RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 M0R2N4 97 aa7.6□□□□□ -1.19
USE1-203ENST00000593597 CTDSP2O14595 271 aa7.6□□□□□ -1.19
USE1-203ENST00000593597 B3GALNT1O75752 331 aa7.6□□□□□ -1.19
USE1-203ENST00000593597 NPY1RP25929 384 aa7.6□□□□□ -1.19
USE1-203ENST00000593597 SUPT4H1P63272 117 aaKnown RBP7.6□□□□□ -1.19
USE1-203ENST00000593597 MZT2AQ6P582 158 aa7.6□□□□□ -1.19
USE1-203ENST00000593597 SIGLEC15Q6ZMC9 328 aa7.6□□□□□ -1.19
USE1-203ENST00000593597 LINC00336Q6ZUF6 198 aa7.6□□□□□ -1.19
USE1-203ENST00000593597 POM121L12Q8N7R1 296 aa7.6□□□□□ -1.19
USE1-203ENST00000593597 ACY3Q96HD9 319 aa7.6□□□□□ -1.19
USE1-203ENST00000593597 NARS2Q96I59 477 aaKnown RBP7.6□□□□□ -1.19
USE1-203ENST00000593597 NEU1Q99519 415 aa7.6□□□□□ -1.19
USE1-203ENST00000593597 PLA2G2EQ9NZK7 142 aa7.6□□□□□ -1.19
USE1-203ENST00000593597 TMEM56-RWDD3S4R434 201 aa7.6□□□□□ -1.19
USE1-203ENST00000593597 CEBPZOSA8MTT3 80 aa7.59□□□□□ -1.19
USE1-203ENST00000593597 IGKV3-20P01619 116 aa7.59□□□□□ -1.19
USE1-203ENST00000593597 ZNF90Q03938 601 aa7.59□□□□□ -1.19
USE1-203ENST00000593597 SPCS2Q15005 226 aa7.59□□□□□ -1.19
USE1-203ENST00000593597 Q6ZR54 194 aa7.59□□□□□ -1.19
USE1-203ENST00000593597 SMIM4Q8WVI0 70 aa7.59□□□□□ -1.19
USE1-203ENST00000593597 RNF125Q96EQ8 232 aa7.59□□□□□ -1.19
USE1-203ENST00000593597 KRTAP4-5Q9BYR2 181 aa7.59□□□□□ -1.19
USE1-203ENST00000593597 SEPSECSQ9HD40 501 aaKnown RBP7.59□□□□□ -1.19
USE1-203ENST00000593597 HSPB7Q9UBY9 170 aa7.59□□□□□ -1.19
USE1-203ENST00000593597 PRSS29PA6NIE9 313 aa7.58□□□□□ -1.2
USE1-203ENST00000593597 F6UB75 175 aa7.58□□□□□ -1.2
USE1-203ENST00000593597 RD3LP0DJH9 198 aa7.58□□□□□ -1.2
USE1-203ENST00000593597 NKX2-1P43699 371 aaPredicted RBP7.58□□□□□ -1.2
USE1-203ENST00000593597 AP2S1P53680 142 aaPredicted RBP7.58□□□□□ -1.2
USE1-203ENST00000593597 SNRPD3P62318 126 aaKnown RBP7.58□□□□□ -1.2
USE1-203ENST00000593597 SURF2Q15527 256 aaPredicted RBP7.58□□□□□ -1.2
USE1-203ENST00000593597 C1orf158Q8N1D5 194 aa7.58□□□□□ -1.2
USE1-203ENST00000593597 OR51S1Q8NGJ8 323 aa7.58□□□□□ -1.2
USE1-203ENST00000593597 AP3S1Q92572 193 aa7.58□□□□□ -1.2
USE1-203ENST00000593597 C20orf173Q96LM9 149 aa7.58□□□□□ -1.2
USE1-203ENST00000593597 NDUFAF3Q9BU61 184 aa7.58□□□□□ -1.2
USE1-203ENST00000593597 SLC35B3Q9H1N7 401 aa7.58□□□□□ -1.2
USE1-203ENST00000593597 RBKSQ9H477 322 aa7.58□□□□□ -1.2
USE1-203ENST00000593597 SAV1Q9H4B6 383 aaPredicted RBP7.58□□□□□ -1.2
USE1-203ENST00000593597 C14orf166Q9Y224 244 aaKnown RBP7.58□□□□□ -1.2
USE1-203ENST00000593597 IGLV2-18A0A075B6J9 118 aa7.57□□□□□ -1.2
USE1-203ENST00000593597 IGKV1OR2-108A0A075B7D4 117 aa7.57□□□□□ -1.2
USE1-203ENST00000593597 SCGB2A1O75556 95 aa7.57□□□□□ -1.2
USE1-203ENST00000593597 SULT1A3P0DMM9 295 aa7.57□□□□□ -1.2
USE1-203ENST00000593597 SULT1A4P0DMN0 295 aa7.57□□□□□ -1.2
USE1-203ENST00000593597 P0DMU3 169 aa7.57□□□□□ -1.2
USE1-203ENST00000593597 FAM231AP0DMU4 169 aa7.57□□□□□ -1.2
USE1-203ENST00000593597 FAM231CP0DMU5 169 aa7.57□□□□□ -1.2
USE1-203ENST00000593597 EIF2B2P49770 351 aaKnown RBP7.57□□□□□ -1.2
USE1-203ENST00000593597 EMP1P54849 157 aa7.57□□□□□ -1.2
USE1-203ENST00000593597 SSBP1Q04837 148 aaKnown RBP7.57□□□□□ -1.2
USE1-203ENST00000593597 GAMTQ14353 236 aa7.57□□□□□ -1.2
USE1-203ENST00000593597 ZNF79Q15937 498 aa7.57□□□□□ -1.2
USE1-203ENST00000593597 LGALS9BQ3B8N2 356 aa7.57□□□□□ -1.2
USE1-203ENST00000593597 LYZL2Q7Z4W2 148 aa7.57□□□□□ -1.2
USE1-203ENST00000593597 DTD1Q8TEA8 209 aa7.57□□□□□ -1.2
USE1-203ENST00000593597 IL22RA2Q969J5 263 aa7.57□□□□□ -1.2
USE1-203ENST00000593597 C1QTNF4Q9BXJ3 329 aa7.57□□□□□ -1.2
USE1-203ENST00000593597 DKK2Q9UBU2 259 aa7.57□□□□□ -1.2
USE1-203ENST00000593597 IGHV3OR16-12A0A075B7B8 117 aa7.56□□□□□ -1.2
USE1-203ENST00000593597 ANKRD20A5PA0PJZ0 165 aa7.56□□□□□ -1.2
USE1-203ENST00000593597 A8MTW9 85 aa7.56□□□□□ -1.2
USE1-203ENST00000593597 DISC1C4P0D8 188 aa7.56□□□□□ -1.2
USE1-203ENST00000593597 CTDSPLO15194 276 aa7.56□□□□□ -1.2
USE1-203ENST00000593597 AKAIN1P0CW23 69 aa7.56□□□□□ -1.2
USE1-203ENST00000593597 ALDH3B2P48448 385 aa7.56□□□□□ -1.2
USE1-203ENST00000593597 FAM222AQ5U5X8 452 aa7.56□□□□□ -1.2
USE1-203ENST00000593597 OR8G2PQ6IF36 304 aa7.56□□□□□ -1.2
USE1-203ENST00000593597 ETFRF1Q6IPR1 90 aa7.56□□□□□ -1.2
USE1-203ENST00000593597 AMTNQ6UX39 209 aa7.56□□□□□ -1.2
USE1-203ENST00000593597 FOXI2Q6ZQN5 318 aa7.56□□□□□ -1.2
USE1-203ENST00000593597 ZNF575Q86XF7 245 aa7.56□□□□□ -1.2
USE1-203ENST00000593597 PBDC1Q9BVG4 233 aa7.56□□□□□ -1.2
USE1-203ENST00000593597 PRSS46E5RG02 174 aa7.55□□□□□ -1.2
USE1-203ENST00000593597 GSTZ1O43708 216 aaPredicted RBP7.55□□□□□ -1.2
USE1-203ENST00000593597 PITX3O75364 302 aa7.55□□□□□ -1.2
USE1-203ENST00000593597 IFNA10P01566 189 aa7.55□□□□□ -1.2
USE1-203ENST00000593597 PRM2P04554 102 aa7.55□□□□□ -1.2
USE1-203ENST00000593597 SPART-AS1P0CW21 52 aa7.55□□□□□ -1.2
USE1-203ENST00000593597 MED14OSP0DP75 135 aa7.55□□□□□ -1.2
USE1-203ENST00000593597 PSMB3P49720 205 aa7.55□□□□□ -1.2
USE1-203ENST00000593597 PAX9P55771 341 aa7.55□□□□□ -1.2
USE1-203ENST00000593597 NUTF2P61970 127 aaKnown RBP7.55□□□□□ -1.2
USE1-203ENST00000593597 MRPS10P82664 201 aaKnown RBP7.55□□□□□ -1.2
USE1-203ENST00000593597 OR2F1Q13607 317 aa7.55□□□□□ -1.2
USE1-203ENST00000593597 KLF9Q13886 244 aaPredicted RBP7.55□□□□□ -1.2
USE1-203ENST00000593597 SMCO1Q147U7 214 aa7.55□□□□□ -1.2
USE1-203ENST00000593597 TMEM182Q6ZP80 229 aaPredicted RBP7.55□□□□□ -1.2
USE1-203ENST00000593597 CLVS1Q8IUQ0 354 aaPredicted RBP7.55□□□□□ -1.2
USE1-203ENST00000593597 LGI3Q8N145 548 aa7.55□□□□□ -1.2
USE1-203ENST00000593597 LINC00052Q96N35 136 aa7.55□□□□□ -1.2
USE1-203ENST00000593597 CLUHP3Q96NS8 147 aa7.55□□□□□ -1.2
USE1-203ENST00000593597 A0A0B4J2A0 478 aa7.54□□□□□ -1.2
USE1-203ENST00000593597 A0A0J9YX75 114 aa7.54□□□□□ -1.2
USE1-203ENST00000593597 SMIM9A6NGZ8 99 aa7.54□□□□□ -1.2
USE1-203ENST00000593597 RGS5O15539 181 aa7.54□□□□□ -1.2
USE1-203ENST00000593597 CCR6P51684 374 aa7.54□□□□□ -1.2
USE1-203ENST00000593597 LYZP61626 148 aa7.54□□□□□ -1.2
USE1-203ENST00000593597 FAM78BQ5VT40 261 aa7.54□□□□□ -1.2
USE1-203ENST00000593597 OR4B1Q8NGF8 309 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms