RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 GAMTQ14353 236 aa13.11□□□□□ -0.31
CHMP2A-203ENST00000597209 MORN3Q6PF18 240 aaPredicted RBP13.11□□□□□ -0.31
CHMP2A-203ENST00000597209 TRPT1Q86TN4 253 aaKnown RBP13.11□□□□□ -0.31
CHMP2A-203ENST00000597209 CENPSQ8N2Z9 138 aa13.11□□□□□ -0.31
CHMP2A-203ENST00000597209 OR51G1Q8NGK1 321 aa13.11□□□□□ -0.31
CHMP2A-203ENST00000597209 OR11H2Q8NH07 326 aa13.11□□□□□ -0.31
CHMP2A-203ENST00000597209 NAP1L6A6NFF2 107 aa13.1□□□□□ -0.31
CHMP2A-203ENST00000597209 ZNF688P0C7X2 276 aa13.1□□□□□ -0.31
CHMP2A-203ENST00000597209 SPP1P10451 314 aa13.1□□□□□ -0.31
CHMP2A-203ENST00000597209 RAB11AP62491 216 aa13.1□□□□□ -0.31
CHMP2A-203ENST00000597209 OR8G2PQ6IF36 304 aa13.1□□□□□ -0.31
CHMP2A-203ENST00000597209 RNF125Q96EQ8 232 aa13.1□□□□□ -0.31
CHMP2A-203ENST00000597209 SLC35E1Q96K37 410 aa13.1□□□□□ -0.31
CHMP2A-203ENST00000597209 CIB3Q96Q77 187 aaPredicted RBP13.1□□□□□ -0.31
CHMP2A-203ENST00000597209 PFDN2Q9UHV9 154 aa13.1□□□□□ -0.31
CHMP2A-203ENST00000597209 KLK5Q9Y337 293 aaPredicted RBP13.1□□□□□ -0.31
CHMP2A-203ENST00000597209 PLECQ15149 4684 aaKnown RBP13.1□□□□□ -0.31
CHMP2A-203ENST00000597209 IGKV1D-37A0A075B6S9 117 aa13.09□□□□□ -0.31
CHMP2A-203ENST00000597209 ZFP92A6NM28 416 aa13.09□□□□□ -0.31
CHMP2A-203ENST00000597209 FABP1P07148 127 aa13.09□□□□□ -0.31
CHMP2A-203ENST00000597209 NRN1Q9NPD7 142 aa13.09□□□□□ -0.31
CHMP2A-203ENST00000597209 GIG44P09565 113 aaPredicted RBP13.08□□□□□ -0.32
CHMP2A-203ENST00000597209 RPP30P78346 268 aaKnown RBP13.08□□□□□ -0.32
CHMP2A-203ENST00000597209 SIGLEC15Q6ZMC9 328 aa13.08□□□□□ -0.32
CHMP2A-203ENST00000597209 LINC00476Q8WZB0 136 aa13.08□□□□□ -0.32
CHMP2A-203ENST00000597209 ALMS1Q8TCU4 4167 aa13.08□□□□□ -0.32
CHMP2A-203ENST00000597209 KNCNA6PVL3 124 aa13.07□□□□□ -0.32
CHMP2A-203ENST00000597209 SYNGR2O43760 224 aa13.07□□□□□ -0.32
CHMP2A-203ENST00000597209 IAPPP10997 89 aa13.07□□□□□ -0.32
CHMP2A-203ENST00000597209 SNRPD3P62318 126 aaKnown RBP13.07□□□□□ -0.32
CHMP2A-203ENST00000597209 BAK1Q16611 211 aa13.07□□□□□ -0.32
CHMP2A-203ENST00000597209 RAB40CQ96S21 281 aa13.07□□□□□ -0.32
CHMP2A-203ENST00000597209 TRGV9Q99603 122 aa13.07□□□□□ -0.32
CHMP2A-203ENST00000597209 MFFQ9GZY8 342 aa13.07□□□□□ -0.32
CHMP2A-203ENST00000597209 HYDINQ4G0P3 5121 aa13.07□□□□□ -0.32
CHMP2A-203ENST00000597209 NDUFB6O95139 128 aa13.06□□□□□ -0.32
CHMP2A-203ENST00000597209 HOXB5P09067 269 aa13.06□□□□□ -0.32
CHMP2A-203ENST00000597209 INPP1P49441 399 aa13.06□□□□□ -0.32
CHMP2A-203ENST00000597209 ZNF90Q03938 601 aa13.06□□□□□ -0.32
CHMP2A-203ENST00000597209 PSMG4Q5JS54 123 aa13.06□□□□□ -0.32
CHMP2A-203ENST00000597209 ACTL10Q5JWF8 245 aa13.06□□□□□ -0.32
CHMP2A-203ENST00000597209 C1orf194Q5T5A4 169 aa13.06□□□□□ -0.32
CHMP2A-203ENST00000597209 GGNBP1Q5YKI7 109 aa13.06□□□□□ -0.32
CHMP2A-203ENST00000597209 TRIQKQ629K1 86 aa13.06□□□□□ -0.32
CHMP2A-203ENST00000597209 THAP8Q8NA92 274 aa13.06□□□□□ -0.32
CHMP2A-203ENST00000597209 C11orf45Q8TAV5 145 aa13.06□□□□□ -0.32
CHMP2A-203ENST00000597209 PHLDA1Q8WV24 401 aaPredicted RBP13.06□□□□□ -0.32
CHMP2A-203ENST00000597209 C9orf170A2RU37 121 aa13.05□□□□□ -0.32
CHMP2A-203ENST00000597209 SNRPGP15A8MWD9 76 aa13.05□□□□□ -0.32
CHMP2A-203ENST00000597209 PRSS46E5RG02 174 aa13.05□□□□□ -0.32
CHMP2A-203ENST00000597209 CFDP00746 253 aaPredicted RBP13.05□□□□□ -0.32
CHMP2A-203ENST00000597209 PBDC1Q9BVG4 233 aa13.05□□□□□ -0.32
CHMP2A-203ENST00000597209 FBXL17Q9UF56 701 aa13.05□□□□□ -0.32
CHMP2A-203ENST00000597209 ZNF705EA8MWA4 302 aaPredicted RBP13.04□□□□□ -0.32
CHMP2A-203ENST00000597209 WRBO00258 174 aa13.04□□□□□ -0.32
CHMP2A-203ENST00000597209 C4BPBP20851 252 aa13.04□□□□□ -0.32
CHMP2A-203ENST00000597209 ID3Q02535 119 aa13.04□□□□□ -0.32
CHMP2A-203ENST00000597209 Q8NAQ8 132 aa13.04□□□□□ -0.32
CHMP2A-203ENST00000597209 SDHCQ99643 169 aaPredicted RBP13.04□□□□□ -0.32
CHMP2A-203ENST00000597209 C7orf50Q9BRJ6 194 aaKnown RBP13.04□□□□□ -0.32
CHMP2A-203ENST00000597209 MAGT1Q9H0U3 335 aa13.04□□□□□ -0.32
CHMP2A-203ENST00000597209 AGRNO00468 2067 aa13.03□□□□□ -0.32
CHMP2A-203ENST00000597209 IGKV1OR2-108A0A075B7D4 117 aa13.03□□□□□ -0.32
CHMP2A-203ENST00000597209 MIFP14174 115 aa13.03□□□□□ -0.32
CHMP2A-203ENST00000597209 NKX2-1P43699 371 aaPredicted RBP13.03□□□□□ -0.32
CHMP2A-203ENST00000597209 CNPY1Q3B7I2 92 aa13.03□□□□□ -0.32
CHMP2A-203ENST00000597209 CSNK1G2-AS1Q8NCQ2 148 aa13.03□□□□□ -0.32
CHMP2A-203ENST00000597209 COQ8AQ8NI60 647 aa13.03□□□□□ -0.32
CHMP2A-203ENST00000597209 HRH4Q9H3N8 390 aa13.03□□□□□ -0.32
CHMP2A-203ENST00000597209 PAIP2BQ9ULR5 123 aaKnown RBP13.03□□□□□ -0.32
CHMP2A-203ENST00000597209 CENPXA8MT69 81 aa13.02□□□□□ -0.33
CHMP2A-203ENST00000597209 H3BMM0 161 aa13.02□□□□□ -0.33
CHMP2A-203ENST00000597209 LY6G6CO95867 125 aa13.02□□□□□ -0.33
CHMP2A-203ENST00000597209 NANOS2P60321 138 aaKnown RBP13.02□□□□□ -0.33
CHMP2A-203ENST00000597209 LYZP61626 148 aa13.02□□□□□ -0.33
CHMP2A-203ENST00000597209 NUTF2P61970 127 aaKnown RBP13.02□□□□□ -0.33
CHMP2A-203ENST00000597209 C1QTNF4Q9BXJ3 329 aa13.02□□□□□ -0.33
CHMP2A-203ENST00000597209 SLC45A2Q9UMX9 530 aa13.02□□□□□ -0.33
CHMP2A-203ENST00000597209 FLVCR2Q9UPI3 526 aa13.02□□□□□ -0.33
CHMP2A-203ENST00000597209 ADAP1O75689 374 aa13.01□□□□□ -0.33
CHMP2A-203ENST00000597209 OR4E1P0C645 316 aa13.01□□□□□ -0.33
CHMP2A-203ENST00000597209 HLA-DRB4P13762 266 aa13.01□□□□□ -0.33
CHMP2A-203ENST00000597209 ID1P41134 155 aa13.01□□□□□ -0.33
CHMP2A-203ENST00000597209 OR2F1Q13607 317 aa13.01□□□□□ -0.33
CHMP2A-203ENST00000597209 SPANXN5Q5MJ07 72 aa13.01□□□□□ -0.33
CHMP2A-203ENST00000597209 NDUFA13Q9P0J0 144 aa13.01□□□□□ -0.33
CHMP2A-203ENST00000597209 STRAPQ9Y3F4 350 aaKnown RBP13.01□□□□□ -0.33
CHMP2A-203ENST00000597209 HLA-DRB4X5D2U9 266 aa13.01□□□□□ -0.33
CHMP2A-203ENST00000597209 X6R8D5 127 aa13.01□□□□□ -0.33
CHMP2A-203ENST00000597209 IGHV4-28A0A0C4DH34 117 aa13□□□□□ -0.33
CHMP2A-203ENST00000597209 SOCS3O14543 225 aa13□□□□□ -0.33
CHMP2A-203ENST00000597209 DEFB4AO15263 64 aa13□□□□□ -0.33
CHMP2A-203ENST00000597209 IFNA21P01568 189 aa13□□□□□ -0.33
CHMP2A-203ENST00000597209 BTCP35070 178 aa13□□□□□ -0.33
CHMP2A-203ENST00000597209 OR4D5Q8NGN0 318 aa13□□□□□ -0.33
CHMP2A-203ENST00000597209 RBMY1A1P0DJD3 496 aaKnown RBP12.99□□□□□ -0.33
CHMP2A-203ENST00000597209 RBMY1CP0DJD4 496 aa12.99□□□□□ -0.33
CHMP2A-203ENST00000597209 IL7P13232 177 aa12.99□□□□□ -0.33
CHMP2A-203ENST00000597209 PSMB3P49720 205 aa12.99□□□□□ -0.33
CHMP2A-203ENST00000597209 TCTAP57738 103 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms