RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 SSBP1Q04837 148 aaKnown RBP15.14■□□□□ 0.01
PNKP-212ENST00000599454 SURF2Q15527 256 aaPredicted RBP15.14■□□□□ 0.01
PNKP-212ENST00000599454 TMEM170AQ8WVE7 144 aa15.14■□□□□ 0.01
PNKP-212ENST00000599454 NPIPB3Q92617 1050 aa15.14■□□□□ 0.01
PNKP-212ENST00000599454 GPR146Q96CH1 333 aa15.14■□□□□ 0.01
PNKP-212ENST00000599454 SCRT1Q9BWW7 348 aa15.14■□□□□ 0.01
PNKP-212ENST00000599454 NACAE9PAV3 2078 aa15.13■□□□□ 0.01
PNKP-212ENST00000599454 MEF2DQ14814 521 aa15.13■□□□□ 0.01
PNKP-212ENST00000599454 ACY3Q96HD9 319 aa15.13■□□□□ 0.01
PNKP-212ENST00000599454 CLUHP3Q96NS8 147 aa15.13■□□□□ 0.01
PNKP-212ENST00000599454 RTBDNQ9BSG5 229 aaPredicted RBP15.13■□□□□ 0.01
PNKP-212ENST00000599454 RFNGQ9Y644 331 aa15.13■□□□□ 0.01
PNKP-212ENST00000599454 NXPH3O95157 252 aa15.12■□□□□ 0.01
PNKP-212ENST00000599454 PSG1P11464 419 aa15.12■□□□□ 0.01
PNKP-212ENST00000599454 ZNF182P17025 639 aaPredicted RBP15.12■□□□□ 0.01
PNKP-212ENST00000599454 NMSQ5H8A3 153 aa15.12■□□□□ 0.01
PNKP-212ENST00000599454 GPR107Q5VW38 600 aa15.12■□□□□ 0.01
PNKP-212ENST00000599454 TMEM268Q5VZI3 342 aa15.12■□□□□ 0.01
PNKP-212ENST00000599454 OR8G2PQ6IF36 304 aa15.12■□□□□ 0.01
PNKP-212ENST00000599454 UBE2DNLQ8IWF7 75 aa15.12■□□□□ 0.01
PNKP-212ENST00000599454 OR51G1Q8NGK1 321 aa15.12■□□□□ 0.01
PNKP-212ENST00000599454 GABARAPH6UMI1 98 aa15.11■□□□□ 0.01
PNKP-212ENST00000599454 GABARAPO95166 117 aa15.11■□□□□ 0.01
PNKP-212ENST00000599454 ID1P41134 155 aa15.11■□□□□ 0.01
PNKP-212ENST00000599454 MRPS10P82664 201 aaKnown RBP15.11■□□□□ 0.01
PNKP-212ENST00000599454 FOXI2Q6ZQN5 318 aa15.11■□□□□ 0.01
PNKP-212ENST00000599454 RNF125Q96EQ8 232 aa15.11■□□□□ 0.01
PNKP-212ENST00000599454 SAV1Q9H4B6 383 aaPredicted RBP15.11■□□□□ 0.01
PNKP-212ENST00000599454 TMEM56-RWDD3S4R434 201 aa15.11■□□□□ 0.01
PNKP-212ENST00000599454 U3KQ87 197 aa15.11■□□□□ 0.01
PNKP-212ENST00000599454 RYR1P21817 5038 aa15.1■□□□□ 0.01
PNKP-212ENST00000599454 DISC1C4P0D8 188 aa15.1■□□□□ 0.01
PNKP-212ENST00000599454 SULT1A3P0DMM9 295 aa15.1■□□□□ 0.01
PNKP-212ENST00000599454 SULT1A4P0DMN0 295 aa15.1■□□□□ 0.01
PNKP-212ENST00000599454 EMP1P54849 157 aa15.1■□□□□ 0.01
PNKP-212ENST00000599454 GDF5OSQ5U4N7 250 aa15.1■□□□□ 0.01
PNKP-212ENST00000599454 SPATA31B1PQ5VZV4 182 aa15.1■□□□□ 0.01
PNKP-212ENST00000599454 IL22RA2Q969J5 263 aa15.1■□□□□ 0.01
PNKP-212ENST00000599454 NIPSNAP3BQ9BS92 247 aa15.1■□□□□ 0.01
PNKP-212ENST00000599454 DKK2Q9UBU2 259 aa15.1■□□□□ 0.01
PNKP-212ENST00000599454 DNAH11Q96DT5 4516 aa15.1■□□□□ 0.01
PNKP-212ENST00000599454 CRYM-AS1A6NIL9 109 aa15.09■□□□□ 0.01
PNKP-212ENST00000599454 PSMB3P49720 205 aa15.09■□□□□ 0.01
PNKP-212ENST00000599454 OXA1LQ15070 435 aa15.09■□□□□ 0.01
PNKP-212ENST00000599454 RNF212Q495C1 297 aa15.09■□□□□ 0.01
PNKP-212ENST00000599454 SOHLH1Q5JUK2 328 aa15.09■□□□□ 0.01
PNKP-212ENST00000599454 Q6ZR54 194 aa15.09■□□□□ 0.01
PNKP-212ENST00000599454 GPR132Q9UNW8 380 aa15.09■□□□□ 0.01
PNKP-212ENST00000599454 IGHV3OR16-12A0A075B7B8 117 aa15.08■□□□□ 0
PNKP-212ENST00000599454 IGKV3-20P01619 116 aa15.08■□□□□ 0
PNKP-212ENST00000599454 ATP5IP56385 69 aaPredicted RBP15.08■□□□□ 0
PNKP-212ENST00000599454 KLF9Q13886 244 aaPredicted RBP15.08■□□□□ 0
PNKP-212ENST00000599454 C1orf194Q5T5A4 169 aa15.08■□□□□ 0
PNKP-212ENST00000599454 LINC00052Q96N35 136 aa15.08■□□□□ 0
PNKP-212ENST00000599454 PBDC1Q9BVG4 233 aa15.08■□□□□ 0
PNKP-212ENST00000599454 GOLT1BQ9Y3E0 138 aa15.08■□□□□ 0
PNKP-212ENST00000599454 DYNC1H1Q14204 4646 aaKnown RBP15.07■□□□□ 0
PNKP-212ENST00000599454 FABP1P07148 127 aa15.07■□□□□ 0
PNKP-212ENST00000599454 SUPT4H1P63272 117 aaKnown RBP15.07■□□□□ 0
PNKP-212ENST00000599454 FAM222AQ5U5X8 452 aa15.07■□□□□ 0
PNKP-212ENST00000599454 SAMD13Q5VXD3 122 aa15.07■□□□□ 0
PNKP-212ENST00000599454 FAAP20Q6NZ36 180 aa15.07■□□□□ 0
PNKP-212ENST00000599454 LGI3Q8N145 548 aa15.07■□□□□ 0
PNKP-212ENST00000599454 ZNF709Q8N972 641 aa15.07■□□□□ 0
PNKP-212ENST00000599454 COQ8AQ8NI60 647 aa15.07■□□□□ 0
PNKP-212ENST00000599454 WDR12Q9GZL7 423 aaKnown RBP15.07■□□□□ 0
PNKP-212ENST00000599454 KCNIP3Q9Y2W7 256 aa15.07■□□□□ 0
PNKP-212ENST00000599454 PKD1P98161 4303 aa15.06■□□□□ 0
PNKP-212ENST00000599454 IGLV2-18A0A075B6J9 118 aa15.06■□□□□ 0
PNKP-212ENST00000599454 ZFP92A6NM28 416 aa15.06■□□□□ 0
PNKP-212ENST00000599454 AKAIN1P0CW23 69 aa15.06■□□□□ 0
PNKP-212ENST00000599454 GPX4P36969 197 aaPredicted RBP15.06■□□□□ 0
PNKP-212ENST00000599454 FXYD7P58549 80 aa15.06■□□□□ 0
PNKP-212ENST00000599454 ZNF79Q15937 498 aa15.06■□□□□ 0
PNKP-212ENST00000599454 CTF1Q16619 201 aa15.06■□□□□ 0
PNKP-212ENST00000599454 OR4B1Q8NGF8 309 aa15.06■□□□□ 0
PNKP-212ENST00000599454 PRRT1Q99946 306 aa15.06■□□□□ 0
PNKP-212ENST00000599454 HSPB7Q9UBY9 170 aa15.06■□□□□ 0
PNKP-212ENST00000599454 ISLRO14498 428 aa15.05■□□□□ -0
PNKP-212ENST00000599454 SOCS3O14543 225 aa15.05■□□□□ -0
PNKP-212ENST00000599454 HBE1P02100 147 aa15.05■□□□□ -0
PNKP-212ENST00000599454 CCR6P51684 374 aa15.05■□□□□ -0
PNKP-212ENST00000599454 PAX9P55771 341 aa15.05■□□□□ -0
PNKP-212ENST00000599454 PSG9Q00887 426 aa15.05■□□□□ -0
PNKP-212ENST00000599454 DTD1Q8TEA8 209 aa15.05■□□□□ -0
PNKP-212ENST00000599454 SMIM4Q8WVI0 70 aa15.05■□□□□ -0
PNKP-212ENST00000599454 SLC35E1Q96K37 410 aa15.05■□□□□ -0
PNKP-212ENST00000599454 DEFB1P60022 68 aa15.04■□□□□ -0
PNKP-212ENST00000599454 SMCO1Q147U7 214 aa15.04■□□□□ -0
PNKP-212ENST00000599454 EBLN2Q6P2I7 272 aa15.04■□□□□ -0
PNKP-212ENST00000599454 C7orf50Q9BRJ6 194 aaKnown RBP15.04■□□□□ -0
PNKP-212ENST00000599454 A0A0B4J2A0 478 aa15.03■□□□□ -0
PNKP-212ENST00000599454 LOC102723971A0A1B0GUV8 181 aa15.03■□□□□ -0
PNKP-212ENST00000599454 OR4C16Q8NGL9 310 aa15.03■□□□□ -0
PNKP-212ENST00000599454 SCGB3A2Q96PL1 93 aa15.03■□□□□ -0
PNKP-212ENST00000599454 NAA50Q9GZZ1 169 aaKnown RBP15.03■□□□□ -0
PNKP-212ENST00000599454 SLC35B3Q9H1N7 401 aa15.03■□□□□ -0
PNKP-212ENST00000599454 MIXL1Q9H2W2 232 aa15.03■□□□□ -0
PNKP-212ENST00000599454 RBKSQ9H477 322 aa15.03■□□□□ -0
PNKP-212ENST00000599454 RABL2AQ9UBK7 228 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms