RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 MFSD2BA6NFX1 497 aa10.47□□□□□ -0.73
SHKBP1-218ENST00000598907 NUP62P37198 522 aaPredicted RBP10.47□□□□□ -0.73
SHKBP1-218ENST00000598907 HBG1P69891 147 aa10.47□□□□□ -0.73
SHKBP1-218ENST00000598907 HBG2P69892 147 aa10.47□□□□□ -0.73
SHKBP1-218ENST00000598907 OR2F1Q13607 317 aa10.47□□□□□ -0.73
SHKBP1-218ENST00000598907 GAMTQ14353 236 aa10.47□□□□□ -0.73
SHKBP1-218ENST00000598907 LGALSLQ3ZCW2 172 aaPredicted RBP10.47□□□□□ -0.73
SHKBP1-218ENST00000598907 ZNF343Q6P1L6 599 aa10.47□□□□□ -0.73
SHKBP1-218ENST00000598907 SLC16A13Q7RTY0 426 aa10.47□□□□□ -0.73
SHKBP1-218ENST00000598907 KCNRGQ8N5I3 272 aa10.47□□□□□ -0.73
SHKBP1-218ENST00000598907 TMEM217Q8N7C4 229 aa10.47□□□□□ -0.73
SHKBP1-218ENST00000598907 TMEM116Q8NCL8 245 aa10.47□□□□□ -0.73
SHKBP1-218ENST00000598907 OR4X1Q8NH49 305 aa10.47□□□□□ -0.73
SHKBP1-218ENST00000598907 ZNF502Q8TBZ5 544 aa10.47□□□□□ -0.73
SHKBP1-218ENST00000598907 TXN2Q99757 166 aa10.47□□□□□ -0.73
SHKBP1-218ENST00000598907 ELOVL1Q9BW60 279 aa10.47□□□□□ -0.73
SHKBP1-218ENST00000598907 MUC4Q99102 2169 aa10.46□□□□□ -0.73
SHKBP1-218ENST00000598907 TRBV7-1A0A0A6YYK4 115 aa10.46□□□□□ -0.73
SHKBP1-218ENST00000598907 IGHV3-21A0A0B4J1V1 117 aa10.46□□□□□ -0.73
SHKBP1-218ENST00000598907 EIF2B2P49770 351 aaKnown RBP10.46□□□□□ -0.73
SHKBP1-218ENST00000598907 OR1S2Q8NGQ3 325 aa10.46□□□□□ -0.73
SHKBP1-218ENST00000598907 OR5C1Q8NGR4 320 aa10.46□□□□□ -0.73
SHKBP1-218ENST00000598907 EEF1AKMT3Q96AZ1 226 aa10.46□□□□□ -0.73
SHKBP1-218ENST00000598907 CCDC140Q96MF4 163 aa10.46□□□□□ -0.73
SHKBP1-218ENST00000598907 C21orf62Q9NYP8 219 aa10.46□□□□□ -0.73
SHKBP1-218ENST00000598907 DYNC1H1Q14204 4646 aaKnown RBP10.46□□□□□ -0.74
SHKBP1-218ENST00000598907 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.45□□□□□ -0.74
SHKBP1-218ENST00000598907 A0A0D9SG52 128 aa10.45□□□□□ -0.74
SHKBP1-218ENST00000598907 CLN5O75503 358 aa10.45□□□□□ -0.74
SHKBP1-218ENST00000598907 IGHV3-11P01762 117 aa10.45□□□□□ -0.74
SHKBP1-218ENST00000598907 IGHV3-48P01763 117 aa10.45□□□□□ -0.74
SHKBP1-218ENST00000598907 MFAP4P55083 255 aa10.45□□□□□ -0.74
SHKBP1-218ENST00000598907 LAMTOR1Q6IAA8 161 aa10.45□□□□□ -0.74
SHKBP1-218ENST00000598907 TMEM144Q7Z5S9 345 aa10.45□□□□□ -0.74
SHKBP1-218ENST00000598907 C9orf62Q8N4C0 152 aa10.45□□□□□ -0.74
SHKBP1-218ENST00000598907 PPP1R14BQ96C90 147 aa10.45□□□□□ -0.74
SHKBP1-218ENST00000598907 TMEM147Q9BVK8 224 aa10.45□□□□□ -0.74
SHKBP1-218ENST00000598907 WFDC1Q9HC57 220 aa10.45□□□□□ -0.74
SHKBP1-218ENST00000598907 PLA2G2EQ9NZK7 142 aa10.45□□□□□ -0.74
SHKBP1-218ENST00000598907 FBXL17Q9UF56 701 aa10.45□□□□□ -0.74
SHKBP1-218ENST00000598907 S4R3C0 116 aa10.45□□□□□ -0.74
SHKBP1-218ENST00000598907 LGALS1P09382 135 aaKnown RBP10.44□□□□□ -0.74
SHKBP1-218ENST00000598907 NPBWR1P48145 328 aa10.44□□□□□ -0.74
SHKBP1-218ENST00000598907 AP2S1P53680 142 aaPredicted RBP10.44□□□□□ -0.74
SHKBP1-218ENST00000598907 FAM209BQ5JX69 171 aa10.44□□□□□ -0.74
SHKBP1-218ENST00000598907 CEMP1Q6PRD7 247 aaPredicted RBP10.44□□□□□ -0.74
SHKBP1-218ENST00000598907 LILRB2Q8N423 598 aa10.44□□□□□ -0.74
SHKBP1-218ENST00000598907 THAP8Q8NA92 274 aa10.44□□□□□ -0.74
SHKBP1-218ENST00000598907 NPIPB3Q92617 1050 aa10.44□□□□□ -0.74
SHKBP1-218ENST00000598907 SLC35E1Q96K37 410 aa10.44□□□□□ -0.74
SHKBP1-218ENST00000598907 ATP5SQ99766 215 aa10.44□□□□□ -0.74
SHKBP1-218ENST00000598907 NPVFQ9HCQ7 196 aa10.44□□□□□ -0.74
SHKBP1-218ENST00000598907 ZC4H2Q9NQZ6 224 aa10.44□□□□□ -0.74
SHKBP1-218ENST00000598907 UQCC1Q9NVA1 299 aa10.44□□□□□ -0.74
SHKBP1-218ENST00000598907 WDR83OSQ9Y284 106 aa10.44□□□□□ -0.74
SHKBP1-218ENST00000598907 IGKV1D-37A0A075B6S9 117 aa10.43□□□□□ -0.74
SHKBP1-218ENST00000598907 IGKV1OR2-108A0A075B7D4 117 aa10.43□□□□□ -0.74
SHKBP1-218ENST00000598907 BOLA2-SMG1P6H3BVE0 249 aa10.43□□□□□ -0.74
SHKBP1-218ENST00000598907 TAAR5O14804 337 aa10.43□□□□□ -0.74
SHKBP1-218ENST00000598907 DFFBO76075 338 aa10.43□□□□□ -0.74
SHKBP1-218ENST00000598907 IGHV3-23P01764 117 aa10.43□□□□□ -0.74
SHKBP1-218ENST00000598907 CTSGP08311 255 aa10.43□□□□□ -0.74
SHKBP1-218ENST00000598907 RND2P52198 227 aa10.43□□□□□ -0.74
SHKBP1-218ENST00000598907 CLINT1Q14677 625 aa10.43□□□□□ -0.74
SHKBP1-218ENST00000598907 TMUB2Q71RG4 321 aa10.43□□□□□ -0.74
SHKBP1-218ENST00000598907 ZNF414Q96IQ9 312 aa10.43□□□□□ -0.74
SHKBP1-218ENST00000598907 PARD6GQ9BYG4 376 aaPredicted RBP10.43□□□□□ -0.74
SHKBP1-218ENST00000598907 SMIM3Q9BZL3 60 aa10.43□□□□□ -0.74
SHKBP1-218ENST00000598907 CYTL1Q9NRR1 136 aa10.43□□□□□ -0.74
SHKBP1-218ENST00000598907 SIGLEC8Q9NYZ4 499 aa10.43□□□□□ -0.74
SHKBP1-218ENST00000598907 HERC1Q15751 4861 aa10.43□□□□□ -0.74
SHKBP1-218ENST00000598907 TRAV30A0A087WSZ9 112 aa10.42□□□□□ -0.74
SHKBP1-218ENST00000598907 CLEC3BP05452 202 aa10.42□□□□□ -0.74
SHKBP1-218ENST00000598907 IGLC1P0CG04 106 aa10.42□□□□□ -0.74
SHKBP1-218ENST00000598907 ADMP35318 185 aa10.42□□□□□ -0.74
SHKBP1-218ENST00000598907 NKX2-5P52952 324 aaPredicted RBP10.42□□□□□ -0.74
SHKBP1-218ENST00000598907 CLEC19AQ6UXS0 136 aa10.42□□□□□ -0.74
SHKBP1-218ENST00000598907 LINC00322Q6ZN03 302 aaPredicted RBP10.42□□□□□ -0.74
SHKBP1-218ENST00000598907 ACY3Q96HD9 319 aa10.42□□□□□ -0.74
SHKBP1-218ENST00000598907 WFDC10AQ9H1F0 79 aa10.42□□□□□ -0.74
SHKBP1-218ENST00000598907 PEF1Q9UBV8 284 aaKnown RBP10.42□□□□□ -0.74
SHKBP1-218ENST00000598907 KLK5Q9Y337 293 aaPredicted RBP10.42□□□□□ -0.74
SHKBP1-218ENST00000598907 DNAH11Q96DT5 4516 aa10.42□□□□□ -0.74
SHKBP1-218ENST00000598907 DNAH6Q9C0G6 4158 aa10.41□□□□□ -0.74
SHKBP1-218ENST00000598907 OR2T8A6NH00 312 aa10.41□□□□□ -0.74
SHKBP1-218ENST00000598907 TGOLN2O43493 480 aa10.41□□□□□ -0.74
SHKBP1-218ENST00000598907 BCL2L11O43521 198 aa10.41□□□□□ -0.74
SHKBP1-218ENST00000598907 GNG7O60262 68 aa10.41□□□□□ -0.74
SHKBP1-218ENST00000598907 IGKV1-17P01599 117 aa10.41□□□□□ -0.74
SHKBP1-218ENST00000598907 TRBV12-3P01733 135 aa10.41□□□□□ -0.74
SHKBP1-218ENST00000598907 CD81P60033 236 aa10.41□□□□□ -0.74
SHKBP1-218ENST00000598907 AKR1C1Q04828 323 aa10.41□□□□□ -0.74
SHKBP1-218ENST00000598907 Q56UQ5 140 aa10.41□□□□□ -0.74
SHKBP1-218ENST00000598907 LGALS9CQ6DKI2 356 aa10.41□□□□□ -0.74
SHKBP1-218ENST00000598907 SPSB3Q6PJ21 355 aa10.41□□□□□ -0.74
SHKBP1-218ENST00000598907 TEPPQ6URK8 271 aa10.41□□□□□ -0.74
SHKBP1-218ENST00000598907 TRGV9Q99603 122 aa10.41□□□□□ -0.74
SHKBP1-218ENST00000598907 ARPC5LQ9BPX5 153 aa10.41□□□□□ -0.74
SHKBP1-218ENST00000598907 CHRDL1Q9BU40 450 aa10.41□□□□□ -0.74
SHKBP1-218ENST00000598907 WDR61Q9GZS3 305 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms