RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 FAM90A26D6RGX4 464 aa11.53□□□□□ -0.56
VRK3-221ENST00000600284 LY6G6CO95867 125 aa11.53□□□□□ -0.56
VRK3-221ENST00000600284 PSG1P11464 419 aa11.53□□□□□ -0.56
VRK3-221ENST00000600284 TMED4Q7Z7H5 227 aa11.53□□□□□ -0.56
VRK3-221ENST00000600284 OR51G1Q8NGK1 321 aa11.53□□□□□ -0.56
VRK3-221ENST00000600284 GIG44P09565 113 aaPredicted RBP11.52□□□□□ -0.57
VRK3-221ENST00000600284 SNRPD3P62318 126 aaKnown RBP11.52□□□□□ -0.57
VRK3-221ENST00000600284 GAMTQ14353 236 aa11.52□□□□□ -0.57
VRK3-221ENST00000600284 ZNF79Q15937 498 aa11.52□□□□□ -0.57
VRK3-221ENST00000600284 OR8G2PQ6IF36 304 aa11.52□□□□□ -0.57
VRK3-221ENST00000600284 SIGLEC15Q6ZMC9 328 aa11.52□□□□□ -0.57
VRK3-221ENST00000600284 CCDC190Q86UF4 302 aa11.52□□□□□ -0.57
VRK3-221ENST00000600284 RNF125Q96EQ8 232 aa11.52□□□□□ -0.57
VRK3-221ENST00000600284 NRN1Q9NPD7 142 aa11.52□□□□□ -0.57
VRK3-221ENST00000600284 TMED3Q9Y3Q3 217 aa11.52□□□□□ -0.57
VRK3-221ENST00000600284 CCDC160A6NGH7 325 aa11.51□□□□□ -0.57
VRK3-221ENST00000600284 ZFP92A6NM28 416 aa11.51□□□□□ -0.57
VRK3-221ENST00000600284 KNCNA6PVL3 124 aa11.51□□□□□ -0.57
VRK3-221ENST00000600284 ZNF701M0R085 212 aaPredicted RBP11.51□□□□□ -0.57
VRK3-221ENST00000600284 MED6O75586 246 aa11.51□□□□□ -0.57
VRK3-221ENST00000600284 FABP1P07148 127 aa11.51□□□□□ -0.57
VRK3-221ENST00000600284 VAMP1P23763 118 aa11.51□□□□□ -0.57
VRK3-221ENST00000600284 RAB11AP62491 216 aa11.51□□□□□ -0.57
VRK3-221ENST00000600284 ACTL10Q5JWF8 245 aa11.51□□□□□ -0.57
VRK3-221ENST00000600284 SLC35E1Q96K37 410 aa11.51□□□□□ -0.57
VRK3-221ENST00000600284 RAB40CQ96S21 281 aa11.51□□□□□ -0.57
VRK3-221ENST00000600284 HRH4Q9H3N8 390 aa11.51□□□□□ -0.57
VRK3-221ENST00000600284 ZNF705EA8MWA4 302 aaPredicted RBP11.5□□□□□ -0.57
VRK3-221ENST00000600284 SFT2D2O95562 160 aa11.5□□□□□ -0.57
VRK3-221ENST00000600284 MIFP14174 115 aa11.5□□□□□ -0.57
VRK3-221ENST00000600284 NANOS2P60321 138 aaKnown RBP11.5□□□□□ -0.57
VRK3-221ENST00000600284 NUTF2P61970 127 aaKnown RBP11.5□□□□□ -0.57
VRK3-221ENST00000600284 RPP30P78346 268 aaKnown RBP11.5□□□□□ -0.57
VRK3-221ENST00000600284 PSMG4Q5JS54 123 aa11.5□□□□□ -0.57
VRK3-221ENST00000600284 Q8NAQ8 132 aa11.5□□□□□ -0.57
VRK3-221ENST00000600284 CIB3Q96Q77 187 aaPredicted RBP11.5□□□□□ -0.57
VRK3-221ENST00000600284 IGKV1D-37A0A075B6S9 117 aa11.49□□□□□ -0.57
VRK3-221ENST00000600284 SNRPGP15A8MWD9 76 aa11.49□□□□□ -0.57
VRK3-221ENST00000600284 TCTAP57738 103 aa11.49□□□□□ -0.57
VRK3-221ENST00000600284 UBE2MP61081 183 aaKnown RBP11.49□□□□□ -0.57
VRK3-221ENST00000600284 SPANXN2Q5MJ10 180 aa11.49□□□□□ -0.57
VRK3-221ENST00000600284 C1orf194Q5T5A4 169 aa11.49□□□□□ -0.57
VRK3-221ENST00000600284 LGALS9CQ6DKI2 356 aa11.49□□□□□ -0.57
VRK3-221ENST00000600284 CENPSQ8N2Z9 138 aa11.49□□□□□ -0.57
VRK3-221ENST00000600284 C1QTNF4Q9BXJ3 329 aa11.49□□□□□ -0.57
VRK3-221ENST00000600284 RBM38Q9H0Z9 239 aaKnown RBP11.49□□□□□ -0.57
VRK3-221ENST00000600284 FBXL17Q9UF56 701 aa11.49□□□□□ -0.57
VRK3-221ENST00000600284 CFDP00746 253 aaPredicted RBP11.48□□□□□ -0.57
VRK3-221ENST00000600284 C4BPBP20851 252 aa11.48□□□□□ -0.57
VRK3-221ENST00000600284 NKX2-1P43699 371 aaPredicted RBP11.48□□□□□ -0.57
VRK3-221ENST00000600284 ZNF90Q03938 601 aa11.48□□□□□ -0.57
VRK3-221ENST00000600284 PPP1R1AQ13522 171 aa11.48□□□□□ -0.57
VRK3-221ENST00000600284 CSNK1G2-AS1Q8NCQ2 148 aa11.48□□□□□ -0.57
VRK3-221ENST00000600284 TRGV9Q99603 122 aa11.48□□□□□ -0.57
VRK3-221ENST00000600284 PBDC1Q9BVG4 233 aa11.48□□□□□ -0.57
VRK3-221ENST00000600284 AGRNO00468 2067 aa11.47□□□□□ -0.57
VRK3-221ENST00000600284 NAP1L6A6NFF2 107 aa11.47□□□□□ -0.57
VRK3-221ENST00000600284 C11orf94C9JXX5 98 aa11.47□□□□□ -0.57
VRK3-221ENST00000600284 DEFB4AO15263 64 aa11.47□□□□□ -0.57
VRK3-221ENST00000600284 SYNGR2O43760 224 aa11.47□□□□□ -0.57
VRK3-221ENST00000600284 IAPPP10997 89 aa11.47□□□□□ -0.57
VRK3-221ENST00000600284 THAP8Q8NA92 274 aa11.47□□□□□ -0.57
VRK3-221ENST00000600284 C2CD4CQ8TF44 421 aa11.47□□□□□ -0.57
VRK3-221ENST00000600284 SRRQ9GZT4 340 aa11.47□□□□□ -0.57
VRK3-221ENST00000600284 TBC1D24Q9ULP9 559 aa11.47□□□□□ -0.57
VRK3-221ENST00000600284 X6R8D5 127 aa11.47□□□□□ -0.57
VRK3-221ENST00000600284 IGHV4-28A0A0C4DH34 117 aa11.46□□□□□ -0.57
VRK3-221ENST00000600284 H3BMM0 161 aa11.46□□□□□ -0.57
VRK3-221ENST00000600284 RBMY1A1P0DJD3 496 aaKnown RBP11.46□□□□□ -0.57
VRK3-221ENST00000600284 RBMY1CP0DJD4 496 aa11.46□□□□□ -0.57
VRK3-221ENST00000600284 RBMY1FQ15415 496 aaKnown RBP11.46□□□□□ -0.57
VRK3-221ENST00000600284 GGNBP1Q5YKI7 109 aa11.46□□□□□ -0.57
VRK3-221ENST00000600284 KMT2AQ03164 3969 aa11.45□□□□□ -0.58
VRK3-221ENST00000600284 HOXB5P09067 269 aa11.45□□□□□ -0.58
VRK3-221ENST00000600284 HLA-DRB4P13762 266 aa11.45□□□□□ -0.58
VRK3-221ENST00000600284 ID1P41134 155 aa11.45□□□□□ -0.58
VRK3-221ENST00000600284 LYZP61626 148 aa11.45□□□□□ -0.58
VRK3-221ENST00000600284 SAMD13Q5VXD3 122 aa11.45□□□□□ -0.58
VRK3-221ENST00000600284 PAIP2BQ9ULR5 123 aaKnown RBP11.45□□□□□ -0.58
VRK3-221ENST00000600284 HLA-DRB4X5D2U9 266 aa11.45□□□□□ -0.58
VRK3-221ENST00000600284 IGKV1OR2-108A0A075B7D4 117 aa11.44□□□□□ -0.58
VRK3-221ENST00000600284 C9orf170A2RU37 121 aa11.44□□□□□ -0.58
VRK3-221ENST00000600284 PRSS46E5RG02 174 aa11.44□□□□□ -0.58
VRK3-221ENST00000600284 WRBO00258 174 aa11.44□□□□□ -0.58
VRK3-221ENST00000600284 NDUFB6O95139 128 aa11.44□□□□□ -0.58
VRK3-221ENST00000600284 INPP1P49441 399 aa11.44□□□□□ -0.58
VRK3-221ENST00000600284 PSMB3P49720 205 aa11.44□□□□□ -0.58
VRK3-221ENST00000600284 ID3Q02535 119 aa11.44□□□□□ -0.58
VRK3-221ENST00000600284 CLUHP3Q96NS8 147 aa11.44□□□□□ -0.58
VRK3-221ENST00000600284 MAGT1Q9H0U3 335 aa11.44□□□□□ -0.58
VRK3-221ENST00000600284 CLEC5AQ9NY25 188 aa11.44□□□□□ -0.58
VRK3-221ENST00000600284 SLC45A2Q9UMX9 530 aa11.44□□□□□ -0.58
VRK3-221ENST00000600284 S100A7P31151 101 aa11.43□□□□□ -0.58
VRK3-221ENST00000600284 OR2F1Q13607 317 aa11.43□□□□□ -0.58
VRK3-221ENST00000600284 SPATA31B1PQ5VZV4 182 aa11.43□□□□□ -0.58
VRK3-221ENST00000600284 TRIQKQ629K1 86 aa11.43□□□□□ -0.58
VRK3-221ENST00000600284 FOXI2Q6ZQN5 318 aa11.43□□□□□ -0.58
VRK3-221ENST00000600284 OR8I2Q8N0Y5 310 aa11.43□□□□□ -0.58
VRK3-221ENST00000600284 PPP1R14BQ96C90 147 aa11.43□□□□□ -0.58
VRK3-221ENST00000600284 STRAPQ9Y3F4 350 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms