RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 ANKRD34BA5PLL1 514 aa9.29□□□□□ -0.92
SHKBP1-213ENST00000597325 TGOLN2O43493 480 aa9.29□□□□□ -0.92
SHKBP1-213ENST00000597325 IGLC1P0CG04 106 aa9.29□□□□□ -0.92
SHKBP1-213ENST00000597325 CDX1P47902 265 aaPredicted RBP9.29□□□□□ -0.92
SHKBP1-213ENST00000597325 CAMLGP49069 296 aa9.29□□□□□ -0.92
SHKBP1-213ENST00000597325 RELQ04864 619 aaPredicted RBP9.29□□□□□ -0.92
SHKBP1-213ENST00000597325 TCTEX1D4Q5JR98 221 aa9.29□□□□□ -0.92
SHKBP1-213ENST00000597325 SLC51BQ86UW2 128 aa9.29□□□□□ -0.92
SHKBP1-213ENST00000597325 THAP8Q8NA92 274 aa9.29□□□□□ -0.92
SHKBP1-213ENST00000597325 HSD17B11Q8NBQ5 300 aa9.29□□□□□ -0.92
SHKBP1-213ENST00000597325 GNPNAT1Q96EK6 184 aaPredicted RBP9.29□□□□□ -0.92
SHKBP1-213ENST00000597325 TRGV9Q99603 122 aa9.29□□□□□ -0.92
SHKBP1-213ENST00000597325 CITED2Q99967 270 aaPredicted RBP9.29□□□□□ -0.92
SHKBP1-213ENST00000597325 B9D2Q9BPU9 175 aa9.29□□□□□ -0.92
SHKBP1-213ENST00000597325 NPCDR1Q9BY65 106 aa9.29□□□□□ -0.92
SHKBP1-213ENST00000597325 CYTL1Q9NRR1 136 aa9.29□□□□□ -0.92
SHKBP1-213ENST00000597325 LSM4Q9Y4Z0 139 aaKnown RBP9.29□□□□□ -0.92
SHKBP1-213ENST00000597325 A0A1W2PRX2 142 aa9.28□□□□□ -0.92
SHKBP1-213ENST00000597325 AGPAT2O15120 278 aa9.28□□□□□ -0.92
SHKBP1-213ENST00000597325 CLEC3BP05452 202 aa9.28□□□□□ -0.92
SHKBP1-213ENST00000597325 KIAA0141Q14154 515 aaPredicted RBP9.28□□□□□ -0.92
SHKBP1-213ENST00000597325 TIGITQ495A1 244 aa9.28□□□□□ -0.92
SHKBP1-213ENST00000597325 CYP2G1PQ6ZSU1 146 aa9.28□□□□□ -0.92
SHKBP1-213ENST00000597325 STOML3Q8TAV4 291 aa9.28□□□□□ -0.92
SHKBP1-213ENST00000597325 MGST2Q99735 147 aa9.28□□□□□ -0.92
SHKBP1-213ENST00000597325 PEF1Q9UBV8 284 aaKnown RBP9.28□□□□□ -0.92
SHKBP1-213ENST00000597325 BOLA1Q9Y3E2 137 aa9.28□□□□□ -0.92
SHKBP1-213ENST00000597325 IGKV1OR2-108A0A075B7D4 117 aa9.27□□□□□ -0.93
SHKBP1-213ENST00000597325 PPP5D1E7EU14 171 aa9.27□□□□□ -0.93
SHKBP1-213ENST00000597325 F8W735 103 aaPredicted RBP9.27□□□□□ -0.93
SHKBP1-213ENST00000597325 GGCTO75223 188 aaKnown RBP9.27□□□□□ -0.93
SHKBP1-213ENST00000597325 YPEL3P61236 119 aaPredicted RBP9.27□□□□□ -0.93
SHKBP1-213ENST00000597325 SELENOTP62341 195 aa9.27□□□□□ -0.93
SHKBP1-213ENST00000597325 RUNX1Q01196 453 aa9.27□□□□□ -0.93
SHKBP1-213ENST00000597325 ZNF616Q08AN1 781 aa9.27□□□□□ -0.93
SHKBP1-213ENST00000597325 EIF5AL1Q6IS14 154 aaKnown RBP9.27□□□□□ -0.93
SHKBP1-213ENST00000597325 NDUFA11Q86Y39 141 aa9.27□□□□□ -0.93
SHKBP1-213ENST00000597325 GINS3Q9BRX5 216 aa9.27□□□□□ -0.93
SHKBP1-213ENST00000597325 RSG1Q9BU20 258 aa9.27□□□□□ -0.93
SHKBP1-213ENST00000597325 GGTLC1Q9BX51 225 aa9.27□□□□□ -0.93
SHKBP1-213ENST00000597325 TIMM9Q9Y5J7 89 aa9.27□□□□□ -0.93
SHKBP1-213ENST00000597325 IGKV1D-37A0A075B6S9 117 aa9.26□□□□□ -0.93
SHKBP1-213ENST00000597325 TOMM40O96008 361 aa9.26□□□□□ -0.93
SHKBP1-213ENST00000597325 IGKV1-17P01599 117 aa9.26□□□□□ -0.93
SHKBP1-213ENST00000597325 TRBV12-3P01733 135 aa9.26□□□□□ -0.93
SHKBP1-213ENST00000597325 CTSGP08311 255 aa9.26□□□□□ -0.93
SHKBP1-213ENST00000597325 RD3LP0DJH9 198 aa9.26□□□□□ -0.93
SHKBP1-213ENST00000597325 ATP6V0CP27449 155 aa9.26□□□□□ -0.93
SHKBP1-213ENST00000597325 ZNF90Q03938 601 aa9.26□□□□□ -0.93
SHKBP1-213ENST00000597325 ZNF600Q6ZNG1 722 aa9.26□□□□□ -0.93
SHKBP1-213ENST00000597325 BAP18Q8IXM2 172 aa9.26□□□□□ -0.93
SHKBP1-213ENST00000597325 BPIFCQ8NFQ6 507 aa9.26□□□□□ -0.93
SHKBP1-213ENST00000597325 Q8WTZ3 238 aa9.26□□□□□ -0.93
SHKBP1-213ENST00000597325 ST8SIA2Q92186 375 aa9.26□□□□□ -0.93
SHKBP1-213ENST00000597325 DPF1Q92782 380 aa9.26□□□□□ -0.93
SHKBP1-213ENST00000597325 PSMG3Q9BT73 122 aaPredicted RBP9.26□□□□□ -0.93
SHKBP1-213ENST00000597325 CHRDL1Q9BU40 450 aa9.26□□□□□ -0.93
SHKBP1-213ENST00000597325 PXMP4Q9Y6I8 212 aa9.26□□□□□ -0.93
SHKBP1-213ENST00000597325 PLECQ15149 4684 aaKnown RBP9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 I3L521 148 aa9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 BMPR1BO00238 502 aa9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 CFDP00746 253 aaPredicted RBP9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 HSPB1P04792 205 aaKnown RBP9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 LINC00869P0C866 280 aa9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 ZP3P21754 424 aa9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 ADMP35318 185 aa9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 RPL29P47914 159 aaKnown RBP9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 B2MP61769 119 aa9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 RPEL1Q2QD12 228 aa9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 NSUN5P1Q3KNT7 163 aa9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 DEFB121Q5J5C9 76 aa9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 MIC13Q5XKP0 118 aa9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 Q6ZRG5 221 aa9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 C18orf65Q6ZTR6 163 aa9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 C8orf86Q6ZUL3 223 aa9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 STPG3Q8N7X2 389 aa9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 OR51G1Q8NGK1 321 aa9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 SH3BGRL3Q9H299 93 aa9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 ARV1Q9H2C2 271 aa9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 SLC25A32Q9H2D1 315 aa9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 SLC45A2Q9UMX9 530 aa9.25□□□□□ -0.93
SHKBP1-213ENST00000597325 IGHV4OR15-8A0A075B7B6 117 aa9.24□□□□□ -0.93
SHKBP1-213ENST00000597325 A0A087WW49 117 aa9.24□□□□□ -0.93
SHKBP1-213ENST00000597325 IGHV3-35A0A0C4DH35 117 aa9.24□□□□□ -0.93
SHKBP1-213ENST00000597325 WI2-2373I1.2A0A1W2PRP0 233 aa9.24□□□□□ -0.93
SHKBP1-213ENST00000597325 LINC01619G3V211 115 aa9.24□□□□□ -0.93
SHKBP1-213ENST00000597325 YIF1AO95070 293 aa9.24□□□□□ -0.93
SHKBP1-213ENST00000597325 IL4P05112 153 aa9.24□□□□□ -0.93
SHKBP1-213ENST00000597325 SPP1P10451 314 aa9.24□□□□□ -0.93
SHKBP1-213ENST00000597325 PSG1P11464 419 aa9.24□□□□□ -0.93
SHKBP1-213ENST00000597325 ELLP55199 621 aaPredicted RBP9.24□□□□□ -0.93
SHKBP1-213ENST00000597325 LYZP61626 148 aa9.24□□□□□ -0.93
SHKBP1-213ENST00000597325 DEFB136Q30KP8 78 aa9.24□□□□□ -0.93
SHKBP1-213ENST00000597325 FFAR4Q5NUL3 377 aa9.24□□□□□ -0.93
SHKBP1-213ENST00000597325 OR1N2Q8NGR9 330 aa9.24□□□□□ -0.93
SHKBP1-213ENST00000597325 OR2G3Q8NGZ4 309 aa9.24□□□□□ -0.93
SHKBP1-213ENST00000597325 PHYHIPLQ96FC7 376 aa9.24□□□□□ -0.93
SHKBP1-213ENST00000597325 SLC39A9Q9NUM3 307 aa9.24□□□□□ -0.93
SHKBP1-213ENST00000597325 PUS1Q9Y606 427 aaKnown RBP eCLIP9.24□□□□□ -0.93
SHKBP1-213ENST00000597325 NDUFA4O00483 81 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms