RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 PIFOQ8TCI5 191 aa12.05□□□□□ -0.48
VRK3-218ENST00000600031 PRSS46E5RG02 174 aa12.04□□□□□ -0.48
VRK3-218ENST00000600031 SMAD7O15105 426 aaKnown RBP12.04□□□□□ -0.48
VRK3-218ENST00000600031 CXorf1O96002 111 aa12.04□□□□□ -0.48
VRK3-218ENST00000600031 GPX4P36969 197 aaPredicted RBP12.04□□□□□ -0.48
VRK3-218ENST00000600031 NAV3Q8IVL0 2385 aa12.04□□□□□ -0.48
VRK3-218ENST00000600031 A0A1W2PN81 502 aa12.04□□□□□ -0.48
VRK3-218ENST00000600031 INS-IGF2F8WCM5 200 aa12.04□□□□□ -0.48
VRK3-218ENST00000600031 STAG3L2P0CL84 134 aa12.04□□□□□ -0.48
VRK3-218ENST00000600031 STAG3L3P0CL85 134 aa12.04□□□□□ -0.48
VRK3-218ENST00000600031 DEFA4P12838 97 aa12.04□□□□□ -0.48
VRK3-218ENST00000600031 CHRNA7P36544 502 aa12.04□□□□□ -0.48
VRK3-218ENST00000600031 ATP5G3P48201 142 aa12.04□□□□□ -0.48
VRK3-218ENST00000600031 GGTLC1Q9BX51 225 aa12.04□□□□□ -0.48
VRK3-218ENST00000600031 NPVFQ9HCQ7 196 aa12.04□□□□□ -0.48
VRK3-218ENST00000600031 PXMP4Q9Y6I8 212 aa12.04□□□□□ -0.48
VRK3-218ENST00000600031 GCGP01275 180 aa12.03□□□□□ -0.48
VRK3-218ENST00000600031 APELAP0DMC3 54 aa12.03□□□□□ -0.48
VRK3-218ENST00000600031 RNASE2P10153 161 aaKnown RBP12.03□□□□□ -0.48
VRK3-218ENST00000600031 ERHP84090 104 aaKnown RBP12.03□□□□□ -0.48
VRK3-218ENST00000600031 GCSAMLQ5JQS6 135 aa12.03□□□□□ -0.48
VRK3-218ENST00000600031 Q8N9W7 124 aa12.03□□□□□ -0.48
VRK3-218ENST00000600031 MGST2Q99735 147 aa12.03□□□□□ -0.48
VRK3-218ENST00000600031 FUT9Q9Y231 359 aa12.03□□□□□ -0.48
VRK3-218ENST00000600031 IGLC7A0M8Q6 106 aa12.02□□□□□ -0.48
VRK3-218ENST00000600031 TEX22C9J3V5 150 aa12.02□□□□□ -0.48
VRK3-218ENST00000600031 NDUFB4O95168 129 aa12.02□□□□□ -0.48
VRK3-218ENST00000600031 REG1AP05451 166 aa12.02□□□□□ -0.48
VRK3-218ENST00000600031 UBE2G2P60604 165 aa12.02□□□□□ -0.48
VRK3-218ENST00000600031 FOXL1Q12952 345 aa12.02□□□□□ -0.48
VRK3-218ENST00000600031 BCL6BQ8N143 479 aaPredicted RBP12.02□□□□□ -0.48
VRK3-218ENST00000600031 SRSF12Q8WXF0 261 aaKnown RBP12.02□□□□□ -0.48
VRK3-218ENST00000600031 CNIH1O95406 144 aa12.02□□□□□ -0.49
VRK3-218ENST00000600031 AREGP15514 252 aa12.02□□□□□ -0.49
VRK3-218ENST00000600031 DDTP30046 118 aa12.02□□□□□ -0.49
VRK3-218ENST00000600031 C2orf83Q53S99 150 aa12.02□□□□□ -0.49
VRK3-218ENST00000600031 FAM78BQ5VT40 261 aa12.02□□□□□ -0.49
VRK3-218ENST00000600031 REC114Q7Z4M0 266 aa12.02□□□□□ -0.49
VRK3-218ENST00000600031 OR5T1Q8NG75 326 aa12.02□□□□□ -0.49
VRK3-218ENST00000600031 TMEM37Q8WXS4 190 aa12.02□□□□□ -0.49
VRK3-218ENST00000600031 TMEM18Q96B42 140 aa12.02□□□□□ -0.49
VRK3-218ENST00000600031 FLNAP21333 2647 aaKnown RBP12.02□□□□□ -0.49
VRK3-218ENST00000600031 MDFIC2A0A1B0GVS7 189 aa12.01□□□□□ -0.49
VRK3-218ENST00000600031 FSHBP01225 129 aa12.01□□□□□ -0.49
VRK3-218ENST00000600031 ARL14EPLP0DKL9 152 aa12.01□□□□□ -0.49
VRK3-218ENST00000600031 GZMBP10144 247 aa12.01□□□□□ -0.49
VRK3-218ENST00000600031 TMEM144Q7Z5S9 345 aa12.01□□□□□ -0.49
VRK3-218ENST00000600031 C22orf15Q8WYQ4 148 aa12.01□□□□□ -0.49
VRK3-218ENST00000600031 C14orf144Q96I85 54 aa12.01□□□□□ -0.49
VRK3-218ENST00000600031 C1RLQ9NZP8 487 aa12.01□□□□□ -0.49
VRK3-218ENST00000600031 LSM4Q9Y4Z0 139 aaKnown RBP12.01□□□□□ -0.49
VRK3-218ENST00000600031 CNN1P51911 297 aaKnown RBP12.01□□□□□ -0.49
VRK3-218ENST00000600031 FXYD3Q14802 87 aa12.01□□□□□ -0.49
VRK3-218ENST00000600031 MIC13Q5XKP0 118 aa12.01□□□□□ -0.49
VRK3-218ENST00000600031 TMEM219Q86XT9 240 aa12.01□□□□□ -0.49
VRK3-218ENST00000600031 SSMEM1Q8WWF3 244 aa12.01□□□□□ -0.49
VRK3-218ENST00000600031 MT-CO2P00403 227 aa12□□□□□ -0.49
VRK3-218ENST00000600031 CX3CL1P78423 397 aa12□□□□□ -0.49
VRK3-218ENST00000600031 RAB31Q13636 194 aa12□□□□□ -0.49
VRK3-218ENST00000600031 ZNF562Q6V9R5 426 aa12□□□□□ -0.49
VRK3-218ENST00000600031 C19orf35Q6ZS72 473 aa12□□□□□ -0.49
VRK3-218ENST00000600031 SFRP2Q96HF1 295 aa12□□□□□ -0.49
VRK3-218ENST00000600031 FAM103A1Q9BTL3 118 aaKnown RBP12□□□□□ -0.49
VRK3-218ENST00000600031 ZNF320A2RRD8 509 aa11.99□□□□□ -0.49
VRK3-218ENST00000600031 FNDC10F2Z333 226 aa11.99□□□□□ -0.49
VRK3-218ENST00000600031 H3BUX3 64 aa11.99□□□□□ -0.49
VRK3-218ENST00000600031 ATP5IP56385 69 aaPredicted RBP11.99□□□□□ -0.49
VRK3-218ENST00000600031 BPIFB3P59826 476 aa11.99□□□□□ -0.49
VRK3-218ENST00000600031 RPL15P61313 204 aaKnown RBP11.99□□□□□ -0.49
VRK3-218ENST00000600031 RHOBP62745 196 aa11.99□□□□□ -0.49
VRK3-218ENST00000600031 NDPQ00604 133 aa11.99□□□□□ -0.49
VRK3-218ENST00000600031 DEFB112Q30KQ8 113 aa11.99□□□□□ -0.49
VRK3-218ENST00000600031 TEPPQ6URK8 271 aa11.99□□□□□ -0.49
VRK3-218ENST00000600031 NOL4LQ96MY1 436 aaPredicted RBP11.99□□□□□ -0.49
VRK3-218ENST00000600031 RBM14Q96PK6 669 aaKnown RBP11.99□□□□□ -0.49
VRK3-218ENST00000600031 RPL29P47914 159 aaKnown RBP11.99□□□□□ -0.49
VRK3-218ENST00000600031 RASL11BQ9BPW5 248 aa11.99□□□□□ -0.49
VRK3-218ENST00000600031 SLC25A33Q9BSK2 321 aa11.99□□□□□ -0.49
VRK3-218ENST00000600031 DERL1Q9BUN8 251 aa11.99□□□□□ -0.49
VRK3-218ENST00000600031 TRAPPC1Q9Y5R8 145 aa11.99□□□□□ -0.49
VRK3-218ENST00000600031 IGHV7-81A0A0B4J1V7 117 aa11.98□□□□□ -0.49
VRK3-218ENST00000600031 GCHFRP30047 84 aa11.98□□□□□ -0.49
VRK3-218ENST00000600031 LY6EQ16553 131 aa11.98□□□□□ -0.49
VRK3-218ENST00000600031 MLANAQ16655 118 aa11.98□□□□□ -0.49
VRK3-218ENST00000600031 ARSJQ5FYB0 599 aaPredicted RBP11.98□□□□□ -0.49
VRK3-218ENST00000600031 HSPB9Q9BQS6 159 aa11.98□□□□□ -0.49
VRK3-218ENST00000600031 PRO1933Q9H354 126 aa11.98□□□□□ -0.49
VRK3-218ENST00000600031 TLN2Q9Y4G6 2542 aa11.98□□□□□ -0.49
VRK3-218ENST00000600031 TRAV9-1A0A075B6T8 112 aa11.98□□□□□ -0.49
VRK3-218ENST00000600031 SH2D7A6NKC9 451 aaPredicted RBP11.98□□□□□ -0.49
VRK3-218ENST00000600031 MFAP2P55001 183 aa11.98□□□□□ -0.49
VRK3-218ENST00000600031 MRPL41Q8IXM3 137 aaKnown RBP11.98□□□□□ -0.49
VRK3-218ENST00000600031 C5orf56Q8N8D9 126 aa11.98□□□□□ -0.49
VRK3-218ENST00000600031 ARPC1AQ92747 370 aa11.98□□□□□ -0.49
VRK3-218ENST00000600031 NOTCH2Q04721 2471 aa11.97□□□□□ -0.49
VRK3-218ENST00000600031 HLA-DRB1P01911 266 aa11.97□□□□□ -0.49
VRK3-218ENST00000600031 SUB1P53999 127 aaKnown RBP eCLIP11.97□□□□□ -0.49
VRK3-218ENST00000600031 KRTAP1-1Q07627 177 aa11.97□□□□□ -0.49
VRK3-218ENST00000600031 ZNF114Q8NC26 417 aa11.97□□□□□ -0.49
VRK3-218ENST00000600031 OR10G8Q8NGN5 311 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms