RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 PPP1R1AQ13522 171 aa11.51□□□□□ -0.57
IRF3-226ENST00000600453 GAMTQ14353 236 aa11.51□□□□□ -0.57
IRF3-226ENST00000600453 MORN3Q6PF18 240 aaPredicted RBP11.51□□□□□ -0.57
IRF3-226ENST00000600453 C7orf50Q9BRJ6 194 aaKnown RBP11.51□□□□□ -0.57
IRF3-226ENST00000600453 CCDC32Q9BV29 185 aa11.51□□□□□ -0.57
IRF3-226ENST00000600453 CXorf65A6NEN9 183 aa11.5□□□□□ -0.57
IRF3-226ENST00000600453 NUPR2A6NF83 97 aa11.5□□□□□ -0.57
IRF3-226ENST00000600453 SNRPGP15A8MWD9 76 aa11.5□□□□□ -0.57
IRF3-226ENST00000600453 BUB3O43684 328 aa11.5□□□□□ -0.57
IRF3-226ENST00000600453 SYNGR2O43760 224 aa11.5□□□□□ -0.57
IRF3-226ENST00000600453 NDUFB6O95139 128 aa11.5□□□□□ -0.57
IRF3-226ENST00000600453 CFDP00746 253 aaPredicted RBP11.5□□□□□ -0.57
IRF3-226ENST00000600453 HOXB5P09067 269 aa11.5□□□□□ -0.57
IRF3-226ENST00000600453 SNRPD3P62318 126 aaKnown RBP11.5□□□□□ -0.57
IRF3-226ENST00000600453 USF2Q15853 346 aaPredicted RBP11.5□□□□□ -0.57
IRF3-226ENST00000600453 LEMD1Q68G75 181 aa11.5□□□□□ -0.57
IRF3-226ENST00000600453 OR8G2PQ6IF36 304 aa11.5□□□□□ -0.57
IRF3-226ENST00000600453 COQ8AQ8NI60 647 aa11.5□□□□□ -0.57
IRF3-226ENST00000600453 DCANP1Q8TF63 244 aa11.5□□□□□ -0.57
IRF3-226ENST00000600453 GLMPQ8WWB7 406 aa11.5□□□□□ -0.57
IRF3-226ENST00000600453 CA1P00915 261 aaPredicted RBP11.49□□□□□ -0.57
IRF3-226ENST00000600453 IFNA21P01568 189 aa11.49□□□□□ -0.57
IRF3-226ENST00000600453 SPP1P10451 314 aa11.49□□□□□ -0.57
IRF3-226ENST00000600453 S100A7P31151 101 aa11.49□□□□□ -0.57
IRF3-226ENST00000600453 BAK1Q16611 211 aa11.49□□□□□ -0.57
IRF3-226ENST00000600453 OR11H2Q8NH07 326 aa11.49□□□□□ -0.57
IRF3-226ENST00000600453 RNF125Q96EQ8 232 aa11.49□□□□□ -0.57
IRF3-226ENST00000600453 FBXL17Q9UF56 701 aa11.49□□□□□ -0.57
IRF3-226ENST00000600453 PAIP2BQ9ULR5 123 aaKnown RBP11.49□□□□□ -0.57
IRF3-226ENST00000600453 KLK5Q9Y337 293 aaPredicted RBP11.49□□□□□ -0.57
IRF3-226ENST00000600453 C9orf170A2RU37 121 aa11.48□□□□□ -0.57
IRF3-226ENST00000600453 ZNF688P0C7X2 276 aa11.48□□□□□ -0.57
IRF3-226ENST00000600453 IAPPP10997 89 aa11.48□□□□□ -0.57
IRF3-226ENST00000600453 GGNBP1Q5YKI7 109 aa11.48□□□□□ -0.57
IRF3-226ENST00000600453 SIGLEC15Q6ZMC9 328 aa11.48□□□□□ -0.57
IRF3-226ENST00000600453 FAM24BQ8N5W8 94 aa11.48□□□□□ -0.57
IRF3-226ENST00000600453 TRGV9Q99603 122 aa11.48□□□□□ -0.57
IRF3-226ENST00000600453 PBDC1Q9BVG4 233 aa11.48□□□□□ -0.57
IRF3-226ENST00000600453 NRN1Q9NPD7 142 aa11.48□□□□□ -0.57
IRF3-226ENST00000600453 CSMD3Q7Z407 3707 aa11.48□□□□□ -0.57
IRF3-226ENST00000600453 WRBO00258 174 aa11.47□□□□□ -0.57
IRF3-226ENST00000600453 NUTF2P61970 127 aaKnown RBP11.47□□□□□ -0.57
IRF3-226ENST00000600453 C1orf194Q5T5A4 169 aa11.47□□□□□ -0.57
IRF3-226ENST00000600453 TRPT1Q86TN4 253 aaKnown RBP11.47□□□□□ -0.57
IRF3-226ENST00000600453 MFFQ9GZY8 342 aa11.47□□□□□ -0.57
IRF3-226ENST00000600453 RYR3Q15413 4870 aa11.46□□□□□ -0.57
IRF3-226ENST00000600453 OR4E1P0C645 316 aa11.46□□□□□ -0.57
IRF3-226ENST00000600453 ID1P41134 155 aa11.46□□□□□ -0.57
IRF3-226ENST00000600453 ID3Q02535 119 aa11.46□□□□□ -0.57
IRF3-226ENST00000600453 PMS2P11Q13670 270 aa11.46□□□□□ -0.57
IRF3-226ENST00000600453 CEMP1Q6PRD7 247 aaPredicted RBP11.46□□□□□ -0.57
IRF3-226ENST00000600453 RAB40CQ96S21 281 aa11.46□□□□□ -0.57
IRF3-226ENST00000600453 MAGT1Q9H0U3 335 aa11.46□□□□□ -0.57
IRF3-226ENST00000600453 STRAPQ9Y3F4 350 aaKnown RBP11.46□□□□□ -0.57
IRF3-226ENST00000600453 AGRNO00468 2067 aa11.46□□□□□ -0.57
IRF3-226ENST00000600453 IGKV1D-37A0A075B6S9 117 aa11.45□□□□□ -0.58
IRF3-226ENST00000600453 LINC00854A0A1B0GVQ3 168 aa11.45□□□□□ -0.58
IRF3-226ENST00000600453 DEFA1P59665 94 aa11.45□□□□□ -0.58
IRF3-226ENST00000600453 DEFA3P59666 94 aa11.45□□□□□ -0.58
IRF3-226ENST00000600453 ZNF90Q03938 601 aa11.45□□□□□ -0.58
IRF3-226ENST00000600453 C4orf46Q504U0 113 aa11.45□□□□□ -0.58
IRF3-226ENST00000600453 PSMG4Q5JS54 123 aa11.45□□□□□ -0.58
IRF3-226ENST00000600453 ACTL10Q5JWF8 245 aa11.45□□□□□ -0.58
IRF3-226ENST00000600453 SPANXN5Q5MJ07 72 aa11.45□□□□□ -0.58
IRF3-226ENST00000600453 SAMD13Q5VXD3 122 aa11.45□□□□□ -0.58
IRF3-226ENST00000600453 THAP8Q8NA92 274 aa11.45□□□□□ -0.58
IRF3-226ENST00000600453 PPP1R14BQ96C90 147 aa11.45□□□□□ -0.58
IRF3-226ENST00000600453 C1QTNF4Q9BXJ3 329 aa11.45□□□□□ -0.58
IRF3-226ENST00000600453 C11orf68Q9H3H3 251 aaKnown RBP11.45□□□□□ -0.58
IRF3-226ENST00000600453 UPK1BO75841 260 aa11.44□□□□□ -0.58
IRF3-226ENST00000600453 NKX2-1P43699 371 aaPredicted RBP11.44□□□□□ -0.58
IRF3-226ENST00000600453 LYZP61626 148 aa11.44□□□□□ -0.58
IRF3-226ENST00000600453 C11orf45Q8TAV5 145 aa11.44□□□□□ -0.58
IRF3-226ENST00000600453 SLC45A2Q9UMX9 530 aa11.44□□□□□ -0.58
IRF3-226ENST00000600453 KNCNA6PVL3 124 aa11.43□□□□□ -0.58
IRF3-226ENST00000600453 IL7P13232 177 aa11.43□□□□□ -0.58
IRF3-226ENST00000600453 EWSR1Q01844 656 aaKnown RBP eCLIP11.43□□□□□ -0.58
IRF3-226ENST00000600453 OR8I2Q8N0Y5 310 aa11.43□□□□□ -0.58
IRF3-226ENST00000600453 BPIFCQ8NFQ6 507 aa11.43□□□□□ -0.58
IRF3-226ENST00000600453 SMIM8Q96KF7 97 aa11.43□□□□□ -0.58
IRF3-226ENST00000600453 SDHCQ99643 169 aaPredicted RBP11.43□□□□□ -0.58
IRF3-226ENST00000600453 PSENENQ9NZ42 101 aa11.43□□□□□ -0.58
IRF3-226ENST00000600453 FLVCR2Q9UPI3 526 aa11.43□□□□□ -0.58
IRF3-226ENST00000600453 DYNC2H1Q8NCM8 4307 aaKnown RBP11.43□□□□□ -0.58
IRF3-226ENST00000600453 ADAP1O75689 374 aa11.42□□□□□ -0.58
IRF3-226ENST00000600453 MIFP14174 115 aa11.42□□□□□ -0.58
IRF3-226ENST00000600453 OR2F1Q13607 317 aa11.42□□□□□ -0.58
IRF3-226ENST00000600453 RGS21Q2M5E4 152 aa11.42□□□□□ -0.58
IRF3-226ENST00000600453 S100A7AQ86SG5 101 aa11.42□□□□□ -0.58
IRF3-226ENST00000600453 PHLDA1Q8WV24 401 aaPredicted RBP11.42□□□□□ -0.58
IRF3-226ENST00000600453 STARD9Q9P2P6 4700 aa11.41□□□□□ -0.58
IRF3-226ENST00000600453 PRSS46E5RG02 174 aa11.41□□□□□ -0.58
IRF3-226ENST00000600453 ANXA7P20073 488 aaKnown RBP11.41□□□□□ -0.58
IRF3-226ENST00000600453 MEOX2P50222 304 aa11.41□□□□□ -0.58
IRF3-226ENST00000600453 POLR2GP62487 172 aaKnown RBP eCLIP11.41□□□□□ -0.58
IRF3-226ENST00000600453 AKR1C1Q04828 323 aa11.41□□□□□ -0.58
IRF3-226ENST00000600453 SPATA31B1PQ5VZV4 182 aa11.41□□□□□ -0.58
IRF3-226ENST00000600453 TMEM144Q7Z5S9 345 aa11.41□□□□□ -0.58
IRF3-226ENST00000600453 OR4D5Q8NGN0 318 aa11.41□□□□□ -0.58
IRF3-226ENST00000600453 GPR82Q96P67 336 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms