RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 SLC35B3Q9H1N7 401 aa7.05□□□□□ -1.28
LIG1-209ENST00000596104 HEYLQ9NQ87 328 aaPredicted RBP7.05□□□□□ -1.28
LIG1-209ENST00000596104 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.05□□□□□ -1.28
LIG1-209ENST00000596104 CACNG5Q9UF02 275 aa7.05□□□□□ -1.28
LIG1-209ENST00000596104 YTHDF2Q9Y5A9 579 aaKnown RBP7.05□□□□□ -1.28
LIG1-209ENST00000596104 C16orf90A8MZG2 172 aa7.04□□□□□ -1.28
LIG1-209ENST00000596104 HPGDSO60760 199 aa7.04□□□□□ -1.28
LIG1-209ENST00000596104 ATP6V1G2O95670 118 aa7.04□□□□□ -1.28
LIG1-209ENST00000596104 OR5AC1P0C628 307 aa7.04□□□□□ -1.28
LIG1-209ENST00000596104 TBPP20226 339 aa7.04□□□□□ -1.28
LIG1-209ENST00000596104 NCS1P62166 190 aa7.04□□□□□ -1.28
LIG1-209ENST00000596104 RNASE12Q5GAN4 147 aaKnown RBP7.04□□□□□ -1.28
LIG1-209ENST00000596104 NMSQ5H8A3 153 aa7.04□□□□□ -1.28
LIG1-209ENST00000596104 ETFRF1Q6IPR1 90 aa7.04□□□□□ -1.28
LIG1-209ENST00000596104 OR52I2Q8NH67 350 aa7.04□□□□□ -1.28
LIG1-209ENST00000596104 TERB2Q8NHR7 220 aa7.04□□□□□ -1.28
LIG1-209ENST00000596104 ZFAND1Q8TCF1 268 aa7.04□□□□□ -1.28
LIG1-209ENST00000596104 GPR146Q96CH1 333 aa7.04□□□□□ -1.28
LIG1-209ENST00000596104 ACY3Q96HD9 319 aa7.04□□□□□ -1.28
LIG1-209ENST00000596104 MTFP1Q9UDX5 166 aa7.04□□□□□ -1.28
LIG1-209ENST00000596104 LRP1BQ9NZR2 4599 aa7.04□□□□□ -1.28
LIG1-209ENST00000596104 LOC102723971A0A1B0GUV8 181 aa7.03□□□□□ -1.28
LIG1-209ENST00000596104 CEBPZOSA8MTT3 80 aa7.03□□□□□ -1.28
LIG1-209ENST00000596104 HBE1P02100 147 aa7.03□□□□□ -1.28
LIG1-209ENST00000596104 NUP62P37198 522 aaPredicted RBP7.03□□□□□ -1.28
LIG1-209ENST00000596104 PSMB3P49720 205 aa7.03□□□□□ -1.28
LIG1-209ENST00000596104 PAX9P55771 341 aa7.03□□□□□ -1.28
LIG1-209ENST00000596104 FAM3BP58499 235 aaPredicted RBP7.03□□□□□ -1.28
LIG1-209ENST00000596104 PSG9Q00887 426 aa7.03□□□□□ -1.28
LIG1-209ENST00000596104 SPATA31B1PQ5VZV4 182 aa7.03□□□□□ -1.28
LIG1-209ENST00000596104 OR8G2PQ6IF36 304 aa7.03□□□□□ -1.28
LIG1-209ENST00000596104 GSG1LQ6UXU4 331 aa7.03□□□□□ -1.28
LIG1-209ENST00000596104 SELENOHQ8IZQ5 122 aaKnown RBP7.03□□□□□ -1.28
LIG1-209ENST00000596104 OR4B1Q8NGF8 309 aa7.03□□□□□ -1.28
LIG1-209ENST00000596104 MARCH1Q8TCQ1 289 aa7.03□□□□□ -1.28
LIG1-209ENST00000596104 RBPMSQ93062 196 aaKnown RBP7.03□□□□□ -1.28
LIG1-209ENST00000596104 RNF125Q96EQ8 232 aa7.03□□□□□ -1.28
LIG1-209ENST00000596104 LINC00052Q96N35 136 aa7.03□□□□□ -1.28
LIG1-209ENST00000596104 ABHD1Q96SE0 405 aa7.03□□□□□ -1.28
LIG1-209ENST00000596104 RTBDNQ9BSG5 229 aaPredicted RBP7.03□□□□□ -1.28
LIG1-209ENST00000596104 GOLT1BQ9Y3E0 138 aa7.03□□□□□ -1.28
LIG1-209ENST00000596104 IGKV1D-37A0A075B6S9 117 aa7.02□□□□□ -1.29
LIG1-209ENST00000596104 A0A0J9YX75 114 aa7.02□□□□□ -1.29
LIG1-209ENST00000596104 TEX13DA0A0J9YY54 714 aaPredicted RBP7.02□□□□□ -1.29
LIG1-209ENST00000596104 A8MTW9 85 aa7.02□□□□□ -1.29
LIG1-209ENST00000596104 F6UB75 175 aa7.02□□□□□ -1.29
LIG1-209ENST00000596104 ID1P41134 155 aa7.02□□□□□ -1.29
LIG1-209ENST00000596104 RORCP51449 518 aa7.02□□□□□ -1.29
LIG1-209ENST00000596104 DAD1P61803 113 aa7.02□□□□□ -1.29
LIG1-209ENST00000596104 MEF2DQ14814 521 aa7.02□□□□□ -1.29
LIG1-209ENST00000596104 RRN3P1Q2M238 152 aa7.02□□□□□ -1.29
LIG1-209ENST00000596104 SCGB2B2Q4G0G5 96 aa7.02□□□□□ -1.29
LIG1-209ENST00000596104 C1orf194Q5T5A4 169 aa7.02□□□□□ -1.29
LIG1-209ENST00000596104 FAM78BQ5VT40 261 aa7.02□□□□□ -1.29
LIG1-209ENST00000596104 NOXA1Q86UR1 476 aa7.02□□□□□ -1.29
LIG1-209ENST00000596104 MAPKAPK5-AS1Q8N8E1 139 aa7.02□□□□□ -1.29
LIG1-209ENST00000596104 C15orf53Q8NAA6 179 aa7.02□□□□□ -1.29
LIG1-209ENST00000596104 ZNRF2Q8NHG8 242 aa7.02□□□□□ -1.29
LIG1-209ENST00000596104 PBDC1Q9BVG4 233 aa7.02□□□□□ -1.29
LIG1-209ENST00000596104 NAA60Q9H7X0 242 aa7.02□□□□□ -1.29
LIG1-209ENST00000596104 NBDYA0A0U1RRE5 68 aa7.01□□□□□ -1.29
LIG1-209ENST00000596104 ISLRO14498 428 aa7.01□□□□□ -1.29
LIG1-209ENST00000596104 RAB3DO95716 219 aa7.01□□□□□ -1.29
LIG1-209ENST00000596104 ALDH3B2P48448 385 aa7.01□□□□□ -1.29
LIG1-209ENST00000596104 VBP1P61758 197 aa7.01□□□□□ -1.29
LIG1-209ENST00000596104 SUPT4H1P63272 117 aaKnown RBP7.01□□□□□ -1.29
LIG1-209ENST00000596104 ZNF90Q03938 601 aa7.01□□□□□ -1.29
LIG1-209ENST00000596104 KLF9Q13886 244 aaPredicted RBP7.01□□□□□ -1.29
LIG1-209ENST00000596104 TMEM268Q5VZI3 342 aa7.01□□□□□ -1.29
LIG1-209ENST00000596104 AMTNQ6UX39 209 aa7.01□□□□□ -1.29
LIG1-209ENST00000596104 TMEM229BQ8NBD8 167 aa7.01□□□□□ -1.29
LIG1-209ENST00000596104 COQ8AQ8NI60 647 aa7.01□□□□□ -1.29
LIG1-209ENST00000596104 C7orf50Q9BRJ6 194 aaKnown RBP7.01□□□□□ -1.29
LIG1-209ENST00000596104 PFDN2Q9UHV9 154 aa7.01□□□□□ -1.29
LIG1-209ENST00000596104 TMED3Q9Y3Q3 217 aa7.01□□□□□ -1.29
LIG1-209ENST00000596104 NACAE9PAV3 2078 aa7□□□□□ -1.29
LIG1-209ENST00000596104 CRYM-AS1A6NIL9 109 aa7□□□□□ -1.29
LIG1-209ENST00000596104 FAM25AB3EWG3 89 aa7□□□□□ -1.29
LIG1-209ENST00000596104 FAM25CB3EWG5 89 aa7□□□□□ -1.29
LIG1-209ENST00000596104 FAM25GB3EWG6 89 aa7□□□□□ -1.29
LIG1-209ENST00000596104 TNFAIP8O95379 198 aa7□□□□□ -1.29
LIG1-209ENST00000596104 TAS2R19P59542 299 aa7□□□□□ -1.29
LIG1-209ENST00000596104 GPR107Q5VW38 600 aa7□□□□□ -1.29
LIG1-209ENST00000596104 FAAP20Q6NZ36 180 aa7□□□□□ -1.29
LIG1-209ENST00000596104 STEAP1BQ6NZ63 245 aa7□□□□□ -1.29
LIG1-209ENST00000596104 EBLN2Q6P2I7 272 aa7□□□□□ -1.29
LIG1-209ENST00000596104 Q8N1X5 172 aa7□□□□□ -1.29
LIG1-209ENST00000596104 C6orf223Q8N319 242 aa7□□□□□ -1.29
LIG1-209ENST00000596104 C20orf173Q96LM9 149 aa7□□□□□ -1.29
LIG1-209ENST00000596104 IGF2BP2-AS1Q96M15 143 aa7□□□□□ -1.29
LIG1-209ENST00000596104 C17orf77Q96MU5 243 aa7□□□□□ -1.29
LIG1-209ENST00000596104 FUNDC2Q9BWH2 189 aa7□□□□□ -1.29
LIG1-209ENST00000596104 EXTL2Q9UBQ6 330 aa7□□□□□ -1.29
LIG1-209ENST00000596104 C14orf166Q9Y224 244 aaKnown RBP7□□□□□ -1.29
LIG1-209ENST00000596104 TMEM56-RWDD3S4R434 201 aa7□□□□□ -1.29
LIG1-209ENST00000596104 U3KQ87 197 aa7□□□□□ -1.29
LIG1-209ENST00000596104 A0A087WXM4 84 aa6.99□□□□□ -1.29
LIG1-209ENST00000596104 ZFP92A6NM28 416 aa6.99□□□□□ -1.29
LIG1-209ENST00000596104 CRXO43186 299 aaPredicted RBP6.99□□□□□ -1.29
LIG1-209ENST00000596104 PRM2P04554 102 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms