RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 SDHCQ99643 169 aaPredicted RBP10.51□□□□□ -0.73
LIG1-218ENST00000599322 PBDC1Q9BVG4 233 aa10.51□□□□□ -0.73
LIG1-218ENST00000599322 TP53TG1Q9Y2A0 90 aa10.51□□□□□ -0.73
LIG1-218ENST00000599322 MPTX1A8MV57 137 aa10.5□□□□□ -0.73
LIG1-218ENST00000599322 SPRY2O43597 315 aa10.5□□□□□ -0.73
LIG1-218ENST00000599322 ADAP1O75689 374 aa10.5□□□□□ -0.73
LIG1-218ENST00000599322 PSG1P11464 419 aa10.5□□□□□ -0.73
LIG1-218ENST00000599322 DEFB131AP59861 70 aa10.5□□□□□ -0.73
LIG1-218ENST00000599322 GAMTQ14353 236 aa10.5□□□□□ -0.73
LIG1-218ENST00000599322 STHQ8IWL8 128 aa10.5□□□□□ -0.73
LIG1-218ENST00000599322 RNF125Q96EQ8 232 aa10.5□□□□□ -0.73
LIG1-218ENST00000599322 CSTL1Q9H114 145 aa10.5□□□□□ -0.73
LIG1-218ENST00000599322 C20orf85Q9H1P6 137 aa10.5□□□□□ -0.73
LIG1-218ENST00000599322 MAP6D1Q9H9H5 199 aa10.5□□□□□ -0.73
LIG1-218ENST00000599322 EDA2RQ9HAV5 297 aa10.5□□□□□ -0.73
LIG1-218ENST00000599322 GSKIPQ9P0R6 139 aa10.5□□□□□ -0.73
LIG1-218ENST00000599322 TENM2Q9NT68 2774 aa10.49□□□□□ -0.73
LIG1-218ENST00000599322 FAM240BA0A1B0GVZ2 78 aa10.49□□□□□ -0.73
LIG1-218ENST00000599322 SCGB1D2O95969 90 aa10.49□□□□□ -0.73
LIG1-218ENST00000599322 TCRBP04435 133 aa10.49□□□□□ -0.73
LIG1-218ENST00000599322 SNRPD3P62318 126 aaKnown RBP10.49□□□□□ -0.73
LIG1-218ENST00000599322 AKR1C1Q04828 323 aa10.49□□□□□ -0.73
LIG1-218ENST00000599322 IAH1Q2TAA2 248 aaPredicted RBP10.49□□□□□ -0.73
LIG1-218ENST00000599322 CASC10Q5T4H9 136 aa10.49□□□□□ -0.73
LIG1-218ENST00000599322 OR8G2PQ6IF36 304 aa10.49□□□□□ -0.73
LIG1-218ENST00000599322 TMEM217Q8N7C4 229 aa10.49□□□□□ -0.73
LIG1-218ENST00000599322 ZNF414Q96IQ9 312 aa10.49□□□□□ -0.73
LIG1-218ENST00000599322 WDR12Q9GZL7 423 aaKnown RBP10.49□□□□□ -0.73
LIG1-218ENST00000599322 PSENENQ9NZ42 101 aa10.49□□□□□ -0.73
LIG1-218ENST00000599322 FBXL17Q9UF56 701 aa10.49□□□□□ -0.73
LIG1-218ENST00000599322 STARD9Q9P2P6 4700 aa10.49□□□□□ -0.73
LIG1-218ENST00000599322 ID3Q02535 119 aa10.48□□□□□ -0.73
LIG1-218ENST00000599322 ZFAND6Q6FIF0 208 aa10.48□□□□□ -0.73
LIG1-218ENST00000599322 C16orf54Q6UWD8 224 aa10.48□□□□□ -0.73
LIG1-218ENST00000599322 S100A7AQ86SG5 101 aa10.48□□□□□ -0.73
LIG1-218ENST00000599322 LILRB2Q8N423 598 aa10.48□□□□□ -0.73
LIG1-218ENST00000599322 MITD1Q8WV92 249 aa10.48□□□□□ -0.73
LIG1-218ENST00000599322 RAB40CQ96S21 281 aa10.48□□□□□ -0.73
LIG1-218ENST00000599322 TRGV9Q99603 122 aa10.48□□□□□ -0.73
LIG1-218ENST00000599322 EPPK1P58107 5090 aaKnown RBP10.47□□□□□ -0.73
LIG1-218ENST00000599322 TRAV6A0A075B6T7 132 aa10.47□□□□□ -0.73
LIG1-218ENST00000599322 SMCO3A2RU48 225 aa10.47□□□□□ -0.73
LIG1-218ENST00000599322 H3BP45 60 aa10.47□□□□□ -0.73
LIG1-218ENST00000599322 L7N2F9 121 aa10.47□□□□□ -0.73
LIG1-218ENST00000599322 PLA2G10O15496 165 aa10.47□□□□□ -0.73
LIG1-218ENST00000599322 SSSCA1O60232 199 aa10.47□□□□□ -0.73
LIG1-218ENST00000599322 H2AFB2P0C5Z0 115 aa10.47□□□□□ -0.73
LIG1-218ENST00000599322 BTCP35070 178 aa10.47□□□□□ -0.73
LIG1-218ENST00000599322 LYZP61626 148 aa10.47□□□□□ -0.73
LIG1-218ENST00000599322 POLR2GP62487 172 aaKnown RBP eCLIP10.47□□□□□ -0.73
LIG1-218ENST00000599322 VAMP2P63027 116 aa10.47□□□□□ -0.73
LIG1-218ENST00000599322 USF2Q15853 346 aaPredicted RBP10.47□□□□□ -0.73
LIG1-218ENST00000599322 DEFB135Q30KP9 77 aa10.47□□□□□ -0.73
LIG1-218ENST00000599322 SIGLEC15Q6ZMC9 328 aa10.47□□□□□ -0.73
LIG1-218ENST00000599322 BPIFCQ8NFQ6 507 aa10.47□□□□□ -0.73
LIG1-218ENST00000599322 SMIM8Q96KF7 97 aa10.47□□□□□ -0.73
LIG1-218ENST00000599322 OVOL2Q9BRP0 275 aa10.47□□□□□ -0.73
LIG1-218ENST00000599322 U3KQE9 123 aa10.47□□□□□ -0.73
LIG1-218ENST00000599322 LYSTQ99698 3801 aa10.47□□□□□ -0.73
LIG1-218ENST00000599322 DNAH1Q9P2D7 4330 aa10.47□□□□□ -0.73
LIG1-218ENST00000599322 C5orf51A6NDU8 294 aa10.46□□□□□ -0.73
LIG1-218ENST00000599322 FAM25EA8MYX2 175 aa10.46□□□□□ -0.73
LIG1-218ENST00000599322 K7EQG2 157 aa10.46□□□□□ -0.73
LIG1-218ENST00000599322 BUB3O43684 328 aa10.46□□□□□ -0.73
LIG1-218ENST00000599322 ID1P41134 155 aa10.46□□□□□ -0.73
LIG1-218ENST00000599322 OR2F1Q13607 317 aa10.46□□□□□ -0.73
LIG1-218ENST00000599322 TMEM41BQ5BJD5 291 aa10.46□□□□□ -0.73
LIG1-218ENST00000599322 LEMD1Q68G75 181 aa10.46□□□□□ -0.73
LIG1-218ENST00000599322 ZBTB8BQ8NAP8 495 aaPredicted RBP10.46□□□□□ -0.73
LIG1-218ENST00000599322 OR10P1Q8NGE3 313 aa10.46□□□□□ -0.73
LIG1-218ENST00000599322 OR4D5Q8NGN0 318 aa10.46□□□□□ -0.73
LIG1-218ENST00000599322 ENKURQ8TC29 256 aa10.46□□□□□ -0.73
LIG1-218ENST00000599322 ZNF431Q8TF32 576 aaPredicted RBP10.46□□□□□ -0.73
LIG1-218ENST00000599322 GATAD1Q8WUU5 269 aa10.46□□□□□ -0.73
LIG1-218ENST00000599322 RNF183Q96D59 192 aa10.46□□□□□ -0.73
LIG1-218ENST00000599322 NRN1Q9NPD7 142 aa10.46□□□□□ -0.73
LIG1-218ENST00000599322 NUDT15Q9NV35 164 aa10.46□□□□□ -0.73
LIG1-218ENST00000599322 MGAT4CQ9UBM8 478 aa10.46□□□□□ -0.73
LIG1-218ENST00000599322 CSMD3Q7Z407 3707 aa10.45□□□□□ -0.74
LIG1-218ENST00000599322 ZNF688P0C7X2 276 aa10.45□□□□□ -0.74
LIG1-218ENST00000599322 PVALBP20472 110 aaPredicted RBP10.45□□□□□ -0.74
LIG1-218ENST00000599322 TAS2R30P59541 319 aa10.45□□□□□ -0.74
LIG1-218ENST00000599322 ZNF90Q03938 601 aa10.45□□□□□ -0.74
LIG1-218ENST00000599322 C1orf194Q5T5A4 169 aa10.45□□□□□ -0.74
LIG1-218ENST00000599322 SAMD13Q5VXD3 122 aa10.45□□□□□ -0.74
LIG1-218ENST00000599322 MORN3Q6PF18 240 aaPredicted RBP10.45□□□□□ -0.74
LIG1-218ENST00000599322 OR8I2Q8N0Y5 310 aa10.45□□□□□ -0.74
LIG1-218ENST00000599322 C12orf45Q8N5I9 185 aaPredicted RBP10.45□□□□□ -0.74
LIG1-218ENST00000599322 THAP8Q8NA92 274 aa10.45□□□□□ -0.74
LIG1-218ENST00000599322 GLMPQ8WWB7 406 aa10.45□□□□□ -0.74
LIG1-218ENST00000599322 GPN1Q9HCN4 374 aaPredicted RBP10.45□□□□□ -0.74
LIG1-218ENST00000599322 SEPSECSQ9HD40 501 aaKnown RBP10.45□□□□□ -0.74
LIG1-218ENST00000599322 PTTG2Q9NZH5 202 aa10.45□□□□□ -0.74
LIG1-218ENST00000599322 RNF24Q9Y225 148 aa10.45□□□□□ -0.74
LIG1-218ENST00000599322 TSC22D2O75157 780 aa10.44□□□□□ -0.74
LIG1-218ENST00000599322 CA1P00915 261 aaPredicted RBP10.44□□□□□ -0.74
LIG1-218ENST00000599322 NUTF2P61970 127 aaKnown RBP10.44□□□□□ -0.74
LIG1-218ENST00000599322 ZNF124Q15973 351 aa10.44□□□□□ -0.74
LIG1-218ENST00000599322 PSMG4Q5JS54 123 aa10.44□□□□□ -0.74
LIG1-218ENST00000599322 RARRES2Q99969 163 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms