88
USE1-209ENST00000601592 DLK1P80370 383 aa9.53□□□□□ -0.88
USE1-209ENST00000601592 LRRC37A5PQ49AS3 106 aa9.53□□□□□ -0.88
USE1-209ENST00000601592 C16orf54Q6UWD8 224 aa9.53□□□□□ -0.88
USE1-209ENST00000601592 TMEM144Q7Z5S9 345 aa9.53□□□□□ -0.88
USE1-209ENST00000601592 BPIFCQ8NFQ6 507 aa9.53□□□□□ -0.88
USE1-209ENST00000601592 GLMPQ8WWB7 406 aa9.53□□□□□ -0.88
USE1-209ENST00000601592 CITED4Q96RK1 184 aa9.53□□□□□ -0.88
USE1-209ENST00000601592 SPATA25Q9BR10 227 aa9.53□□□□□ -0.88
USE1-209ENST00000601592 TM2D3Q9BRN9 247 aa9.53□□□□□ -0.88
USE1-209ENST00000601592 GGTLC1Q9BX51 225 aa9.53□□□□□ -0.88
USE1-209ENST00000601592 MAP6D1Q9H9H5 199 aa9.53□□□□□ -0.88
USE1-209ENST00000601592 RETNQ9HD89 108 aa9.53□□□□□ -0.88
USE1-209ENST00000601592 U3KQE9 123 aa9.53□□□□□ -0.88
USE1-209ENST00000601592 FAM24AA6NFZ4 105 aa9.52□□□□□ -0.89
USE1-209ENST00000601592 CST7O76096 145 aa9.52□□□□□ -0.89
USE1-209ENST00000601592 RPL35AP18077 110 aaKnown RBP9.52□□□□□ -0.89
USE1-209ENST00000601592 ORM2P19652 201 aa9.52□□□□□ -0.89
USE1-209ENST00000601592 CMC4P56277 68 aaPredicted RBP9.52□□□□□ -0.89
USE1-209ENST00000601592 SLC38A11Q08AI6 406 aa9.52□□□□□ -0.89
USE1-209ENST00000601592 ARL16Q0P5N6 197 aa9.52□□□□□ -0.89
USE1-209ENST00000601592 ZNF124Q15973 351 aa9.52□□□□□ -0.89
USE1-209ENST00000601592 SIGLEC15Q6ZMC9 328 aa9.52□□□□□ -0.89
USE1-209ENST00000601592 CYP2G1PQ6ZSU1 146 aa9.52□□□□□ -0.89
USE1-209ENST00000601592 TMEM217Q8N7C4 229 aa9.52□□□□□ -0.89
USE1-209ENST00000601592 DOK5Q9P104 306 aa9.52□□□□□ -0.89
USE1-209ENST00000601592 AGRNO00468 2067 aa9.51□□□□□ -0.89
USE1-209ENST00000601592 BUB3O43684 328 aa9.51□□□□□ -0.89
USE1-209ENST00000601592 PTTG1O95997 202 aa9.51□□□□□ -0.89
USE1-209ENST00000601592 CFDP00746 253 aaPredicted RBP9.51□□□□□ -0.89
USE1-209ENST00000601592 ZNF688P0C7X2 276 aa9.51□□□□□ -0.89
USE1-209ENST00000601592 AP2S1P53680 142 aaPredicted RBP9.51□□□□□ -0.89
USE1-209ENST00000601592 DEFB131AP59861 70 aa9.51□□□□□ -0.89
USE1-209ENST00000601592 LEMD1Q68G75 181 aa9.51□□□□□ -0.89
USE1-209ENST00000601592 LINC00322Q6ZN03 302 aaPredicted RBP9.51□□□□□ -0.89
USE1-209ENST00000601592 STX12Q86Y82 276 aa9.51□□□□□ -0.89
USE1-209ENST00000601592 FAM24BQ8N5W8 94 aa9.51□□□□□ -0.89
USE1-209ENST00000601592 OR1B1Q8NGR6 318 aa9.51□□□□□ -0.89
USE1-209ENST00000601592 WWC2-AS2Q96NR7 200 aa9.51□□□□□ -0.89
USE1-209ENST00000601592 FAM110AQ9BQ89 295 aa9.51□□□□□ -0.89
USE1-209ENST00000601592 NPVFQ9HCQ7 196 aa9.51□□□□□ -0.89
USE1-209ENST00000601592 HUWE1Q7Z6Z7 4374 aaKnown RBP9.5□□□□□ -0.89
USE1-209ENST00000601592 TRAV2A0A0B4J234 112 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms