RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 ZNF90Q03938 601 aa12.44□□□□□ -0.42
SSBP4-204ENST00000597724 NRARPQ7Z6K4 114 aa12.44□□□□□ -0.42
SSBP4-204ENST00000597724 GBGT1Q8N5D6 347 aa12.44□□□□□ -0.42
SSBP4-204ENST00000597724 OR51G1Q8NGK1 321 aa12.44□□□□□ -0.42
SSBP4-204ENST00000597724 NARS2Q96I59 477 aaKnown RBP12.44□□□□□ -0.42
SSBP4-204ENST00000597724 RAB40CQ96S21 281 aa12.44□□□□□ -0.42
SSBP4-204ENST00000597724 SPATA25Q9BR10 227 aa12.44□□□□□ -0.42
SSBP4-204ENST00000597724 MS4A6AQ9H2W1 248 aa12.44□□□□□ -0.42
SSBP4-204ENST00000597724 MBPP02686 304 aaPredicted RBP12.43□□□□□ -0.42
SSBP4-204ENST00000597724 P2RY1P47900 373 aa12.43□□□□□ -0.42
SSBP4-204ENST00000597724 TAS2R30P59541 319 aa12.43□□□□□ -0.42
SSBP4-204ENST00000597724 THAP8Q8NA92 274 aa12.43□□□□□ -0.42
SSBP4-204ENST00000597724 TRGV9Q99603 122 aa12.43□□□□□ -0.42
SSBP4-204ENST00000597724 RCL1Q9Y2P8 373 aaKnown RBP12.43□□□□□ -0.42
SSBP4-204ENST00000597724 TRAV2A0A0B4J234 112 aa12.42□□□□□ -0.42
SSBP4-204ENST00000597724 PMS2P5A8MQ11 134 aa12.42□□□□□ -0.42
SSBP4-204ENST00000597724 FAM25EA8MYX2 175 aa12.42□□□□□ -0.42
SSBP4-204ENST00000597724 FABP1P07148 127 aa12.42□□□□□ -0.42
SSBP4-204ENST00000597724 CMC4P56277 68 aaPredicted RBP12.42□□□□□ -0.42
SSBP4-204ENST00000597724 RPL11P62913 178 aaKnown RBP12.42□□□□□ -0.42
SSBP4-204ENST00000597724 C16orf54Q6UWD8 224 aa12.42□□□□□ -0.42
SSBP4-204ENST00000597724 RNF125Q96EQ8 232 aa12.42□□□□□ -0.42
SSBP4-204ENST00000597724 GRAMD2BQ96HH9 432 aa12.42□□□□□ -0.42
SSBP4-204ENST00000597724 GGTLC1Q9BX51 225 aa12.42□□□□□ -0.42
SSBP4-204ENST00000597724 LOC102724200A0A096LPH7 203 aaPredicted RBP12.41□□□□□ -0.42
SSBP4-204ENST00000597724 C7orf66A4D0T2 115 aa12.41□□□□□ -0.42
SSBP4-204ENST00000597724 C5orf51A6NDU8 294 aa12.41□□□□□ -0.42
SSBP4-204ENST00000597724 DNASE2O00115 360 aaPredicted RBP12.41□□□□□ -0.42
SSBP4-204ENST00000597724 OR8G2PQ6IF36 304 aa12.41□□□□□ -0.42
SSBP4-204ENST00000597724 TMEM14EPQ6UXP3 125 aa12.41□□□□□ -0.42
SSBP4-204ENST00000597724 ACOT7LQ6ZUV0 252 aa12.41□□□□□ -0.42
SSBP4-204ENST00000597724 WFDC3Q8IUB2 231 aa12.41□□□□□ -0.42
SSBP4-204ENST00000597724 C2orf50Q96LR7 162 aa12.41□□□□□ -0.42
SSBP4-204ENST00000597724 GPN1Q9HCN4 374 aaPredicted RBP12.41□□□□□ -0.42
SSBP4-204ENST00000597724 RABAC1Q9UI14 185 aa12.41□□□□□ -0.42
SSBP4-204ENST00000597724 SNRPGP15A8MWD9 76 aa12.4□□□□□ -0.42
SSBP4-204ENST00000597724 BUB3O43684 328 aa12.4□□□□□ -0.42
SSBP4-204ENST00000597724 TSC22D2O75157 780 aa12.4□□□□□ -0.42
SSBP4-204ENST00000597724 METTL15P1P0C7V9 234 aa12.4□□□□□ -0.42
SSBP4-204ENST00000597724 EIF2B2P49770 351 aaKnown RBP12.4□□□□□ -0.42
SSBP4-204ENST00000597724 DEFA1P59665 94 aa12.4□□□□□ -0.42
SSBP4-204ENST00000597724 DEFA3P59666 94 aa12.4□□□□□ -0.42
SSBP4-204ENST00000597724 APRG1Q8IVJ8 170 aa12.4□□□□□ -0.42
SSBP4-204ENST00000597724 GLMPQ8WWB7 406 aa12.4□□□□□ -0.42
SSBP4-204ENST00000597724 PBDC1Q9BVG4 233 aa12.4□□□□□ -0.42
SSBP4-204ENST00000597724 MAP6D1Q9H9H5 199 aa12.4□□□□□ -0.42
SSBP4-204ENST00000597724 HELTA6NFD8 242 aa12.39□□□□□ -0.43
SSBP4-204ENST00000597724 INMT-MINDY4F8WBC2 141 aa12.39□□□□□ -0.43
SSBP4-204ENST00000597724 PRAF2O60831 178 aa12.39□□□□□ -0.43
SSBP4-204ENST00000597724 CCNKO75909 580 aa12.39□□□□□ -0.43
SSBP4-204ENST00000597724 AP2S1P53680 142 aaPredicted RBP12.39□□□□□ -0.43
SSBP4-204ENST00000597724 AKR1C1Q04828 323 aa12.39□□□□□ -0.43
SSBP4-204ENST00000597724 IL15RAQ13261 267 aa12.39□□□□□ -0.43
SSBP4-204ENST00000597724 OR2F1Q13607 317 aa12.39□□□□□ -0.43
SSBP4-204ENST00000597724 GSG1LQ6UXU4 331 aa12.39□□□□□ -0.43
SSBP4-204ENST00000597724 TMEM144Q7Z5S9 345 aa12.39□□□□□ -0.43
SSBP4-204ENST00000597724 STXBP6Q8NFX7 210 aa12.39□□□□□ -0.43
SSBP4-204ENST00000597724 DCANP1Q8TF63 244 aa12.39□□□□□ -0.43
SSBP4-204ENST00000597724 MARVELD1Q9BSK0 173 aa12.39□□□□□ -0.43
SSBP4-204ENST00000597724 RETNQ9HD89 108 aa12.39□□□□□ -0.43
SSBP4-204ENST00000597724 K7EPK0 472 aa12.38□□□□□ -0.43
SSBP4-204ENST00000597724 K7EQG2 157 aa12.38□□□□□ -0.43
SSBP4-204ENST00000597724 CFDP00746 253 aaPredicted RBP12.38□□□□□ -0.43
SSBP4-204ENST00000597724 LYZP61626 148 aa12.38□□□□□ -0.43
SSBP4-204ENST00000597724 DLK1P80370 383 aa12.38□□□□□ -0.43
SSBP4-204ENST00000597724 ZNF124Q15973 351 aa12.38□□□□□ -0.43
SSBP4-204ENST00000597724 FAM24BQ8N5W8 94 aa12.38□□□□□ -0.43
SSBP4-204ENST00000597724 OR10P1Q8NGE3 313 aa12.38□□□□□ -0.43
SSBP4-204ENST00000597724 C11orf1Q9H5F2 150 aa12.38□□□□□ -0.43
SSBP4-204ENST00000597724 PFDN2Q9UHV9 154 aa12.38□□□□□ -0.43
SSBP4-204ENST00000597724 LSM5Q9Y4Y9 91 aaKnown RBP12.38□□□□□ -0.43
SSBP4-204ENST00000597724 SMCO3A2RU48 225 aa12.37□□□□□ -0.43
SSBP4-204ENST00000597724 FNDC10F2Z333 226 aa12.37□□□□□ -0.43
SSBP4-204ENST00000597724 L7N2F9 121 aa12.37□□□□□ -0.43
SSBP4-204ENST00000597724 NUP62P37198 522 aaPredicted RBP12.37□□□□□ -0.43
SSBP4-204ENST00000597724 VAMP2P63027 116 aa12.37□□□□□ -0.43
SSBP4-204ENST00000597724 ARL16Q0P5N6 197 aa12.37□□□□□ -0.43
SSBP4-204ENST00000597724 TMEM182Q6ZP80 229 aaPredicted RBP12.37□□□□□ -0.43
SSBP4-204ENST00000597724 STPG3Q8N7X2 389 aa12.37□□□□□ -0.43
SSBP4-204ENST00000597724 GATA2P23769 480 aaPredicted RBP12.36□□□□□ -0.43
SSBP4-204ENST00000597724 APOC4P55056 127 aa12.36□□□□□ -0.43
SSBP4-204ENST00000597724 DEFB131AP59861 70 aa12.36□□□□□ -0.43
SSBP4-204ENST00000597724 RRAS2P62070 204 aaPredicted RBP12.36□□□□□ -0.43
SSBP4-204ENST00000597724 SIGLEC15Q6ZMC9 328 aa12.36□□□□□ -0.43
SSBP4-204ENST00000597724 NPVFQ9HCQ7 196 aa12.36□□□□□ -0.43
SSBP4-204ENST00000597724 KIR2DL5BA0A0G2JN68 375 aa12.35□□□□□ -0.43
SSBP4-204ENST00000597724 KIR2DL5BA0A0G2JPC4 375 aa12.35□□□□□ -0.43
SSBP4-204ENST00000597724 RPL35AP18077 110 aaKnown RBP12.35□□□□□ -0.43
SSBP4-204ENST00000597724 RAB32Q13637 225 aa12.35□□□□□ -0.43
SSBP4-204ENST00000597724 KIR2DL5AQ8N109 375 aa12.35□□□□□ -0.43
SSBP4-204ENST00000597724 BPIFCQ8NFQ6 507 aa12.35□□□□□ -0.43
SSBP4-204ENST00000597724 KIR2DL5BQ8NHK3 375 aa12.35□□□□□ -0.43
SSBP4-204ENST00000597724 GGACTQ9BVM4 153 aa12.35□□□□□ -0.43
SSBP4-204ENST00000597724 EDA2RQ9HAV5 297 aa12.35□□□□□ -0.43
SSBP4-204ENST00000597724 UBE2CO00762 179 aa12.34□□□□□ -0.43
SSBP4-204ENST00000597724 DEDDO75618 318 aa12.34□□□□□ -0.43
SSBP4-204ENST00000597724 PVALBP20472 110 aaPredicted RBP12.34□□□□□ -0.43
SSBP4-204ENST00000597724 BCAP31P51572 246 aa12.34□□□□□ -0.43
SSBP4-204ENST00000597724 C1orf194Q5T5A4 169 aa12.34□□□□□ -0.43
SSBP4-204ENST00000597724 CYP2G1PQ6ZSU1 146 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms