RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 RETNQ9HD89 108 aa11.68□□□□□ -0.54
RPS28-203ENST00000600659 PSENENQ9NZ42 101 aa11.68□□□□□ -0.54
RPS28-203ENST00000600659 PAIP2BQ9ULR5 123 aaKnown RBP11.68□□□□□ -0.54
RPS28-203ENST00000600659 STRAPQ9Y3F4 350 aaKnown RBP11.68□□□□□ -0.54
RPS28-203ENST00000600659 RD3LP0DJH9 198 aa11.67□□□□□ -0.54
RPS28-203ENST00000600659 P2RY1P47900 373 aa11.67□□□□□ -0.54
RPS28-203ENST00000600659 TFPI2P48307 235 aa11.67□□□□□ -0.54
RPS28-203ENST00000600659 ZNF124Q15973 351 aa11.67□□□□□ -0.54
RPS28-203ENST00000600659 GBGT1Q8N5D6 347 aa11.67□□□□□ -0.54
RPS28-203ENST00000600659 OR51G1Q8NGK1 321 aa11.67□□□□□ -0.54
RPS28-203ENST00000600659 ENKURQ8TC29 256 aa11.67□□□□□ -0.54
RPS28-203ENST00000600659 RNF125Q96EQ8 232 aa11.67□□□□□ -0.54
RPS28-203ENST00000600659 TRGV9Q99603 122 aa11.67□□□□□ -0.54
RPS28-203ENST00000600659 MS4A6AQ9H2W1 248 aa11.67□□□□□ -0.54
RPS28-203ENST00000600659 GSKIPQ9P0R6 139 aa11.67□□□□□ -0.54
RPS28-203ENST00000600659 CSMD3Q7Z407 3707 aa11.66□□□□□ -0.54
RPS28-203ENST00000600659 C7orf66A4D0T2 115 aa11.66□□□□□ -0.54
RPS28-203ENST00000600659 ZFP92A6NM28 416 aa11.66□□□□□ -0.54
RPS28-203ENST00000600659 K7EPK0 472 aa11.66□□□□□ -0.54
RPS28-203ENST00000600659 SCGB1D2O95969 90 aa11.66□□□□□ -0.54
RPS28-203ENST00000600659 CD5P06127 495 aa11.66□□□□□ -0.54
RPS28-203ENST00000600659 HNRNPCP07910 306 aaKnown RBP eCLIP11.66□□□□□ -0.54
RPS28-203ENST00000600659 BMI1P35226 326 aa11.66□□□□□ -0.54
RPS28-203ENST00000600659 TAS2R30P59541 319 aa11.66□□□□□ -0.54
RPS28-203ENST00000600659 RPP30P78346 268 aaKnown RBP11.66□□□□□ -0.54
RPS28-203ENST00000600659 C16orf54Q6UWD8 224 aa11.66□□□□□ -0.54
RPS28-203ENST00000600659 TMEM182Q6ZP80 229 aaPredicted RBP11.66□□□□□ -0.54
RPS28-203ENST00000600659 RAB40CQ96S21 281 aa11.66□□□□□ -0.54
RPS28-203ENST00000600659 SPATA25Q9BR10 227 aa11.66□□□□□ -0.54
RPS28-203ENST00000600659 MAP6D1Q9H9H5 199 aa11.66□□□□□ -0.54
RPS28-203ENST00000600659 TRAV2A0A0B4J234 112 aa11.65□□□□□ -0.54
RPS28-203ENST00000600659 A0A1W2PS18 150 aa11.65□□□□□ -0.54
RPS28-203ENST00000600659 BUB3O43684 328 aa11.65□□□□□ -0.54
RPS28-203ENST00000600659 TSC22D2O75157 780 aa11.65□□□□□ -0.54
RPS28-203ENST00000600659 ARL16Q0P5N6 197 aa11.65□□□□□ -0.54
RPS28-203ENST00000600659 APRG1Q8IVJ8 170 aa11.65□□□□□ -0.54
RPS28-203ENST00000600659 DCANP1Q8TF63 244 aa11.65□□□□□ -0.54
RPS28-203ENST00000600659 MARVELD1Q9BSK0 173 aa11.65□□□□□ -0.54
RPS28-203ENST00000600659 TMEM231Q9H6L2 316 aa11.65□□□□□ -0.54
RPS28-203ENST00000600659 ZMAT4Q9H898 229 aa11.65□□□□□ -0.54
RPS28-203ENST00000600659 K7EQG2 157 aa11.64□□□□□ -0.55
RPS28-203ENST00000600659 METTL15P1P0C7V9 234 aa11.64□□□□□ -0.55
RPS28-203ENST00000600659 C2orf50Q96LR7 162 aa11.64□□□□□ -0.55
RPS28-203ENST00000600659 GGTLC1Q9BX51 225 aa11.64□□□□□ -0.55
RPS28-203ENST00000600659 EDA2RQ9HAV5 297 aa11.64□□□□□ -0.55
RPS28-203ENST00000600659 RABAC1Q9UI14 185 aa11.64□□□□□ -0.55
RPS28-203ENST00000600659 LOC102724200A0A096LPH7 203 aaPredicted RBP11.63□□□□□ -0.55
RPS28-203ENST00000600659 FAM25EA8MYX2 175 aa11.63□□□□□ -0.55
RPS28-203ENST00000600659 INMT-MINDY4F8WBC2 141 aa11.63□□□□□ -0.55
RPS28-203ENST00000600659 GATA2P23769 480 aaPredicted RBP11.63□□□□□ -0.55
RPS28-203ENST00000600659 OR2F1Q13607 317 aa11.63□□□□□ -0.55
RPS28-203ENST00000600659 OR8G2PQ6IF36 304 aa11.63□□□□□ -0.55
RPS28-203ENST00000600659 TMEM144Q7Z5S9 345 aa11.63□□□□□ -0.55
RPS28-203ENST00000600659 WFDC3Q8IUB2 231 aa11.63□□□□□ -0.55
RPS28-203ENST00000600659 C5orf51A6NDU8 294 aa11.62□□□□□ -0.55
RPS28-203ENST00000600659 SNRPGP15A8MWD9 76 aa11.62□□□□□ -0.55
RPS28-203ENST00000600659 EIF2B2P49770 351 aaKnown RBP11.62□□□□□ -0.55
RPS28-203ENST00000600659 DLK1P80370 383 aa11.62□□□□□ -0.55
RPS28-203ENST00000600659 RAB32Q13637 225 aa11.62□□□□□ -0.55
RPS28-203ENST00000600659 LSM5Q9Y4Y9 91 aaKnown RBP11.62□□□□□ -0.55
RPS28-203ENST00000600659 FNDC10F2Z333 226 aa11.61□□□□□ -0.55
RPS28-203ENST00000600659 LYZP61626 148 aa11.61□□□□□ -0.55
RPS28-203ENST00000600659 RRAS2P62070 204 aaPredicted RBP11.61□□□□□ -0.55
RPS28-203ENST00000600659 PAFAH1B2P68402 229 aa11.61□□□□□ -0.55
RPS28-203ENST00000600659 AKR1C1Q04828 323 aa11.61□□□□□ -0.55
RPS28-203ENST00000600659 GSG1LQ6UXU4 331 aa11.61□□□□□ -0.55
RPS28-203ENST00000600659 STXBP6Q8NFX7 210 aa11.61□□□□□ -0.55
RPS28-203ENST00000600659 GRAMD2BQ96HH9 432 aa11.61□□□□□ -0.55
RPS28-203ENST00000600659 PBDC1Q9BVG4 233 aa11.61□□□□□ -0.55
RPS28-203ENST00000600659 DYNC2H1Q8NCM8 4307 aaKnown RBP11.61□□□□□ -0.55
RPS28-203ENST00000600659 PRAF2O60831 178 aa11.6□□□□□ -0.55
RPS28-203ENST00000600659 SIX6O95475 246 aa11.6□□□□□ -0.55
RPS28-203ENST00000600659 DEFB131AP59861 70 aa11.6□□□□□ -0.55
RPS28-203ENST00000600659 RPL11P62913 178 aaKnown RBP11.6□□□□□ -0.55
RPS28-203ENST00000600659 NARS2Q96I59 477 aaKnown RBP11.6□□□□□ -0.55
RPS28-203ENST00000600659 C17orf77Q96MU5 243 aa11.6□□□□□ -0.55
RPS28-203ENST00000600659 SACSQ9NZJ4 4579 aa11.6□□□□□ -0.55
RPS28-203ENST00000600659 HELTA6NFD8 242 aa11.6□□□□□ -0.55
RPS28-203ENST00000600659 DNASE2O00115 360 aaPredicted RBP11.6□□□□□ -0.55
RPS28-203ENST00000600659 DEFA1P59665 94 aa11.6□□□□□ -0.55
RPS28-203ENST00000600659 DEFA3P59666 94 aa11.6□□□□□ -0.55
RPS28-203ENST00000600659 LEMD1Q68G75 181 aa11.6□□□□□ -0.55
RPS28-203ENST00000600659 SIGLEC15Q6ZMC9 328 aa11.6□□□□□ -0.55
RPS28-203ENST00000600659 CYP2G1PQ6ZSU1 146 aa11.6□□□□□ -0.55
RPS28-203ENST00000600659 OR10P1Q8NGE3 313 aa11.6□□□□□ -0.55
RPS28-203ENST00000600659 OVOL2Q9BRP0 275 aa11.6□□□□□ -0.55
RPS28-203ENST00000600659 GPN1Q9HCN4 374 aaPredicted RBP11.6□□□□□ -0.55
RPS28-203ENST00000600659 KIR2DL5BA0A0G2JN68 375 aa11.59□□□□□ -0.55
RPS28-203ENST00000600659 KIR2DL5BA0A0G2JPC4 375 aa11.59□□□□□ -0.55
RPS28-203ENST00000600659 IGSF23A1L1A6 192 aa11.59□□□□□ -0.55
RPS28-203ENST00000600659 SMCO3A2RU48 225 aa11.59□□□□□ -0.55
RPS28-203ENST00000600659 FAM24AA6NFZ4 105 aa11.59□□□□□ -0.55
RPS28-203ENST00000600659 SOCS3O14543 225 aa11.59□□□□□ -0.55
RPS28-203ENST00000600659 GOSR2O14653 212 aa11.59□□□□□ -0.55
RPS28-203ENST00000600659 FABP1P07148 127 aa11.59□□□□□ -0.55
RPS28-203ENST00000600659 ZNF688P0C7X2 276 aa11.59□□□□□ -0.55
RPS28-203ENST00000600659 RPL35AP18077 110 aaKnown RBP11.59□□□□□ -0.55
RPS28-203ENST00000600659 KIR2DL5AQ8N109 375 aa11.59□□□□□ -0.55
RPS28-203ENST00000600659 KIR2DL5BQ8NHK3 375 aa11.59□□□□□ -0.55
RPS28-203ENST00000600659 H0YIZ8 118 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms