RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 RPL11P62913 178 aaKnown RBP10.32□□□□□ -0.76
UPF1-205ENST00000598209 PAFAH1B2P68402 229 aa10.32□□□□□ -0.76
UPF1-205ENST00000598209 ZNF90Q03938 601 aa10.32□□□□□ -0.76
UPF1-205ENST00000598209 ODF3L2Q3SX64 289 aa10.32□□□□□ -0.76
UPF1-205ENST00000598209 GBGT1Q8N5D6 347 aa10.32□□□□□ -0.76
UPF1-205ENST00000598209 THAP8Q8NA92 274 aa10.32□□□□□ -0.76
UPF1-205ENST00000598209 OR51G1Q8NGK1 321 aa10.32□□□□□ -0.76
UPF1-205ENST00000598209 GRAMD2BQ96HH9 432 aa10.32□□□□□ -0.76
UPF1-205ENST00000598209 RCHY1Q96PM5 261 aa10.32□□□□□ -0.76
UPF1-205ENST00000598209 CITED4Q96RK1 184 aa10.32□□□□□ -0.76
UPF1-205ENST00000598209 TRGV9Q99603 122 aa10.32□□□□□ -0.76
UPF1-205ENST00000598209 GPN1Q9HCN4 374 aaPredicted RBP10.32□□□□□ -0.76
UPF1-205ENST00000598209 IGKV1OR2-108A0A075B7D4 117 aa10.31□□□□□ -0.76
UPF1-205ENST00000598209 PMS2P5A8MQ11 134 aa10.31□□□□□ -0.76
UPF1-205ENST00000598209 INMT-MINDY4F8WBC2 141 aa10.31□□□□□ -0.76
UPF1-205ENST00000598209 TSC22D2O75157 780 aa10.31□□□□□ -0.76
UPF1-205ENST00000598209 FABP1P07148 127 aa10.31□□□□□ -0.76
UPF1-205ENST00000598209 TAS2R30P59541 319 aa10.31□□□□□ -0.76
UPF1-205ENST00000598209 OR8G2PQ6IF36 304 aa10.31□□□□□ -0.76
UPF1-205ENST00000598209 TMEM14EPQ6UXP3 125 aa10.31□□□□□ -0.76
UPF1-205ENST00000598209 GSG1LQ6UXU4 331 aa10.31□□□□□ -0.76
UPF1-205ENST00000598209 ACOT7LQ6ZUV0 252 aa10.31□□□□□ -0.76
UPF1-205ENST00000598209 WFDC3Q8IUB2 231 aa10.31□□□□□ -0.76
UPF1-205ENST00000598209 RNF125Q96EQ8 232 aa10.31□□□□□ -0.76
UPF1-205ENST00000598209 C2orf50Q96LR7 162 aa10.31□□□□□ -0.76
UPF1-205ENST00000598209 FAM110AQ9BQ89 295 aa10.31□□□□□ -0.76
UPF1-205ENST00000598209 SPATA25Q9BR10 227 aa10.31□□□□□ -0.76
UPF1-205ENST00000598209 MS4A6AQ9H2W1 248 aa10.31□□□□□ -0.76
UPF1-205ENST00000598209 RABAC1Q9UI14 185 aa10.31□□□□□ -0.76
UPF1-205ENST00000598209 LSM5Q9Y4Y9 91 aaKnown RBP10.31□□□□□ -0.76
UPF1-205ENST00000598209 K7EPK0 472 aa10.3□□□□□ -0.76
UPF1-205ENST00000598209 DNASE2O00115 360 aaPredicted RBP10.3□□□□□ -0.76
UPF1-205ENST00000598209 PRAF2O60831 178 aa10.3□□□□□ -0.76
UPF1-205ENST00000598209 CCNKO75909 580 aa10.3□□□□□ -0.76
UPF1-205ENST00000598209 METTL15P1P0C7V9 234 aa10.3□□□□□ -0.76
UPF1-205ENST00000598209 AKR1C1Q04828 323 aa10.3□□□□□ -0.76
UPF1-205ENST00000598209 OR2F1Q13607 317 aa10.3□□□□□ -0.76
UPF1-205ENST00000598209 C16orf54Q6UWD8 224 aa10.3□□□□□ -0.76
UPF1-205ENST00000598209 WWC2-AS2Q96NR7 200 aa10.3□□□□□ -0.76
UPF1-205ENST00000598209 PBDC1Q9BVG4 233 aa10.3□□□□□ -0.76
UPF1-205ENST00000598209 LOC102724200A0A096LPH7 203 aaPredicted RBP10.29□□□□□ -0.76
UPF1-205ENST00000598209 TRAV2A0A0B4J234 112 aa10.29□□□□□ -0.76
UPF1-205ENST00000598209 SMCO3A2RU48 225 aa10.29□□□□□ -0.76
UPF1-205ENST00000598209 C7orf66A4D0T2 115 aa10.29□□□□□ -0.76
UPF1-205ENST00000598209 SNRPGP15A8MWD9 76 aa10.29□□□□□ -0.76
UPF1-205ENST00000598209 L7N2F9 121 aa10.29□□□□□ -0.76
UPF1-205ENST00000598209 CMC4P56277 68 aaPredicted RBP10.29□□□□□ -0.76
UPF1-205ENST00000598209 LYZP61626 148 aa10.29□□□□□ -0.76
UPF1-205ENST00000598209 VAMP2P63027 116 aa10.29□□□□□ -0.76
UPF1-205ENST00000598209 TMEM144Q7Z5S9 345 aa10.29□□□□□ -0.76
UPF1-205ENST00000598209 STXBP6Q8NFX7 210 aa10.29□□□□□ -0.76
UPF1-205ENST00000598209 OR10P1Q8NGE3 313 aa10.29□□□□□ -0.76
UPF1-205ENST00000598209 GLMPQ8WWB7 406 aa10.29□□□□□ -0.76
UPF1-205ENST00000598209 MARVELD1Q9BSK0 173 aa10.29□□□□□ -0.76
UPF1-205ENST00000598209 GGTLC1Q9BX51 225 aa10.29□□□□□ -0.76
UPF1-205ENST00000598209 BUB3O43684 328 aa10.28□□□□□ -0.76
UPF1-205ENST00000598209 EIF2B2P49770 351 aaKnown RBP10.28□□□□□ -0.76
UPF1-205ENST00000598209 RRAS2P62070 204 aaPredicted RBP10.28□□□□□ -0.76
UPF1-205ENST00000598209 DLK1P80370 383 aa10.28□□□□□ -0.76
UPF1-205ENST00000598209 APRG1Q8IVJ8 170 aa10.28□□□□□ -0.76
UPF1-205ENST00000598209 MAP6D1Q9H9H5 199 aa10.28□□□□□ -0.76
UPF1-205ENST00000598209 RETNQ9HD89 108 aa10.28□□□□□ -0.76
UPF1-205ENST00000598209 HELTA6NFD8 242 aa10.27□□□□□ -0.77
UPF1-205ENST00000598209 GOSR2O14653 212 aa10.27□□□□□ -0.77
UPF1-205ENST00000598209 NUP62P37198 522 aaPredicted RBP10.27□□□□□ -0.77
UPF1-205ENST00000598209 BCAP31P51572 246 aa10.27□□□□□ -0.77
UPF1-205ENST00000598209 S100A10P60903 97 aa10.27□□□□□ -0.77
UPF1-205ENST00000598209 IL15RAQ13261 267 aa10.27□□□□□ -0.77
UPF1-205ENST00000598209 RAB32Q13637 225 aa10.27□□□□□ -0.77
UPF1-205ENST00000598209 ZNF124Q15973 351 aa10.27□□□□□ -0.77
UPF1-205ENST00000598209 FAM24BQ8N5W8 94 aa10.27□□□□□ -0.77
UPF1-205ENST00000598209 C11orf1Q9H5F2 150 aa10.27□□□□□ -0.77
UPF1-205ENST00000598209 MGAT4CQ9UBM8 478 aa10.27□□□□□ -0.77
UPF1-205ENST00000598209 PFDN2Q9UHV9 154 aa10.27□□□□□ -0.77
UPF1-205ENST00000598209 TENM3Q9P273 2699 aa10.27□□□□□ -0.77
UPF1-205ENST00000598209 FNDC10F2Z333 226 aa10.26□□□□□ -0.77
UPF1-205ENST00000598209 K7EQG2 157 aa10.26□□□□□ -0.77
UPF1-205ENST00000598209 SIX6O95475 246 aa10.26□□□□□ -0.77
UPF1-205ENST00000598209 CFDP00746 253 aaPredicted RBP10.26□□□□□ -0.77
UPF1-205ENST00000598209 PVALBP20472 110 aaPredicted RBP10.26□□□□□ -0.77
UPF1-205ENST00000598209 GATA2P23769 480 aaPredicted RBP10.26□□□□□ -0.77
UPF1-205ENST00000598209 CAV2P51636 162 aa10.26□□□□□ -0.77
UPF1-205ENST00000598209 AP2S1P53680 142 aaPredicted RBP10.26□□□□□ -0.77
UPF1-205ENST00000598209 DEFB131AP59861 70 aa10.26□□□□□ -0.77
UPF1-205ENST00000598209 ARL16Q0P5N6 197 aa10.26□□□□□ -0.77
UPF1-205ENST00000598209 SIGLEC15Q6ZMC9 328 aa10.26□□□□□ -0.77
UPF1-205ENST00000598209 TMEM182Q6ZP80 229 aaPredicted RBP10.26□□□□□ -0.77
UPF1-205ENST00000598209 BPIFCQ8NFQ6 507 aa10.26□□□□□ -0.77
UPF1-205ENST00000598209 DCANP1Q8TF63 244 aa10.26□□□□□ -0.77
UPF1-205ENST00000598209 PPP1R14BQ96C90 147 aa10.26□□□□□ -0.77
UPF1-205ENST00000598209 AGRNO00468 2067 aa10.26□□□□□ -0.77
UPF1-205ENST00000598209 FAM24AA6NFZ4 105 aa10.25□□□□□ -0.77
UPF1-205ENST00000598209 RPL35AP18077 110 aaKnown RBP10.25□□□□□ -0.77
UPF1-205ENST00000598209 APOC4P55056 127 aa10.25□□□□□ -0.77
UPF1-205ENST00000598209 CYP2G1PQ6ZSU1 146 aa10.25□□□□□ -0.77
UPF1-205ENST00000598209 STPG3Q8N7X2 389 aa10.25□□□□□ -0.77
UPF1-205ENST00000598209 NPVFQ9HCQ7 196 aa10.25□□□□□ -0.77
UPF1-205ENST00000598209 DEDDO75618 318 aa10.24□□□□□ -0.77
UPF1-205ENST00000598209 ZNF688P0C7X2 276 aa10.24□□□□□ -0.77
UPF1-205ENST00000598209 ORM2P19652 201 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms